FFCP PHASE1:Mm9::chrX:103338538..103338553,+: Difference between revisions
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{{FFCP|EntrezGene=279572|HGNC=|MCL_coexpression_id=193|UniProt=|association_with_transcript=0bp_to_ENSMUST00000139380_5end|description=CAGE_peak_2_at_Tlr13_5end|id=chrX:103338538..103338553,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,9.42e-08,6;CL:0000556,9.42e-08,6;CL:0002092,3.07e-07,3;CL:0002540,3.07e-07,3;CL:0000839,8.93e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.23e-07,3;DOID:4045,1.23e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.70e-13,32;UBERON:0002106,3.26e-12,6;UBERON:0004457,3.26e-12,6;UBERON:0000042,3.26e-12,6;UBERON:0004854,3.26e-12,6;UBERON:0009034,3.26e-12,6;UBERON:0002095,3.26e-12,6;UBERON:0004782,3.26e-12,6;UBERON:0003281,3.26e-12,6;UBERON:0009664,3.26e-12,6;UBERON:0002296,3.26e-12,6;UBERON:0005602,3.26e-12,6;UBERON:0001179,3.26e-12,6;UBERON:0006293,3.26e-12,6;UBERON:0002371,3.49e-11,16;UBERON:0001474,3.80e-11,22;UBERON:0004765,3.80e-11,22;UBERON:0001434,3.80e-11,22;UBERON:0003887,2.45e-09,10;UBERON:0002193,1.30e-08,48;UBERON:0002405,1.30e-08,48;UBERON:0002390,4.02e-08,45;UBERON:0003061,4.02e-08,45|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.01237633694913,0,1.41957974411207,1.64537320326887,1.27316895539409,0.340173160604279,0.0992909512008853,0,0.47997726838022,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,8.37063261473815,7.0320181007142,4.71171369576418,12.3528612486513,11.6117732442936,11.6522484727477,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,2.6996991518442,2.96659908770092,2.1314403448383,0.299600110518405,0.768436610643109,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0.510749352340751,0.307213066512487,0.131886287730194,0,0,0.837548997004143,1.12552522006336,0.30559649555362,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.25026074212081,1.03909497345377,0,0.913396434936424,0,0.60289056221049,0.117588707135705,0.251333182659351,0,1.15679485535929,3.5384422077995,0.485300549842228,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,1.53274233125155,0,0,0.127070227073065,0.149790639404823,0,0.251308704225729,0,0.767146371990992,0.83115217823824,0.162241263067758,0.407357455401265,1.49288364732112,0.252722758433675,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.492502392237286,0.324275238183423,0.584799949701329,0.878200461164203,0.268412837520744,1.26173969138476,0.205809224758569,0.660837565967596,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,1.50801125280162,0.198956472041151,0.38992817423824,0.898819408654221,0.864552199498777,0.796565093017469,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.442830443938806,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.964708639009667,0.25462585178142,0,0.648540907100142,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,0.505157755894224,0,0.482443521363367,2.40179147216586,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,1.26108115284953,0.664394068946325,0.956728611944923,0.983179888294428,1.89953480052485,1.59113964439663,13.5712155545345,11.4220193601929,0.983528546038072,0.275936746304732,0.321101179975584,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.989820737835213,0,0,0.906970670894253,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0.968786560175433,0.663442174209714,0,0.164140899745061,2.04036585640896,0,4.10090113914846,1.23832120777933,2.22233432843654,1.69531611304222,1.77702496037333,2.51655990527175,0,0.279902904647316,0,0.954670618015114,0,0.203319467126849,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.504832249740738,0.304827226619999,0.504130925684203,0.877120926657772,0.673482891482306,0.233753804363138,0,0,0,0,0.386379188064381,1.31377732815827,1.09890974560359,0.643105137237198,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0,0.412085900803307,0.883193520806384,0,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.956441660344217,0.441182838239031,0.463735671240843|short_description=p2@Tlr13}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=279572 | |||
|HGNC= | |||
|MCL_coexpression_id=193 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000139380_5end | |||
|cluster_id=chrX:103338538..103338553,+ | |||
|description=CAGE_peak_2_at_Tlr13_5end | |||
|id=chrX:103338538..103338553,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,9.42e-08,6;CL:0000556,9.42e-08,6;CL:0002092,3.07e-07,3;CL:0002540,3.07e-07,3;CL:0000839,8.93e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.23e-07,3;DOID:4045,1.23e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.70e-13,32;UBERON:0002106,3.26e-12,6;UBERON:0004457,3.26e-12,6;UBERON:0000042,3.26e-12,6;UBERON:0004854,3.26e-12,6;UBERON:0009034,3.26e-12,6;UBERON:0002095,3.26e-12,6;UBERON:0004782,3.26e-12,6;UBERON:0003281,3.26e-12,6;UBERON:0009664,3.26e-12,6;UBERON:0002296,3.26e-12,6;UBERON:0005602,3.26e-12,6;UBERON:0001179,3.26e-12,6;UBERON:0006293,3.26e-12,6;UBERON:0002371,3.49e-11,16;UBERON:0001474,3.80e-11,22;UBERON:0004765,3.80e-11,22;UBERON:0001434,3.80e-11,22;UBERON:0003887,2.45e-09,10;UBERON:0002193,1.30e-08,48;UBERON:0002405,1.30e-08,48;UBERON:0002390,4.02e-08,45;UBERON:0003