FFCP PHASE1:Mm9::chr7:25688030..25688099,+: Difference between revisions
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{{FFCP|EntrezGene=16801|HGNC=|MCL_coexpression_id=36|UniProt=Q61210|association_with_transcript=0bp_to_ENSMUST00000047873,ENSMUST00000098683,ENSMUST00000108423,ENSMUST00000108424,ENSMUST00000127761,ENSMUST00000129383_5end|description=CAGE_peak_1_at_Arhgef1_5end|id=chr7:25688030..25688099,+|ontology_enrichment_celltype=CL:0000988!9.23e-10!32;CL:0002032!9.23e-10!32;CL:0000037!9.23e-10!32;CL:0000566!9.23e-10!32;CL:0000837!9.23e-10!32;CL:0002031!1.14e-08!25;CL:0000738!3.66e-08!17;CL:0002087!3.66e-08!17;CL:0000838!1.03e-07!12;CL:0002320!4.11e-07!46;CL:0000134!4.11e-07!46;CL:0000084!4.28e-07!11;CL:0000827!4.28e-07!11;CL:0000542!6.54e-07!13;CL:0000051!6.54e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,9.23e-10,32;CL:0002032,9.23e-10,32;CL:0000037,9.23e-10,32;CL:0000837,9.23e-10,32;CL:0002031,1.14e-08,25;CL:0000738,3.66e-08,17;CL:0002087,3.66e-08,17;CL:0000838,1.03e-07,12;CL:0002320,4.11e-07,46;CL:0000134,4.11e-07,46;CL:0000084,4.28e-07,11;CL:0000827,4.28e-07,11;CL:0000542,6.54e-07,13;CL:0000051,6.54e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.74e-19!48;UBERON:0003081!5.56e-19!88;UBERON:0002390!2.74e-18!45;UBERON:0003061!2.74e-18!45;UBERON:0004177!4.78e-12!29;UBERON:0002405!9.40e-12!70;UBERON:0000926!2.36e-11!193;UBERON:0004120!2.36e-11!193;UBERON:0006603!2.36e-11!193;UBERON:0001004!2.57e-11!42;UBERON:0000065!2.68e-11!41;UBERON:0002370!1.38e-09!23;UBERON:0000974!1.38e-09!23;UBERON:0004807!1.38e-09!23;UBERON:0005058!1.38e-09!23;UBERON:0003351!1.38e-09!23;UBERON:0009113!1.38e-09!23;UBERON:0003295!1.38e-09!23;UBERON:0009722!1.38e-09!23;UBERON:0005562!1.38e-09!23;UBERON:0007690!1.38e-09!23;UBERON:0003408!1.56e-09!24;UBERON:0006562!3.59e-09!24;UBERON:0001557!3.59e-09!24;UBERON:0001042!3.59e-09!24;UBERON:0008814!3.59e-09!24;UBERON:0009145!3.59e-09!24;UBERON:0000072!4.52e-08!27;UBERON:0002204!5.29e-08!32;UBERON:0001474!4.07e-07!22;UBERON:0004765!4.07e-07!22;UBERON:0001434!4.07e-07!22;UBERON:0002384!4.11e-07!46;UBERON:0002371!4.60e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.74e-19,48;UBERON:0002405,3.74e-19,48;UBERON:0003081,2.04e-18,87;UBERON:0002390,2.74e-18,45;UBERON:0003061,2.74e-18,45;UBERON:0000926,2.28e-13,120;UBERON:0004120,2.28e-13,120;UBERON:0006603,2.28e-13,120;UBERON:0004177,4.78e-12,29;UBERON:0005057,4.78e-12,29;UBERON:0000077,2.00e-11,35;UBERON:0001004,2.57e-11,42;UBERON:0000065,2.68e-11,41;UBERON:0002370,1.38e-09,23;UBERON:0000974,1.38e-09,23;UBERON:0004807,1.38e-09,23;UBERON:0005058,1.38e-09,23;UBERON:0003351,1.38e-09,23;UBERON:0009113,1.38e-09,23;UBERON:0003295,1.38e-09,23;UBERON:0009722,1.38e-09,23;UBERON:0005562,1.38e-09,23;UBERON:0007690,1.38e-09,23;UBERON:0003408,1.56e-09,24;UBERON:0006562,3.59e-09,24;UBERON:0001557,3.59e-09,24;UBERON:0001042,3.59e-09,24;UBERON:0008814,3.59e-09,24;UBERON:0009145,3.59e-09,24;UBERON:0000072,4.52e-08,27;UBERON:0002204,5.29e-08,32;UBERON:0001474,4.07e-07,22;UBERON:0004765,4.07e-07,22;UBERON:0001434,4.07e-07,22;UBERON:0002384,4.11e-07,46;UBERON:0002371,4.60e-07,16;UBERON:0001041,5.57e-07,80|phase1_expression=16.9757777931082,21.287499866001,24.5699589270349,26.0119221723874,18.0322462780685,19.809754085603,22.4268134971705,437.211573173177,115.869118330822,148.865038740788,41.9484022152487,34.38180052699,407.286536506338,521.46270042932,49.9664642723494,54.668322195253,25.1842276126133,211.517381872698,194.839610153755,186.731446791133,30.8707143248383,68.0143015726064,47.5383616232862,33.9183936322022,30.7408436630008,14.3