FFCP PHASE1:Mm9::chr9:40273326..40273349,-: Difference between revisions
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{{FFCP|EntrezGene=235283|HGNC=|MCL_coexpression_id=46|UniProt=|association_with_transcript=-177bp_to_ENSMUST00000148170_5end|description=CAGE_peak_10_at_Gramd1b_5end|id=chr9:40273326..40273349,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,5.40e-07,6;CL:0000677,5.40e-07,6;CL:0000584,5.40e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.49e-15!43;UBERON:0002113!1.38e-11!14;UBERON:0003918!1.38e-11!14;UBERON:0005095!1.38e-11!14;UBERON:0007687!1.38e-11!14;UBERON:0000344!2.44e-11!15;UBERON:0005409!4.61e-11!59;UBERON:0006554!1.12e-09!16;UBERON:0001242!1.41e-09!13;UBERON:0000060!1.41e-09!13;UBERON:0001262!1.41e-09!13;UBERON:0004786!1.41e-09!13;UBERON:0001008!6.71e-09!17;UBERON:0004923!5.01e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-29,31;UBERON:0005409,7.71e-20,47;UBERON:0002113,1.10e-10,14;UBERON:0003918,1.10e-10,14;UBERON:0011143,1.10e-10,14;UBERON:0005095,1.10e-10,14;UBERON:0007687,1.10e-10,14;UBERON:0000344,3.72e-09,15;UBERON:0006554,5.46e-08,18;UBERON:0001008,1.71e-07,19;UBERON:0004923,8.82e-07,24|phase1_expression=0,5.93258192986914,3.18499467572675,12.0985684522732,11.0197060588196,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,1.43993180514066,1.14704640533585,2.29692785646008,1.7230479846363,0.861884930743556,4.75058548640935,0.504060259519861,0.443461021310609,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,6.62266502370548,0,0,0.173485326766136,0.304465478312141,0,0,0,0,77.6192198685934,0,0,0,0,0,1.86391761218122,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0.622034853050465,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,4.7601101999438,0,0,0,1.81515172161008,1.33426826306922,1.90225626112559,5.21981967698963,3.12928013975621,2.76468729680296,3.38226002469956,3.8992817423824,9.88701349519644,4.10662294761919,7.96565093017469,0,0.456994050438915,2.25415471346161,4.88763186828754,5.81857461502877,6.45249542990931,11.3193401452421,27.6030976721856,27.4747773722406,25.7900072596563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,6.41257840585672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0|short_description=p10@Gramd1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=235283 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-177bp_to_ENSMUST00000148170_5end | |||
|cluster_id=chr9:40273326..40273349,- | |||
|description=CAGE_peak_10_at_Gramd1b_5end | |||
|id=chr9:40273326..40273349,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.40e-07,6;CL:0000677,5.40e-07,6;CL:0000584,5.40e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.49e-15!43;UBERON:0002113!1.38e-11!14;UBERON:0003918!1.38e-11!14;UBERON:0005095!1.38e-11!14;UBERON:0007687!1.38e-11!14;UBERON:0000344!2.44e-11!15;UBERON:0005409!4.61e-11!59;UBERON:0006554!1.12e-09!16;UBERON:0001242!1.41e-09!13;UBERON:0000060!1.41e-09!13;UBERON:0001262!1.41e-09!13;UBERON:0004786!1.41e-09!13;UBERON:0001008!6.71e-09!17;UBERON:0004923!5.01e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.16e-29,31;UBERON:0005409,7.71e-20,47;UBERON:0002113,1.10e-10,14;UBERON:0003918,1.10e-10,14;UBERON:0011143,1.10e-10,14;UBERON:0005095,1.10e-10,14;UBERON:0007687,1.10e-10,14;UBERON:0000344,3.72e-09,15;UBERON:0006554,5.46e-08,18;UBERON:0001008,1.71e-07,19;UBERON:0004923,8.82e-07,24 | |||
|phase1_expression=0,5.93258192986914,3.18499467572675,12.0985684522732,11.0197060588196,0,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27268398936633,0,0,1.43993180514066,1.14704640533585,2.29692785646008,1.7230479846363,0.861884930743556,4.75058548640935,0.504060259519861,0.443461021310609,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,6.62266502370548,0,0,0.173485326766136,0.304465478312141,0,0,0,0,77.6192198685934,0,0,0,0,0,1.86391761218122,0,0,8.9409969323007,0,0,0,0,0,0,0,0,0,0,0.916554274652847,0.622034853050465,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1817767151575,4.7601101999438,0,0,0,1.81515172161008,1.33426826306922,1.90225626112559,5.21981967698963,3.12928013975621,2.76468729680296,3.38226002469956,3.8992817423824,9.88701349519644,4.10662294761919,7.96565093017469,0,0.456994050438915,2.25415471346161,4.88763186828754,5.81857461502877,6.45249542990931,11.3193401452421,27.6030976721856,27.4747773722406,25.7900072596563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,6.41257840585672,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,3.49960427887841,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.377252682772152,0,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p10@Gramd1b | |||
}} |
Latest revision as of 15:21, 26 September 2015
Short description: | p10@Gramd1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Gramd1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | -177bp_to_ENSMUST00000148170_5end |
EntrezGene: | Gramd1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.40e-07 | 6 |
gut absorptive cell | 5.40e-07 | 6 |
enterocyte | 5.40e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.16e-29 | 31 |
gastrointestinal system | 7.71e-20 | 47 |
kidney | 1.10e-10 | 14 |
kidney mesenchyme | 1.10e-10 | 14 |
upper urinary tract | 1.10e-10 | 14 |
kidney rudiment | 1.10e-10 | 14 |
kidney field | 1.10e-10 | 14 |
mucosa | 3.72e-09 | 15 |
urinary system structure | 5.46e-08 | 18 |
renal system | 1.71e-07 | 19 |
organ component layer | 8.82e-07 | 24 |