FFCP PHASE2:Hg19::chr10:101292684..101292706,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:159296 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7836 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=159296 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7836 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8TAU0 | ||
|association_with_transcript=0bp_to_ENST00000344586,NM_145285,uc009xwj.2_5end | |association_with_transcript=0bp_to_ENST00000344586,NM_145285,uc009xwj.2_5end | ||
|cluster_id=chr10:101292684..101292706,+ | |cluster_id=chr10:101292684..101292706,+ |
Latest revision as of 18:46, 15 September 2015
Short description: | p1@NKX2-3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344586, NM_145285, uc009xwj.2_5end |
EntrezGene: | NKX2-3 |
HGNC: | 7836 |
UniProt: | Q8TAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NKX2-3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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enteric smooth muscle cell | 2.92e-16 | 3 |
smooth muscle cell of large intestine | 2.92e-16 | 3 |
smooth muscle cell of colon | 2.92e-16 | 3 |
fibroblast of lymphatic vessel | 1.79e-11 | 2 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
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gastrointestinal system | 3.01e-42 | 25 |
intestine | 9.26e-40 | 17 |
large intestine | 2.04e-29 | 11 |
colon | 1.13e-27 | 9 |
small intestine | 4.27e-10 | 4 |
digestive system | 1.31e-09 | 145 |
digestive tract | 1.31e-09 | 145 |
primitive gut | 1.31e-09 | 145 |
subdivision of digestive tract | 7.34e-09 | 118 |
endoderm-derived structure | 2.60e-08 | 160 |
Showing 1 to 10 of 23 entries