557991028755,14.2151458732495,15.9448712187558,12.5415456841207,16.8860186939154,11.9734475753865,18.4158895303293,25.2176562909674,0,9.82095507154334,7.81302833184914,11.2293145944303,295.901862930994,170.331105106188,161.768836887904,241.174910092716,241.115056190331,232.073948748891,19.2622131502633,23.1139403180493,23.1268907723719,56.3321767930588,21.1484401689033,19.552070263368,20.4151394027998,31.7769177089573,18.6878333674463,198.822388178418,424.336853076636,355.587239492727,32.1574295044934,33.8109459127733,34.5500301825886,4.24864567805155,7.40587370980846,8.23980824558033,31.1736969503602,31.1253178638899,90.4399215867806,90.9757053561617,88.0995342533164,44.6404164672423,29.9690278150813,15.4497522339632,14.5806413398226,14.302097371894,8.85518051651791,8.83474163806454,10.656699531701,12.8432931164437,11.9498442259303,3.30347642998166,4.97980618532232,5.83704826373725,6.98997324970027,6.67859798297591,5.2091337055676,4.18774498502071,9.56696437053856,6.87592114995646,8.83885756421003,11.9592211871246,7.82877672466262,18.5529173666301,25.9210451166274,71.3066642206127,37.858650587181,2.719885334831,7.55584468292944,11.0461990966104,11.2006721774334,29.6337726477996,15.8500199997594,12.4697282209377,11.6602059588412,18.3096445709685,14.115912515575,22.9324715735981,49.7746692207332,23.1645413881999,20.0154293725328,27.2983200307983,31.0580152835843,128.951066056292,25.0867215019554,23.7674897669606,15.2232739156071,19.602317266765,17.0316583824463,27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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16801 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q61210 | |||
|association_with_transcript=0bp_to_ENSMUST00000047873,ENSMUST00000098683,ENSMUST00000108423,ENSMUST00000108424,ENSMUST00000127761,ENSMUST00000129383_5end | |||
|cluster_id=chr7:25688030..25688099,+ | |||
|description=CAGE_peak_1_at_Arhgef1_5end | |||
|id=chr7:25688030..25688099,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.23e-10!32;CL:0002032!9.23e-10!32;CL:0000037!9.23e-10!32;CL:0000566!9.23e-10!32;CL:0000837!9.23e-10!32;CL:0002031!1.14e-08!25;CL:0000738!3.66e-08!17;CL:0002087!3.66e-08!17;CL:0000838!1.03e-07!12;CL:0002320!4.11e-07!46;CL:0000134!4.11e-07!46;CL:0000084!4.28e-07!11;CL:0000827!4.28e-07!11;CL:0000542!6.54e-07!13;CL:0000051!6.54e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.23e-10,32;CL:0002032,9.23e-10,32;CL:0000037,9.23e-10,32;CL:0000837,9.23e-10,32;CL:0002031,1.14e-08,25;CL:0000738,3.66e-08,17;CL:0002087,3.66e-08,17;CL:0000838,1.03e-07,12;CL:0002320,4.11e-07,46;CL:0000134,4.11e-07,46;CL:0000084,4.28e-07,11;CL:0000827,4.28e-07,11;CL:0000542,6.54e-07,13;CL:0000051,6.54e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.74e-19!48;UBERON:0003081!5.56e-19!88;UBERON:0002390!2.74e-18!45;UBERON:0003061!2.74e-18!45;UBERON:0004177!4.78e-12!29;UBERON:0002405!9.40e-12!70;UBERON:0000926!2.36e-11!193;UBERON:0004120!2.36e-11!193;UBERON:0006603!2.36e-11!193;UBERON:0001004!2.57e-11!42;UBERON:0000065!2.68e-11!41;UBERON:0002370!1.38e-09!23;UBERON:0000974!1.38e-09!23;UBERON:0004807!1.38e-09!23;UBERON:0005058!1.38e-09!23;UBERON:0003351!1.38e-09!23;UBERON:0009113!1.38e-09!23;UBERON:0003295!1.38e-09!23;UBERON:0009722!1.38e-09!23;UBERON:0005562!1.38e-09!23;UBERON:0007690!1.38e-09!23;UBERON:0003408!1.56e-09!24;UBERON:0006562!3.59e-09!24;UBERON:0001557!3.59e-09!24;UBERON:0001042!3.59e-09!24;UBERON:0008814!3.59e-09!24;UBERON:0009145!3.59e-09!24;UBERON:0000072!4.52e-08!27;UBERON:0002204!5.29e-08!32;UBERON:0001474!4.07e-07!22;UBERON:0004765!4.07e-07!22;UBERON:0001434!4