FFCP PHASE1:Mm9::chr19:33034620..33034661,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:33034620..33034661,+
|short_description=p@chr19:33034620..33034661,+
|description=CAGE_peak_at_chr19:33034620..33034661,+
|association_with_transcript=NA
...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=166 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:33034620..33034661,+ | |||
|description=CAGE_peak_at_chr19:33034620..33034661,+ | |||
|id=chr19:33034620..33034661,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.09e-10!9;CL:0002251!7.09e-10!9;CL:0000066!8.09e-09!25;CL:0000239!4.73e-08!6;CL:0000677!4.73e-08!6;CL:0000212!4.73e-08!6;CL:0000584!4.73e-08!6;CL:0000223!2.07e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.69e-13,6;CL:0000677,2.69e-13,6;CL:0000584,2.69e-13,6;CL:0000075,2.34e-11,7;CL:0000682,1.79e-09,3;CL:0002563,9.11e-09,9;CL:0002251,9.11e-09,9;CL:0000066,9.19e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.53e-18!59;UBERON:0000160!1.30e-17!43;UBERON:0000344!9.19e-16!15;UBERON:0001007!5.46e-15!128;UBERON:0001555!5.46e-15!128;UBERON:0007026!5.46e-15!128;UBERON:0004119!1.69e-14!130;UBERON:0000925!1.69e-14!130;UBERON:0006595!1.69e-14!130;UBERON:0001242!7.60e-14!13;UBERON:0000060!7.60e-14!13;UBERON:0001262!7.60e-14!13;UBERON:0004786!7.60e-14!13;UBERON:0004921!1.20e-13!126;UBERON:0004185!1.20e-13!126;UBERON:0004923!1.07e-11!24;UBERON:0003350!7.09e-10!9;UBERON:0004808!7.09e-10!9;UBERON:0001277!7.09e-10!9;UBERON:0002107!4.08e-09!22;UBERON:0007499!4.08e-09!22;UBERON:0006925!4.08e-09!22;UBERON:0009497!4.08e-09!22;UBERON:0000015!4.08e-09!22;UBERON:0002423!4.08e-09!22;UBERON:0006235!4.08e-09!22;UBERON:0008835!4.08e-09!22;UBERON:0003894!4.08e-09!22;UBERON:0004161!4.08e-09!22;UBERON:0008836!4.08e-09!22;UBERON:0009854!1.59e-08!23;UBERON:0009856!1.59e-08!23;UBERON:0000485!1.21e-07!11;UBERON:0003929!1.57e-07!55;UBERON:0002365!1.71e-07!25;UBERON:0002330!1.71e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.21e-22,31;UBERON:0005409,6.03e-16,47;UBERON:0000344,2.16e-15,15;UBERON:0001242,1.95e-14,13;UBERON:0001262,1.95e-14,13;UBERON:0004786,1.95e-14,13;UBERON:0001007,1.04e-13,116;UBERON:0001555,1.04e-13,116;UBERON:0007026,1.04e-13,116;UBERON:0004119,2.17e-13,118;UBERON:0000925,2.17e-13,118;UBERON:0006595,2.17e-13,118;UBERON:0004921,9.05e-13,114;UBERON:0004923,4.71e-09,24;UBERON:0003350,9.11e-09,9;UBERON:0004808,9.11e-09,9;UBERON:0001277,9.11e-09,9;UBERON:0002107,3.51e-08,22;UBERON:0007499,3.51e-08,22;UBERON:0006925,3.51e-08,22;UBERON:0009497,3.51e-08,22;UBERON:0000015,3.51e-08,22;UBERON:0002423,3.51e-08,22;UBERON:0006235,3.51e-08,22;UBERON:0008835,3.51e-08,22;UBERON:0003894,3.51e-08,22;UBERON:0004161,3.51e-08,22;UBERON:0008836,3.51e-08,22;UBERON:0009854,9.03e-08,23;UBERON:0009856,9.03e-08,23;UBERON:0003929,2.66e-07,55;UBERON:0000485,4.09e-07,11;UBERON:0002365,4.75e-07,25;UBERON:0002330,4.75e-07,25 | |||
|phase1_expression=0,2.44282785347553,1.81999695755814,3.62957053568196,2.50447864973174,1.84667199103079,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.84877930359606,0,0,0,0.95995453676044,1.14704640533585,2.29692785646008,1.7230479846363,1.07735616342945,1.33016393619462,1.51218077855958,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0.679971333707751,3.77792234146472,0.649776417447669,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.43785736662608,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,1.42358718463353,0.988193728344065,0.754005626400808,1.1937388322469,1.55971269695296,3.59527763461689,1.94524244887225,1.7922714592893,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0.156998727841375,0.370191491765402,1.77871576252289,0,0,0.224862112384854,0,0,0,0.575392274901621,0.162135226775035,0,5.75072826109418,0.744281895337007,2.49630138491648,2.52578877947112,1.61457672169721,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0.185194527369712,0.188368457004691,0.546776910884101,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0.247960367176008,0.26175594198403,5.31421390496351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0.252697211763798,0,0,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,2.44282785347553,1.81999695755814,3.62957053568196,2.50447864973174,1.84667199103079,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0.84877930359606,0,0,0,0.95995453676044,1.14704640533585,2.29692785646008,1.7230479846363,1.07735616342945,1.33016393619462,1.51218077855958,0.443461021310609,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0.418531630736908,0.7813353445238,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,0.679971333707751,3.77792234146472,0.649776417447669,0.448026887097336,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.43785736662608,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,1.42358718463353,0.988193728344065,0.754005626400808,1.1937388322469,1.55971269695296,3.59527763461689,1.94524244887225,1.7922714592893,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0.156998727841375,0.370191491765402,1.77871576252289,0,0,0.224862112384854,0,0,0,0.575392274901621,0.162135226775035,0,5.75072826109418,0.744281895337007,2.49630138491648,2.52578877947112,1.61457672169721,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0.185194527369712,0.188368457004691,0.546776910884101,0,0,0,0,0,0,0,0.216010681643603,0,0.218362563746178,0,0.247960367176008,0.26175594198403,5.31421390496351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64183841918363,0.252697211763798,0,0,0,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.188218760830661,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr19:33034620..33034661,+ | |||
}} | }} |
Latest revision as of 22:21, 3 August 2015
Short description: | p@chr19:33034620..33034661, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:33034620..33034661, + |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.69e-13 | 6 |
gut absorptive cell | 2.69e-13 | 6 |
enterocyte | 2.69e-13 | 6 |
columnar/cuboidal epithelial cell | 2.34e-11 | 7 |
M cell of gut | 1.79e-09 | 3 |
intestinal epithelial cell | 9.11e-09 | 9 |
epithelial cell of alimentary canal | 9.11e-09 | 9 |
epithelial cell | 9.19e-09 | 25 |