061,4.02e-08,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66554880907831,1.01237633694913,0,1.41957974411207,1.64537320326887,1.27316895539409,0.340173160604279,0.0992909512008853,0,0.47997726838022,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0,8.37063261473815,7.0320181007142,4.71171369576418,12.3528612486513,11.6117732442936,11.6522484727477,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,1.14613375975503,0,0,0,0,0,0,2.6996991518442,2.96659908770092,2.1314403448383,0.299600110518405,0.768436610643109,0.103689612308478,0.270011876663381,0,0,0,0,0,0,0,0.510749352340751,0.307213066512487,0.131886287730194,0,0,0.837548997004143,1.12552522006336,0.30559649555362,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.22836775943812,7.25026074212081,1.03909497345377,0,0.913396434936424,0,0.60289056221049,0.117588707135705,0.251333182659351,0,1.15679485535929,3.5384422077995,0.485300549842228,0.441683036920787,1.45462575940567,0,0.292780797011547,0.209446706813455,1.53274233125155,0,0,0.127070227073065,0.149790639404823,0,0.251308704225729,0,0.767146371990992,0.83115217823824,0.162241263067758,0.407357455401265,1.49288364732112,0.252722758433675,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0.268273401399619,0,0,0.492502392237286,0.324275238183423,0.584799949701329,0.878200461164203,0.268412837520744,1.26173969138476,0.205809224758569,0.660837565967596,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,1.50801125280162,0.198956472041151,0.38992817423824,0.898819408654221,0.864552199498777,0.796565093017469,0,0,1.1270773567308,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.442830443938806,0,0,0.889357881261447,0.166845105716094,0.196558995113203,0.449724224769707,0.608580364165509,0.964708639009667,0.25462585178142,0,0.648540907100142,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,0.505157755894224,0,0.482443521363367,2.40179147216586,0,0,0.339490171550376,0.234690248288502,0.335012514883631,0.714130922658041,0.585400943573396,1.26108115284953,0.664394068946325,0.956728611944923,0.983179888294428,1.89953480052485,1.59113964439663,13.5712155545345,11.4220193601929,0.983528546038072,0.275936746304732,0.321101179975584,0.468846746368813,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.989820737835213,0,0,0.906970670894253,0,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,1.05418608574999,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0.32977250588296,0.968786560175433,0.663442174209714,0,0.164140899745061,2.04036585640896,0,4.10090113914846,1.23832120777933,2.22233432843654,1.69531611304222,1.77702496037333,2.51655990527175,0,0.279902904647316,0,0.954670618015114,0,0.203319467126849,0.432021363287205,0.627264888043406,0.436725127492355,0.269728692769641,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,0,0.149516546043979,0,0.194451188344048,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0.483168241652012,0,0.316011120628178,0.405450430580328,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.240390899039938,0.295379054349154,0.504832249740738,0.304827226619999,0.504130925684203,0.877120926657772,0.673482891482306,0.233753804363138,0,0,0,0,0.386379188064381,1.31377732815827,1.09890974560359,0.643105137237198,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,0.171853182343688,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.412070114477788,0.320919209591815,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0.476293691283074,0.115884325944855,0,0.412085900803307,0.883193520806384,0,0.354951612318675,0.238436189947321,0.436039249896986,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0.956441660344217,0.441182838239031,0.463735671240843 | |||
|short_description=p2@Tlr13 | |||
}} |
Latest revision as of 12:31, 1 October 2015
Short description: | p2@Tlr13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tlr13_5end |
Coexpression cluster: | MCL_coexpression_mm9:193 |
Association with transcript: | 0bp_to_ENSMUST00000139380_5end |
EntrezGene: | Tlr13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 9.42e-08 | 6 |
megakaryocyte | 9.42e-08 | 6 |
bone marrow cell | 3.07e-07 | 3 |
mesenchymal stem cell of the bone marrow | 3.07e-07 | 3 |
myeloid lineage restricted progenitor cell | 8.93e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.70e-13 | 32 |
spleen | 3.26e-12 | 6 |
cavity lining | 3.26e-12 | 6 |
serous membrane | 3.26e-12 | 6 |
gastrointestinal system mesentery | 3.26e-12 | 6 |
stomach region | 3.26e-12 | 6 |
mesentery | 3.26e-12 | 6 |
gastrointestinal system serosa | 3.26e-12 | 6 |
mesentery of stomach | 3.26e-12 | 6 |
gut mesentery | 3.26e-12 | 6 |
dorsal mesentery | 3.26e-12 | 6 |
dorsal mesogastrium | 3.26e-12 | 6 |
peritoneal cavity | 3.26e-12 | 6 |
spleen primordium | 3.26e-12 | 6 |
bone marrow | 3.49e-11 | 16 |
bone element | 3.80e-11 | 22 |
skeletal element | 3.80e-11 | 22 |
skeletal system | 3.80e-11 | 22 |
intraembryonic coelom | 2.45e-09 | 10 |
hemolymphoid system | 1.30e-08 | 48 |
immune system | 1.30e-08 | 48 |
hematopoietic system | 4.02e-08 | 45 |
blood island | 4.02e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.23e-07 | 3 |
muscle cancer | 1.23e-07 | 3 |