FFCP PHASE1:Mm9::chr17:28984921..28984925,+: Difference between revisions
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|id=chr17:28984921..28984925,+
|short_description=p@chr17:28984921..28984925,+
|description=CAGE_peak_at_chr17:28984921..28984925,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=412 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:28984921..28984925,+ | |||
|description=CAGE_peak_at_chr17:28984921..28984925,+ | |||
|id=chr17:28984921..28984925,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.03e-15!9;CL:0002251!2.03e-15!9;CL:0000239!2.05e-10!6;CL:0000677!2.05e-10!6;CL:0000212!2.05e-10!6;CL:0000584!2.05e-10!6;CL:0000075!8.91e-09!7;CL:0002076!2.37e-08!15;CL:0000066!1.22e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.14e-27,9;CL:0002251,1.14e-27,9;CL:0000239,3.19e-18,6;CL:0000677,3.19e-18,6;CL:0000584,3.19e-18,6;CL:0002076,5.52e-16,15;CL:0000075,1.53e-15,7;CL:0000066,2.65e-13,25;CL:0000223,1.34e-11,20;CL:0002250,4.94e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.79e-32!43;UBERON:0005409!8.59e-29!59;UBERON:0000344!2.36e-23!15;UBERON:0001242!1.61e-20!13;UBERON:0000060!1.61e-20!13;UBERON:0001262!1.61e-20!13;UBERON:0004786!1.61e-20!13;UBERON:0003350!2.03e-15!9;UBERON:0004808!2.03e-15!9;UBERON:0001277!2.03e-15!9;UBERON:0004923!5.91e-13!24;UBERON:0000485!3.39e-12!11;UBERON:0001007!1.69e-09!128;UBERON:0001555!1.69e-09!128;UBERON:0007026!1.69e-09!128;UBERON:0004119!3.37e-09!130;UBERON:0000925!3.37e-09!130;UBERON:0006595!3.37e-09!130;UBERON:0004921!3.24e-08!126;UBERON:0004185!3.24e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.33e-54,31;UBERON:0000344,9.37e-38,15;UBERON:0005409,9.47e-38,47;UBERON:0001242,2.06e-32,13;UBERON:0001262,2.06e-32,13;UBERON:0004786,2.06e-32,13;UBERON:0003350,1.14e-27,9;UBERON:0004808,1.14e-27,9;UBERON:0001277,1.14e-27,9;UBERON:0004923,1.54e-22,24;UBERON:0000485,2.32e-22,11;UBERON:0001007,4.33e-15,116;UBERON:0001555,4.33e-15,116;UBERON:0007026,4.33e-15,116;UBERON:0004119,9.49e-15,118;UBERON:0000925,9.49e-15,118;UBERON:0006595,9.49e-15,118;UBERON:0004921,9.34e-13,114;UBERON:0002108,1.05e-11,4;UBERON:0000331,4.03e-09,3;UBERON:0002116,4.03e-09,3;UBERON:0001204,4.03e-09,3;UBERON:0001168,4.03e-09,3;UBERON:0001155,1.35e-07,2;UBERON:0000059,1.35e-07,2;UBERON:0001962,8.62e-07,2;UBERON:0001961,8.62e-07,2;UBERON:0001744,8.62e-07,2 | |||
|phase1_expression=0,1.39590163055744,2.27499619694768,4.53696316960245,1.50268718983904,4.19698179779725,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.06468352960453,2.29692785646008,0.86152399231815,1.07735616342945,1.33016393619462,2.01624103807945,1.33038306393183,0,0,0,7.22129049378186,3.32469290716985,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.64450566663544,0.426576501070468,0.696710015581316,2.70621668776396,5.64713868945359,3.11329261382818,4.56541502670142,0.949058123089023,0.658795818896044,1.50801125280162,0.397912944082302,0.779856348476481,2.69645822596266,4.10662294761919,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,0.218362563746178,0,0,0,2.98114438571124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.543216455383447,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,2.27499619694768,4.53696316960245,1.50268718983904,4.19698179779725,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,2.06468352960453,2.29692785646008,0.86152399231815,1.07735616342945,1.33016393619462,2.01624103807945,1.33038306393183,0,0,0,7.22129049378186,3.32469290716985,4.90006455029686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.64450566663544,0.426576501070468,0.696710015581316,2.70621668776396,5.64713868945359,3.11329261382818,4.56541502670142,0.949058123089023,0.658795818896044,1.50801125280162,0.397912944082302,0.779856348476481,2.69645822596266,4.10662294761919,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0.209088296014469,0.218362563746178,0,0,0,2.98114438571124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.280924522409647,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.192909220463705,0,0.294397840268795,0.342869252385415,0.354951612318675,0,0.290692833264657,0.282328141245992,0.0846146078916765,0.548783918618318,0,0.543216455383447,0,0,0.29551344712669,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:28984921..28984925,+ | |||
}} | }} |
Latest revision as of 13:27, 4 August 2015
Short description: | p@chr17:28984921..28984925, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:28984921..28984925, + |
Coexpression cluster: | MCL_coexpression_mm9:412 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.14e-27 | 9 |
epithelial cell of alimentary canal | 1.14e-27 | 9 |
brush border epithelial cell | 3.19e-18 | 6 |
gut absorptive cell | 3.19e-18 | 6 |
enterocyte | 3.19e-18 | 6 |
endo-epithelial cell | 5.52e-16 | 15 |
columnar/cuboidal epithelial cell | 1.53e-15 | 7 |
epithelial cell | 2.65e-13 | 25 |
endodermal cell | 1.34e-11 | 20 |
intestinal crypt stem cell | 4.94e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.33e-54 | 31 |
mucosa | 9.37e-38 | 15 |
gastrointestinal system | 9.47e-38 | 47 |
intestinal mucosa | 2.06e-32 | 13 |
wall of intestine | 2.06e-32 | 13 |
gastrointestinal system mucosa | 2.06e-32 | 13 |
epithelium of mucosa | 1.14e-27 | 9 |
gastrointestinal system epithelium | 1.14e-27 | 9 |
intestinal epithelium | 1.14e-27 | 9 |
organ component layer | 1.54e-22 | 24 |
simple columnar epithelium | 2.32e-22 | 11 |
digestive system | 4.33e-15 | 116 |
digestive tract | 4.33e-15 | 116 |
primitive gut | 4.33e-15 | 116 |
endoderm-derived structure | 9.49e-15 | 118 |
endoderm | 9.49e-15 | 118 |
presumptive endoderm | 9.49e-15 | 118 |
subdivision of digestive tract | 9.34e-13 | 114 |
small intestine | 1.05e-11 | 4 |
ileal mucosa | 4.03e-09 | 3 |
ileum | 4.03e-09 | 3 |
mucosa of small intestine | 4.03e-09 | 3 |
wall of small intestine | 4.03e-09 | 3 |
colon | 1.35e-07 | 2 |
large intestine | 1.35e-07 | 2 |
gut-associated lymphoid tissue | 8.62e-07 | 2 |
mucosa-associated lymphoid tissue | 8.62e-07 | 2 |
lymphoid tissue | 8.62e-07 | 2 |