.07e-07!22;UBERON:0002384!4.11e-07!46;UBERON:0002371!4.60e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.74e-19,48;UBERON:0002405,3.74e-19,48;UBERON:0003081,2.04e-18,87;UBERON:0002390,2.74e-18,45;UBERON:0003061,2.74e-18,45;UBERON:0000926,2.28e-13,120;UBERON:0004120,2.28e-13,120;UBERON:0006603,2.28e-13,120;UBERON:0004177,4.78e-12,29;UBERON:0005057,4.78e-12,29;UBERON:0000077,2.00e-11,35;UBERON:0001004,2.57e-11,42;UBERON:0000065,2.68e-11,41;UBERON:0002370,1.38e-09,23;UBERON:0000974,1.38e-09,23;UBERON:0004807,1.38e-09,23;UBERON:0005058,1.38e-09,23;UBERON:0003351,1.38e-09,23;UBERON:0009113,1.38e-09,23;UBERON:0003295,1.38e-09,23;UBERON:0009722,1.38e-09,23;UBERON:0005562,1.38e-09,23;UBERON:0007690,1.38e-09,23;UBERON:0003408,1.56e-09,24;UBERON:0006562,3.59e-09,24;UBERON:0001557,3.59e-09,24;UBERON:0001042,3.59e-09,24;UBERON:0008814,3.59e-09,24;UBERON:0009145,3.59e-09,24;UBERON:0000072,4.52e-08,27;UBERON:0002204,5.29e-08,32;UBERON:0001474,4.07e-07,22;UBERON:0004765,4.07e-07,22;UBERON:0001434,4.07e-07,22;UBERON:0002384,4.11e-07,46;UBERON:0002371,4.60e-07,16;UBERON:0001041,5.57e-07,80 | |||
|phase1_expression=16.9757777931082,21.287499866001,24.5699589270349,26.0119221723874,18.0322462780685,19.809754085603,22.4268134971705,437.211573173177,115.869118330822,148.865038740788,41.9484022152487,34.38180052699,407.286536506338,521.46270042932,49.9664642723494,54.668322195253,25.1842276126133,211.517381872698,194.839610153755,186.731446791133,30.8707143248383,68.0143015726064,47.5383616232862,33.9183936322022,30.7408436630008,14.3557991028755,14.2151458732495,15.9448712187558,12.5415456841207,16.8860186939154,11.9734475753865,18.4158895303293,25.2176562909674,0,9.82095507154334,7.81302833184914,11.2293145944303,295.901862930994,170.331105106188,161.768836887904,241.174910092716,241.115056190331,232.073948748891,19.2622131502633,23.1139403180493,23.1268907723719,56.3321767930588,21.1484401689033,19.552070263368,20.4151394027998,31.7769177089573,18.6878333674463,198.822388178418,424.336853076636,355.587239492727,32.1574295044934,33.8109459127733,34.5500301825886,4.24864567805155,7.40587370980846,8.23980824558033,31.1736969503602,31.1253178638899,90.4399215867806,90.9757053561617,88.0995342533164,44.6404164672423,29.9690278150813,15.4497522339632,14.5806413398226,14.302097371894,8.85518051651791,8.83474163806454,10.656699531701,12.8432931164437,11.9498442259303,3.30347642998166,4.97980618532232,5.83704826373725,6.98997324970027,6.67859798297591,5.2091337055676,4.18774498502071,9.56696437053856,6.87592114995646,8.83885756421003,11.9592211871246,7.82877672466262,18.5529173666301,25.9210451166274,71.3066642206127,37.858650587181,2.719885334831,7.55584468292944,11.0461990966104,11.2006721774334,29.6337726477996,15.8500199997594,12.4697282209377,11.6602059588412,18.3096445709685,14.115912515575,22.9324715735981,49.7746692207332,23.1645413881999,20.0154293725328,27.2983200307983,31.0580152835843,128.951066056292,25.0867215019554,23.7674897669606,15.2232739156071,19.602317266765,17.0316583824463,27.3981687626192,23.7509857613087,43.5063143212498,40.0540218668155,88.4610551949874,39.4711113871678,53.0019644304944,46.0631490478461,11.1835056730873,9.07620470735796,12.3573557019938,25.034791410442,46.4882683082971,37.7938720525847,33.9277506285083,9.73639156131348,7.32000964509802,12.5654352112864,10.4294592115366,9.71718737855256,10.389402227978,7.94982189032012,30.8573272466458,50.0116021852574,11.8779696463827,11.3638602178696,12.2313216384941,9.42598628177239,12.9644733459851,14.1662528765572,21.5675702309709,17.935920839879,16