FFCP PHASE1:Mm9::chr7:109713939..109713988,-: Difference between revisions
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{{FFCP|EntrezGene=20821|HGNC=|MCL_coexpression_id=542|UniProt=Q3U7K7|association_with_transcript=0bp_to_ENSMUST00000033264,ENSMUST00000106913,NM_001082552,NM_009277,uc009irw.1,uc009irx.1_5end|description=CAGE_peak_1_at_Trim21_5end|id=chr7:109713939..109713988,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003104!1.65e-14!131;UBERON:0009142!1.65e-14!131;UBERON:0002405!6.49e-14!70;UBERON:0004119!7.18e-14!130;UBERON:0000925!7.18e-14!130;UBERON:0006595!7.18e-14!130;UBERON:0000926!7.72e-14!193;UBERON:0004120!7.72e-14!193;UBERON:0006603!7.72e-14!193;UBERON:0004921!1.20e-13!126;UBERON:0004185!1.20e-13!126;UBERON:0001007!1.34e-13!128;UBERON:0001555!1.34e-13!128;UBERON:0007026!1.34e-13!128;UBERON:0005057!9.11e-12!51;UBERON:0000490!2.38e-11!66;UBERON:0005911!5.83e-11!69;UBERON:0000077!6.03e-11!97;UBERON:0002530!1.37e-10!65;UBERON:0002193!2.02e-10!48;UBERON:0002390!4.07e-10!45;UBERON:0003061!4.07e-10!45;UBERON:0001041!5.12e-10!92;UBERON:0003929!1.89e-09!55;UBERON:0002368!2.32e-09!60;UBERON:0004177!8.92e-09!29;UBERON:0000949!8.91e-08!72;UBERON:0005256!1.33e-07!47;UBERON:0009569!6.70e-07!66;UBERON:0003408!8.06e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.29e-15,118;UBERON:0000925,3.29e-15,118;UBERON:0006595,3.29e-15,118;UBERON:0004921,5.05e-15,114;UBERON:0001007,6.05e-15,116;UBERON:0001555,6.05e-15,116;UBERON:0007026,6.05e-15,116;UBERON:0001041,1.43e-11,80;UBERON:0000490,2.15e-11,66;UBERON:0005911,5.28e-11,69;UBERON:0002530,1.24e-10,65;UBERON:0002193,1.81e-10,48;UBERON:0002405,1.81e-10,48;UBERON:0002390,3.65e-10,45;UBERON:0003061,3.65e-10,45;UBERON:0000077,4.06e-10,35;UBERON:0003929,1.72e-09,55;UBERON:0002368,2.11e-09,60;UBERON:0004177,7.89e-09,29;UBERON:0005057,7.89e-09,29;UBERON:0000926,1.20e-08,120;UBERON:0004120,1.20e-08,120;UBERON:0006603,1.20e-08,120;UBERON:0002100,2.71e-08,90;UBERON:0005256,6.30e-08,45;UBERON:0000949,8.23e-08,72;UBERON:0003104,4.94e-07,61;UBERON:0009142,4.94e-07,61;UBERON:0009569,6.66e-07,66;UBERON:0003408,7.19e-07,24;UBERON:0001004,9.62e-07,42|phase1_expression=3.52327463630547,5.58360652222978,1.81999695755814,5.74682001482977,5.00895729946347,4.36486106970913,3.27057696833736,37.187517151174,3.51971805379167,4.44722600011788,2.73948749160808,5.66382328866889,35.0961496358972,37.9404546498449,9.66018309265422,10.7311891716608,5.59649502502517,23.8173934845469,27.4228867211478,16.5511964201232,7.05859308253879,8.53902180327614,7.57479388502913,5.59973479776923,3.67054849707472,4.01962374880514,3.01533397311352,3.01659725760245,8.36103045608045,9.07308467135751,4.8780712344167,5.71527606113668,0.61506478758457,0,8.37669697278696,9.14290549471708,9.39179038806898,17.996860121687,15.626706890476,21.9879972468995,15.2940186888064,15.7100461540443,16.9928623560904,13.5968563413623,12.9762471960979,2.9367480345869,7.04152209913235,0.872100625521786,3.73466510648602,1.74986909166855,2.79972843250725,0,8.55691290894455,13.0565185562042,14.7881271622684,5.65970759279083,4.58453503902011,10.8291139378263,0.202316460859598,0,0.633831403506179,3.38844532069132,7.11435836888911,6.74924787961049,4.94433181283487,5.6838409195688,2.09720077362883,2.30530983192933,0.829516898467821,0.405017814995072,0.630974884054146,0.571301968807607,0.883474163806454,0.61245399607477,0.191690942036473,0,3.30347642998166,2.42605942361857,2.76491759861238