FFCP PHASE1:Mm9::chr11:23565410..23565438,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:23565410..23565438,+
|short_description=p6@Pus10
|description=CAGE_peak_6_at_Pus10_5end
|association_with_transcript=-235bp_to_ENSMUST00000109525,NM_00103...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74467 | |EntrezGene=74467 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D3U0 | |UniProt=Q9D3U0 | ||
|association_with_transcript=-235bp_to_ENSMUST00000109525,NM_001033654,NM_028956,uc007ifk.1,uc007ifl.1_5end | |||
|cluster_id=chr11:23565410..23565438,+ | |||
|description=CAGE_peak_6_at_Pus10_5end | |||
|id=chr11:23565410..23565438,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.86e-09,6;CL:0000677,3.86e-09,6;CL:0000584,3.86e-09,6;CL:0000075,1.06e-07,7;CL:0002563,1.16e-07,9;CL:0002251,1.16e-07,9;CL:0000066,6.55e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.41e-11!43;UBERON:0009854!1.29e-10!23;UBERON:0009856!1.29e-10!23;UBERON:0002107!4.46e-10!22;UBERON:0007499!4.46e-10!22;UBERON:0006925!4.46e-10!22;UBERON:0009497!4.46e-10!22;UBERON:0000015!4.46e-10!22;UBERON:0002423!4.46e-10!22;UBERON:0006235!4.46e-10!22;UBERON:0008835!4.46e-10!22;UBERON:0003894!4.46e-10!22;UBERON:0004161!4.46e-10!22;UBERON:0008836!4.46e-10!22;UBERON:0004119!8.92e-10!130;UBERON:0000925!8.92e-10!130;UBERON:0006595!8.92e-10!130;UBERON:0000344!9.74e-10!15;UBERON:0001007!4.90e-09!128;UBERON:0001555!4.90e-09!128;UBERON:0007026!4.90e-09!128;UBERON:0002365!5.80e-09!25;UBERON:0002330!5.80e-09!25;UBERON:0001242!1.10e-08!13;UBERON:0000060!1.10e-08!13;UBERON:0001262!1.10e-08!13;UBERON:0004786!1.10e-08!13;UBERON:0004921!2.71e-08!126;UBERON:0004185!2.71e-08!126;UBERON:0005409!3.14e-08!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.53e-27,31;UBERON:0005409,6.71e-17,47;UBERON:0004119,1.83e-15,118;UBERON:0000925,1.83e-15,118;UBERON:0006595,1.83e-15,118;UBERON:0001007,6.79e-15,116;UBERON:0001555,6.79e-15,116;UBERON:0007026,6.79e-15,116;UBERON:0000344,1.77e-14,15;UBERON:0004921,1.87e-13,114;UBERON:0009854,2.26e-13,23;UBERON:0009856,2.26e-13,23;UBERON:0002107,2.27e-12,22;UBERON:0007499,2.27e-12,22;UBERON:0006925,2.27e-12,22;UBERON:0009497,2.27e-12,22;UBERON:0000015,2.27e-12,22;UBERON:0002423,2.27e-12,22;UBERON:0006235,2.27e-12,22;UBERON:0008835,2.27e-12,22;UBERON:0003894,2.27e-12,22;UBERON:0004161,2.27e-12,22;UBERON:0008836,2.27e-12,22;UBERON:0001242,2.32e-12,13;UBERON:0001262,2.32e-12,13;UBERON:0004786,2.32e-12,13;UBERON:0002365,7.03e-12,25;UBERON:0002330,7.03e-12,25;UBERON:0004923,1.36e-10,24;UBERON:0003929,5.53e-08,55;UBERON:0003350,1.16e-07,9;UBERON:0004808,1.16e-07,9;UBERON:0001277,1.16e-07,9 | |||
|phase1_expression=0.160148847104794,3.83872948403297,3.63999391511629,7.56160528267075,13.5241847085514,1.00727563147134,1.16806320297763,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,2.06468352960453,0.57423196411502,5.1691439539089,2.58565479223067,3.04037471130198,4.53654233567875,1.33038306393183,0,0,0,2.02196133825892,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,0,3.44169550792555,0,9.17495425784289,7.14754059192436,11.6486990645307,1.26399978118577,0.170430322578058,0,0,0,0,0,0,0,0,0,3.08296475241462,0,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.502666365318702,1.23597483867187,5.49477556295664,0,0,0,0,1.86391761218122,0.292780797011547,0,2.55457055208591,0.11981512450592,0.599902730993408,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0,0.248813941220186,0,5.26104639716185,0,0,0,0,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,3.30418782983798,4.49565963328025,0,0.464473343720877,0.38660238396628,2.21851877085677,3.11329261382818,1.33157938278791,4.2707615539006,3.45867804920423,2.5133520880027,1.59165177632921,3.11942539390592,1.79763881730844,4.97117514711797,2.78797782556114,0,0,0,0.407302655690628,0,0.280543279561274,0.252946148497029,0.590440591918409,1.56998727841375,1.35736880313981,5.63259991465583,0.500535317148282,0.393117990226406,0.224862112384854,0.811440485554012,0.241177159752417,0.763877555344259,3.74004978686054,1.78348749452539,2.47105271869273,2.87536413054709,4.83783231969054,4.99260276983297,5.80931419278357,5.9201146462231,6.27176577772377,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.159454768657487,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,1.37968373152366,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,1.80899805217755,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0.938686832254841,2.75381692122966,0,0.98931751764888,0,0.72375509913787,0.238744688006273,0.492422699235184,2.62332752966866,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.324016022465404,0,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,2.98114438571124,0,1.69107881605257,0,0,0,0.129159823477731,0,0.234714477291508,0,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0.443971906748129,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.628839487883947,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.749132059759059,0.768301828858431,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0,0.735994600671987,0.342869252385415,0.70990322463735,0.476872379894642,0.872078499793971,1.03520318456864,0.761531471025089,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.830445126869219,0.985044823755635,0.818462086339379,0.464810523557898,1.15743966588685,0,0,1.07435527024149,1.3390183244819,0.220591419119515,0.231867835620421 | |phase1_expression=0.160148847104794,3.83872948403297,3.63999391511629,7.56160528267075,13.5241847085514,1.00727563147134,1.16806320297763,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.75991665072747,2.06468352960453,0.57423196411502,5.1691439539089,2.58565479223067,3.04037471130198,4.53654233567875,1.33038306393183,0,0,0,2.02196133825892,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,0,3.44169550792555,0,9.17495425784289,7.14754059192436,11.6486990645307,1.26399978118577,0.170430322578058,0,0,0,0,0,0,0,0,0,3.08296475241462,0,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.502666365318702,1.23597483867187,5.49477556295664,0,0,0,0,1.86391761218122,0.292780797011547,0,2.55457055208591,0.11981512450592,0.599902730993408,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0,0.248813941220186,0,5.26104639716185,0,0,0,0,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0.219550115291051,0.134206418760372,0,0,3.30418782983798,4.49565963328025,0,0.464473343720877,0.38660238396628,2.21851877085677,3.11329261382818,1.33157938278791,4.2707615539006,3.45867804920423,2.5133520880027,1.59165177632921,3.11942539390592,1.79763881730844,4.97117514711797,2.78797782556114,0,0,0,0.407302655690628,0,0.280543279561274,0.252946148497029,0.590440591918409,1.56998727841375,1.35736880313981,5.63259991465583,0.500535317148282,0.393117990226406,0.224862112384854,0.811440485554012,0.241177159752417,0.763877555344259,3.74004978686054,1.78348749452539,2.47105271869273,2.87536413054709,4.83783231969054,4.99260276983297,5.80931419278357,5.9201146462231,6.27176577772377,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0,0.44292937929755,0.159454768657487,0.655453258862952,0.518054945597687,0.433947175744535,0,0,0,1.37968373152366,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0,0.307435147943927,1.80899805217755,0,0,0,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0,0.938686832254841,2.75381692122966,0,0.98931751764888,0,0.72375509913787,0.238744688006273,0.492422699235184,2.62332752966866,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0.158167996790568,0,0.324016022465404,0,0.436725127492355,0.404593039154462,0.41326727862668,0.26175594198403,2.98114438571124,0,1.69107881605257,0,0,0,0.129159823477731,0,0.234714477291508,0,0.314578033277133,0.241584120826006,0.288030006257865,0.316011120628178,0,0,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0.443971906748129,0,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.628839487883947,0.367687016900028,0.666740183404846,0.206035057238894,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.749132059759059,0.768301828858431,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0,0.735994600671987,0.342869252385415,0.70990322463735,0.476872379894642,0.872078499793971,1.03520318456864,0.761531471025089,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.830445126869219,0.985044823755635,0.818462086339379,0.464810523557898,1.15743966588685,0,0,1.07435527024149,1.3390183244819,0.220591419119515,0.231867835620421 | ||
|short_description=p6@Pus10 | |||
}} | }} |
Latest revision as of 05:41, 27 September 2015
Short description: | p6@Pus10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Pus10_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | -235bp_to_ENSMUST00000109525, NM_001033654, NM_028956, uc007ifk.1, uc007ifl.1_5end |
EntrezGene: | Pus10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.86e-09 | 6 |
gut absorptive cell | 3.86e-09 | 6 |
enterocyte | 3.86e-09 | 6 |
columnar/cuboidal epithelial cell | 1.06e-07 | 7 |
intestinal epithelial cell | 1.16e-07 | 9 |
epithelial cell of alimentary canal | 1.16e-07 | 9 |
epithelial cell | 6.55e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.53e-27 | 31 |
gastrointestinal system | 6.71e-17 | 47 |
endoderm-derived structure | 1.83e-15 | 118 |
endoderm | 1.83e-15 | 118 |
presumptive endoderm | 1.83e-15 | 118 |
digestive system | 6.79e-15 | 116 |
digestive tract | 6.79e-15 | 116 |
primitive gut | 6.79e-15 | 116 |
mucosa | 1.77e-14 | 15 |
subdivision of digestive tract | 1.87e-13 | 114 |
digestive tract diverticulum | 2.26e-13 | 23 |
sac | 2.26e-13 | 23 |
liver | 2.27e-12 | 22 |
epithelial sac | 2.27e-12 | 22 |
digestive gland | 2.27e-12 | 22 |
epithelium of foregut-midgut junction | 2.27e-12 | 22 |
anatomical boundary | 2.27e-12 | 22 |
hepatobiliary system | 2.27e-12 | 22 |
foregut-midgut junction | 2.27e-12 | 22 |
hepatic diverticulum | 2.27e-12 | 22 |
liver primordium | 2.27e-12 | 22 |
septum transversum | 2.27e-12 | 22 |
liver bud | 2.27e-12 | 22 |
intestinal mucosa | 2.32e-12 | 13 |
wall of intestine | 2.32e-12 | 13 |
gastrointestinal system mucosa | 2.32e-12 | 13 |
exocrine gland | 7.03e-12 | 25 |
exocrine system | 7.03e-12 | 25 |
organ component layer | 1.36e-10 | 24 |
gut epithelium | 5.53e-08 | 55 |
epithelium of mucosa | 1.16e-07 | 9 |
gastrointestinal system epithelium | 1.16e-07 | 9 |
intestinal epithelium | 1.16e-07 | 9 |