FFCP PHASE1:Mm9::chr12:111682926..111682958,+: Difference between revisions
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|id=chr12:111682926..111682958,+
|short_description=p@chr12:111682926..111682958,+
|description=CAGE_peak_at_chr12:111682926..111682958,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:111682926..111682958,+ | |||
|description=CAGE_peak_at_chr12:111682926..111682958,+ | |||
|id=chr12:111682926..111682958,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.01e-18!9;CL:0002251!2.01e-18!9;CL:0000239!3.74e-13!6;CL:0000677!3.74e-13!6;CL:0000212!3.74e-13!6;CL:0000584!3.74e-13!6;CL:0000075!3.98e-11!7;CL:0002076!3.38e-10!15;CL:0000066!6.80e-10!25;CL:0000473!3.70e-07!3;CL:0000627!3.70e-07!3;CL:0000682!3.70e-07!3;CL:0000223!3.86e-07!20;CL:0002250!7.59e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.18e-28,9;CL:0002251,5.18e-28,9;CL:0000239,9.94e-20,6;CL:0000677,9.94e-20,6;CL:0000584,9.94e-20,6;CL:0000075,8.18e-17,7;CL:0000066,2.06e-16,25;CL:0002076,3.74e-16,15;CL:0000223,1.05e-11,20;CL:0000682,2.43e-10,3;CL:0002250,7.46e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!9.79e-35!43;UBERON:0000344!1.59e-28!15;UBERON:0005409!2.10e-28!59;UBERON:0001242!3.05e-25!13;UBERON:0000060!3.05e-25!13;UBERON:0001262!3.05e-25!13;UBERON:0004786!3.05e-25!13;UBERON:0003350!2.01e-18!9;UBERON:0004808!2.01e-18!9;UBERON:0001277!2.01e-18!9;UBERON:0004923!2.96e-16!24;UBERON:0000485!1.11e-14!11;UBERON:0001007!2.89e-10!128;UBERON:0001555!2.89e-10!128;UBERON:0007026!2.89e-10!128;UBERON:0004119!5.65e-10!130;UBERON:0000925!5.65e-10!130;UBERON:0006595!5.65e-10!130;UBERON:0004921!8.04e-09!126;UBERON:0004185!8.04e-09!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.86e-52,31;UBERON:0000344,6.42e-44,15;UBERON:0001242,9.57e-39,13;UBERON:0001262,9.57e-39,13;UBERON:0004786,9.57e-39,13;UBERON:0005409,1.10e-35,47;UBERON:0003350,5.18e-28,9;UBERON:0004808,5.18e-28,9;UBERON:0001277,5.18e-28,9;UBERON:0004923,2.95e-26,24;UBERON:0000485,1.26e-22,11;UBERON:0001007,5.12e-14,116;UBERON:0001555,5.12e-14,116;UBERON:0007026,5.12e-14,116;UBERON:0004119,1.08e-13,118;UBERON:0000925,1.08e-13,118;UBERON:0006595,1.08e-13,118;UBERON:0002108,6.93e-12,4;UBERON:0004921,8.10e-12,114;UBERON:0000331,3.10e-09,3;UBERON:0002116,3.10e-09,3;UBERON:0001204,3.10e-09,3;UBERON:0001168,3.10e-09,3;UBERON:0001155,4.79e-07,2;UBERON:0000059,4.79e-07,2 | |||
|phase1_expression=0,20.2405736430829,15.4699741392442,35.9932411455128,41.0734498556005,4.19698179779725,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.60586496747019,12.0588712464154,4.30761996159075,6.03319451520489,2.47030445293286,2.52030129759931,1.33038306393183,0,0,0,12.1317680295535,1.66234645358492,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0.209446706813455,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,5.02456076660734,0,0,0.38660238396628,0.201683524623343,1.11189021922435,0.380451252225118,1.42358718463353,0.988193728344065,1.00534083520108,0.795825888164603,1.16978452271472,3.59527763461689,1.72910439899755,3.18626037206988,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,20.2405736430829,15.4699741392442,35.9932411455128,41.0734498556005,4.19698179779725,6.77476657727024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75991665072747,1.60586496747019,12.0588712464154,4.30761996159075,6.03319451520489,2.47030445293286,2.52030129759931,1.33038306393183,0,0,0,12.1317680295535,1.66234645358492,3.87921776898501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0.209446706813455,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,5.02456076660734,0,0,0.38660238396628,0.201683524623343,1.11189021922435,0.380451252225118,1.42358718463353,0.988193728344065,1.00534083520108,0.795825888164603,1.16978452271472,3.59527763461689,1.72910439899755,3.18626037206988,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,1.16653475962614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr12:111682926..111682958,+ | |||
}} | }} |
Latest revision as of 17:40, 4 August 2015
Short description: | p@chr12:111682926..111682958, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:111682926..111682958, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.18e-28 | 9 |
epithelial cell of alimentary canal | 5.18e-28 | 9 |
brush border epithelial cell | 9.94e-20 | 6 |
gut absorptive cell | 9.94e-20 | 6 |
enterocyte | 9.94e-20 | 6 |
columnar/cuboidal epithelial cell | 8.18e-17 | 7 |
epithelial cell | 2.06e-16 | 25 |
endo-epithelial cell | 3.74e-16 | 15 |
endodermal cell | 1.05e-11 | 20 |
M cell of gut | 2.43e-10 | 3 |
intestinal crypt stem cell | 7.46e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.86e-52 | 31 |
mucosa | 6.42e-44 | 15 |
intestinal mucosa | 9.57e-39 | 13 |
wall of intestine | 9.57e-39 | 13 |
gastrointestinal system mucosa | 9.57e-39 | 13 |
gastrointestinal system | 1.10e-35 | 47 |
epithelium of mucosa | 5.18e-28 | 9 |
gastrointestinal system epithelium | 5.18e-28 | 9 |
intestinal epithelium | 5.18e-28 | 9 |
organ component layer | 2.95e-26 | 24 |
simple columnar epithelium | 1.26e-22 | 11 |
digestive system | 5.12e-14 | 116 |
digestive tract | 5.12e-14 | 116 |
primitive gut | 5.12e-14 | 116 |
endoderm-derived structure | 1.08e-13 | 118 |
endoderm | 1.08e-13 | 118 |
presumptive endoderm | 1.08e-13 | 118 |
small intestine | 6.93e-12 | 4 |
subdivision of digestive tract | 8.10e-12 | 114 |
ileal mucosa | 3.10e-09 | 3 |
ileum | 3.10e-09 | 3 |
mucosa of small intestine | 3.10e-09 | 3 |
wall of small intestine | 3.10e-09 | 3 |
colon | 4.79e-07 | 2 |
large intestine | 4.79e-07 | 2 |