,0.131886287730194,0.182975287204819,0.52091337055676,1.3959149950069,2.25105044012672,2.59757021220577,2.06240009831567,1.99320353118744,0.931997229126503,3.71058347332602,6.04572480854284,20.5803786978191,6.88339101585109,4.0798280022465,5.39703191637817,7.14754059192436,8.06448396775204,7.5839986871146,2.38602451609281,2.85764605063156,1.7666978725517,4.64783285263046,2.56652954828636,0,7.11066703153331,2.59789249213457,3.04031838570118,3.0331466700887,8.22123933977232,27.188477782953,11.2816025689267,2.4287945747259,6.39377504455497,7.14908041493781,11.1534754008941,9.7598626922635,8.04266184509923,4.94389935468748,9.54355755671417,14.153768831198,2.75003644910596,5.96272099843063,8.24287930329878,3.72783522436244,0.292780797011547,1.8850203613211,9.96282515313506,6.35020159881377,2.39961092397363,4.44745794755726,1.3481157546434,1.37250180845588,0.628271760564322,1.73824320192276,1.02286182932132,2.90903262383384,1.78465389374533,4.9901288286655,7.46441823660558,6.06534620240819,5.89237196482127,2.21204753036596,1.60931473103431,2.52086981727489,2.56198190320716,2.31324097114515,2.8185018462667,2.06143794031403,3.62184719034622,2.15567992932842,2.64748512234947,1.75951124163949,1.31517439456545,2.22437799380478,1.39300866608867,1.4404749548556,3.98068533636986,4.21327912387941,1.02939162845886,7.672414483681,1.86413195281952,1.40715635988658,2.88099298337624,0.946978942340841,2.95146347621106,3.5481435964097,3.0229412817553,3.21928081679543,2.56883753207773,3.62031669809657,6.07419617092652,6.48550476366846,6.14039947186396,7.90380415047782,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20821 | |||
|HGNC= | |||
|MCL_coexpression_id=542 | |||
|TSSclassifier=NA | |||
|UniProt=Q3U7K7 | |||
|association_with_transcript=0bp_to_ENSMUST00000033264,ENSMUST00000106913,NM_001082552,NM_009277,uc009irw.1,uc009irx.1_5end | |||
|cluster_id=chr7:109713939..109713988,- | |||
|description=CAGE_peak_1_at_Trim21_5end | |||
|id=chr7:109713939..109713988,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.65e-14!131;UBERON:0009142!1.65e-14!131;UBERON:0002405!6.49e-14!70;UBERON:0004119!7.18e-14!130;UBERON:0000925!7.18e-14!130;UBERON:0006595!7.18e-14!130;UBERON:0000926!7.72e-14!193;UBERON:0004120!7.72e-14!193;UBERON:0006603!7.72e-14!193;UBERON:0004921!1.20e-13!126;UBERON:0004185!1.20e-13!126;UBERON:0001007!1.34e-13!128;UBERON:0001555!1.34e-13!128;UBERON:0007026!1.34e-13!128;UBERON:0005057!9.11e-12!51;UBERON:0000490!2.38e-11!66;UBERON:0005911!5.83e-11!69;UBERON:0000077!6.03e-11!97;UBERON:0002530!1.37e-10!65;UBERON:0002193!2.02e-10!48;UBERON:0002390!4.07e-10!45;UBERON:0003061!4.07e-10!45;UBERON:0001041!5.12e-10!92;UBERON:0003929!1.89e-09!55;UBERON:0002368!2.32e-09!60;UBERON:0004177!8.92e-09!29;UBERON:0000949!8.91e-08!72;UBERON:0005256!1.33e-07!47;UBERON:0009569!6.70e-07!66;UBERON:0003408!8.06e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.29e-15,118;UBERON:0000925,3.29e-15,118;UBERON:0006595,3.29e-15,118;UBERON:0004921,5.05e-15,114;UBERON:0001007,6.05e-15,116;UBERON:0001555,6.05e-15,116;UBERON:0007026,6.05e-15,116;UBERON:0001041,1.43e-11,80;UBERON:0000490,2.15e-11,66;UBERON:0005911,5.28e-11,69;UBERON:0002530,1.24e-10,65;UBERON:0002193,1.81e-10,48;UBERON:0002405,1.81e-10,48;UBERON:0002390,3.65e-10,45;UBERON:0003061,3.65e-10,45;UBERON:0000077,4.06e-10,35;UBERON:0003929,1.72e-09,55;UBERON:0002368,2.11e-09,60;UBERON:0004177,7.89e-09,29;UBERON:0005057,7.89e-09,29;UBERON:0000926,1.20e-08,120;UBERON:0004120,1.20e-08,120;UBERON:0006603,1.20e-08,120;UBERON:0002100,2.71e-08,90;UBERON:0005256,6.30e-08,45;UBERON:0000949,8.23e-08,72;UBERON:0003104,4.94e-07,61;UBERON:0009142,4.94e-07,61;UBERON:0009569,6.66e-07,66;UBERON:0003408,7.19e-07,24;UBERON:0001004,9.62e-07,42 | |||