.9600121453109,18.8853460639481,21.1256633074185,20.6125627382923,27.448375369576,30.0298153425778,26.4144886764318,30.6461906539507,32.1020132796392,21.8937693500343,34.4084461783485,34.9993153676013,42.3403614099433,27.1334762021507,23.2180799381285,20.7071370680167,29.3563472125661,24.7922932001729,22.6772655944446,22.0907247512887,27.3638869427612,29.4248662765267,25.1776570367625,31.027650710949,30.5629411987876,30.8481973467451,31.1761163713292,32.7463661775307,12.4071069652835,15.4356918568927,20.4859645449955,11.3713743665324,20.6889603019177,25.3137972327878,20.747661272857,24.6053900040478,19.7916459021935,14.8375988367796,26.0990983849481,12.5171205590248,20.8608223304224,26.0632978373908,23.2007263671753,27.8634016682809,18.1555961894743,24.0960940637784,18.3977863924489,17.4800224292885,18.0332377076929,18.7359221617689,23.4682509472827,29.5973159937144,29.4049897627796,21.6986917530015,19.3108435244891,20.6073263749407,16.8977997439675,17.685581205906,16.9040735797355,16.6397963164792,19.6774317746848,23.3941844959844,24.4440817710163,31.93427125704,35.6697498905078,21.4157902286704,25.8782771749238,33.8648262378338,29.0195035996541,20.4588891137161,15.0693827358406,27.9817242390753,85.3559738569714,13.0749074121634,23.3039916312097,25.292017780503,34.9688469949868,48.4093084006848,48.7989463816328,83.1269339874223,62.738787354264,65.7750128256861,80.524658172031,74.3939448809451,78.9170367127143,76.5193519896196,81.427293327207,92.4639662491806,29.0140921081231,31.1808523324348,10.9174401191699,10.0802050469295,15.2459499200308,27.5193310652767,29.3422644057119,23.4263246577983,33.3906266485838,35.1284132990251,33.6425997864415,39.3476377796477,35.2185310457158,30.9791209385991,30.8324466798288,9.96096080907602,27.5363765304041,27.7782341720918,26.8763482933401,40.2527100052987,21.2392221343941,19.9080121647085,16.3254720760966,19.8035333743693,23.9194533233426,28.2840336108413,31.528251766523,33.808636841408,31.3717692978555,32.2357493094532,21.0837217149998,19.5957532171555,20.7668159509811,17.4659261210371,28.2001930646405,23.148399783412,26.0690143454142,26.9336914579127,26.1632942757372,26.4884505729701,31.6806805886009,34.104963409075,12.7906470871878,44.1895157883166,41.1734288074559,33.3530474852702,33.3048839768751,34.962011645698,29.1480836629851,10.9400928186201,83.2141189485543,51.5967169908056,45.3726592055794,45.0200612241212,68.4838080882336,72.9802372528807,53.0332701580829,55.7006780248159,58.8731888406845,20.0480829783174,24.1997035089569,25.61825285798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| |||
|short_description=p1@Arhgef1 | |||
}} |
Latest revision as of 09:57, 26 September 2015
Short description: | p1@Arhgef1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgef1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000047873, ENSMUST00000098683, ENSMUST00000108423, ENSMUST00000108424, ENSMUST00000127761, ENSMUST00000129383_5end |
EntrezGene: | Arhgef1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.23e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.23e-10 | 32 |
hematopoietic stem cell | 9.23e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.23e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 1.14e-08 | 25 |
leukocyte | 3.66e-08 | 17 |
nongranular leukocyte | 3.66e-08 | 17 |
lymphoid lineage restricted progenitor cell | 1.03e-07 | 12 |
connective tissue cell | 4.11e-07 | 46 |
mesenchymal cell | 4.11e-07 | 46 |
T cell | 4.28e-07 | 11 |
pro-T cell | 4.28e-07 | 11 |
lymphocyte | 6.54e-07 | 13 |
common lymphoid progenitor | 6.54e-07 | 13 |