|phase1_expression=3.52327463630547,5.58360652222978,1.81999695755814,5.74682001482977,5.00895729946347,4.36486106970913,3.27057696833736,37.187517151174,3.51971805379167,4.44722600011788,2.73948749160808,5.66382328866889,35.0961496358972,37.9404546498449,9.66018309265422,10.7311891716608,5.59649502502517,23.8173934845469,27.4228867211478,16.5511964201232,7.05859308253879,8.53902180327614,7.57479388502913,5.59973479776923,3.67054849707472,4.01962374880514,3.01533397311352,3.01659725760245,8.36103045608045,9.07308467135751,4.8780712344167,5.71527606113668,0.61506478758457,0,8.37669697278696,9.14290549471708,9.39179038806898,17.996860121687,15.626706890476,21.9879972468995,15.2940186888064,15.7100461540443,16.9928623560904,13.5968563413623,12.9762471960979,2.9367480345869,7.04152209913235,0.872100625521786,3.73466510648602,1.74986909166855,2.79972843250725,0,8.55691290894455,13.0565185562042,14.7881271622684,5.65970759279083,4.58453503902011,10.8291139378263,0.202316460859598,0,0.633831403506179,3.38844532069132,7.11435836888911,6.74924787961049,4.94433181283487,5.6838409195688,2.09720077362883,2.30530983192933,0.829516898467821,0.405017814995072,0.630974884054146,0.571301968807607,0.883474163806454,0.61245399607477,0.191690942036473,0,3.30347642998166,2.42605942361857,2.76491759861238,0.131886287730194,0.182975287204819,0.52091337055676,1.3959149950069,2.25105044012672,2.59757021220577,2.06240009831567,1.99320353118744,0.931997229126503,3.71058347332602,6.04572480854284,20.5803786978191,6.88339101585109,4.0798280022465,5.39703191637817,7.14754059192436,8.06448396775204,7.5839986871146,2.38602451609281,2.85764605063156,1.7666978725517,4.64783285263046,2.56652954828636,0,7.11066703153331,2.59789249213457,3.04031838570118,3.0331466700887,8.22123933977232,27.188477782953,11.2816025689267,2.4287945747259,6.39377504455497,7.14908041493781,11.1534754008941,9.7598626922635,8.04266184509923,4.94389935468748,9.54355755671417,14.153768831198,2.75003644910596,5.96272099843063,8.24287930329878,3.72783522436244,0.292780797011547,1.8850203613211,9.96282515313506,6.35020159881377,2.39961092397363,4.44745794755726,1.3481157546434,1.37250180845588,0.628271760564322,1.73824320192276,1.02286182932132,2.90903262383384,1.78465389374533,4.9901288286655,7.46441823660558,6.06534620240819,5.89237196482127,2.21204753036596,1.60931473103431,2.52086981727489,2.56198190320716,2.31324097114515,2.8185018462667,2.06143794031403,3.62184719034622,2.15567992932842,2.64748512234947,1.75951124163949,1.31517439456545,2.22437799380478,1.39300866608867,1.4404749548556,3.98068533636986,4.21327912387941,1.02939162845886,7.672414483681,1.86413195281952,1.40715635988658,2.88099298337624,0.946978942340841,2.95146347621106,3.5481435964097,3.0229412817553,3.21928081679543,2.56883753207773,3.62031669809657,6.07419617092652,6.48550476366846,6.14039947186396,7.90380415047782,5.90508242545636,2.94405927989778,1.44066457330998,15.5296828002385,8.72686869989696,3.19932375802851,3.94802342162745,3.47942145569652,3.83198696784351,4.00280478920767,5.89699440948933,6.64340686162316,4.94096864172033,7.79139147280835,5.96869416123452,8.57841983324129,6.29173586057955,9.72621224436124,7.56736838366595,1.51734320762465,2.62771579002376,2.25415471346161,3.46207257337034,6.20647958936402,4.48869247298039,6.45012678667424,7.82333784291891,8.63493003127561,5.18268088471562,8.89357881261447,4.00428253718626,6.6830058338489,4.94696647246678,4.26006254915856,4.3411888755435,4.58326533206556,9.49397253587675,5.5125977103512,7.4131581560782,25.8782771749238,10.7920874823866,13.1055822708115,9.34541848404313,9.68746033018326,6.27176577772377,15.1497615936616,2.08440552947533,1.14075483509418,3.56464680127895,3.05097322775053,5.69521275302174,9.04565835366852,6.24427673144956,8.35466263762812,9.08005227559977,10.3645599627367,17.0417847304368,21.0675677876393,17.0685889126184,27.142431109069,28.8270012423916,8.85175691434265,19.591508987636,2.24770825982909,1.99259867206745,3.93443868904021,3.53459298086122,2.52406575533005,3.12350995437311,3.66219776145758,4.06246956519338,3.11918143715352,5.66153061577665,4.45291771842384,3.21481443702443,3.55759000151871,1.92792789853084,7.38088443082997,3.38324646967785,4.72372182125371,12.7026994688852,6.63725691699814,3.64170954232472,2.41858845571801,3.58349651536206,1.18120757152309,5.84126781093462,6.71913562237375,5.45300594216258,3.92147116223193,3.79244109522979,3.16255825724996,4.12542172992747,14.2984634416591,2.52085531643834,2.8458910432206,2.35770738534752,4.43350584105684,5.52943334566419,4.77192159746151,5.17590413494819,6.8054795338476,5.50763384245932,7.71849393192367,8.07942639413252,3.71368181400583,2.47282992205439,2.14870219205646,2.62625439592098,5.53813589596716,1.48340241608408,11.1066072518604,8.46186158649212,16.1119238811649,10.360265135258,11.7557035840082,15.328137604837,10.538662659619,12.1757763521582,14.5109972494645,1.90934123603023,1.42351197111511,3.65975040828328,4.21220829205025,7.10900206449194,6.33251434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| |||
|short_description=p1@Trim21 | |||
}} |
Latest revision as of 16:03, 25 September 2015
Short description: | p1@Trim21 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim21_5end |
Coexpression cluster: | MCL_coexpression_mm9:542 |
Association with transcript: | 0bp_to_ENSMUST00000033264, ENSMUST00000106913, NM_001082552, NM_009277, uc009irw.1, uc009irx.1_5end |
EntrezGene: | Trim21 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.29e-15 | 118 |
endoderm | 3.29e-15 | 118 |
presumptive endoderm | 3.29e-15 | 118 |
subdivision of digestive tract | 5.05e-15 | 114 |
digestive system | 6.05e-15 | 116 |
digestive tract | 6.05e-15 | 116 |
primitive gut | 6.05e-15 | 116 |
foregut | 1.43e-11 | 80 |
unilaminar epithelium | 2.15e-11 | 66 |
endo-epithelium | 5.28e-11 | 69 |
gland | 1.24e-10 | 65 |
hemolymphoid system | 1.81e-10 | 48 |
immune system | 1.81e-10 | 48 |
hematopoietic system | 3.65e-10 | 45 |
blood island | 3.65e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 4.06e-10 | 35 |
gut epithelium | 1.72e-09 | 55 |
endocrine gland | 2.11e-09 | 60 |
hemopoietic organ | 7.89e-09 | 29 |
immune organ | 7.89e-09 | 29 |
mesoderm | 1.20e-08 | 120 |
mesoderm-derived structure | 1.20e-08 | 120 |
presumptive mesoderm | 1.20e-08 | 120 |
trunk | 2.71e-08 | 90 |
trunk mesenchyme | 6.30e-08 | 45 |
endocrine system | 8.23e-08 | 72 |
mesenchyme | 4.94e-07 | 61 |
entire embryonic mesenchyme | 4.94e-07 | 61 |
subdivision of trunk | 6.66e-07 | 66 |
gland of gut | 7.19e-07 | 24 |
respiratory system | 9.62e-07 | 42 |