FFCP PHASE1:Hg19::chrX:119693827..119693835,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8450 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2555 | |||
|TSSclassifier=strong | |||
|UniProt=A6NE76 | |||
|association_with_transcript=-29bp_to_ENST00000371323_5end | |||
|cluster_id=chrX:119693827..119693835,- | |||
|description=CAGE_peak_24_at_CUL4B_5end | |||
|id=chrX:119693827..119693835,- | |||
|ontology_enrichment_celltype=CL:0002620!2.09e-14!23;CL:0000055!1.56e-12!180;CL:0000057!2.76e-12!75;CL:0000222!7.44e-09!119;CL:0000144!1.09e-07!625;CL:0000548!1.15e-07!679;CL:0000004!1.15e-07!679;CL:0000255!1.15e-07!679;CL:0000012!1.80e-07!682;CL:0000077!6.28e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.02e-31;23!CL:0000138;3.38e-13;6!CL:0002602;1.34e-10;2!CL:0002593;9.19e-10;2!CL:0000153;8.17e-09;9!CL:0000447;8.17e-09;9!CL:0002595;1.80e-08;5!CL:0002564;4.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.49e-31,23;CL:0000057,2.04e-13,76;CL:0000058,3.38e-13,6;CL:0000138,3.38e-13,6;CL:0002602,1.19e-10,2;CL:0002593,1.32e-09,2;CL:0000153,8.18e-09,9;CL:0000447,8.18e-09,9;CL:0002595,1.85e-08,5;CL:0002564,4.82e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.16e-08!5;DOID:450!1.16e-08!5;DOID:66!1.16e-08!5;DOID:423!1.16e-08!5;DOID:0080000!1.16e-08!5;DOID:11722!1.16e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;4.63e-23;5!DOID:450;4.63e-23;5!DOID:66;4.63e-23;5!DOID:423;4.63e-23;5!DOID:0080000;4.63e-23;5!DOID:11722;4.63e-23;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.29e-23,5;DOID:450,3.29e-23,5;DOID:66,3.29e-23,5;DOID:423,3.29e-23,5;DOID:0080000,3.29e-23,5;DOID:11722,3.29e-23,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.22e-09!45;UBERON:0002416!3.22e-09!45;UBERON:0002097!4.99e-08!40;UBERON:0003102!8.21e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.66e-15;5!UBERON:0002216;2.66e-15;5!UBERON:0011134;2.66e-15;5!UBERON:0002209;2.66e-15;5!UBERON:0002213;2.66e-15;5!UBERON:0007844;2.66e-15;5!UBERON:0011138;2.66e-15;5!UBERON:0001130;2.66e-15;5!UBERON:0001066;2.66e-15;5!UBERON:0001468;2.66e-15;5!UBERON:0002097;3.68e-12;41!UBERON:0006444;1.34e-10;2!UBERON:0001995;1.34e-10;2!UBERON:0004715;1.34e-10;2!UBERON:0002456;9.19e-10;2!UBERON:0004905;1.35e-09;8!UBERON:0000982;1.35e-09;8!UBERON:0004770;1.35e-09;8!UBERON:0002199;1.39e-09;46!UBERON:0002416;1.39e-09;46!UBERON:0003834;1.80e-08;5!UBERON:0001533;1.80e-08;5!UBERON:0002418;2.48e-07;3!UBERON:0004755;2.48e-07;3!UBERON:0003102;2.48e-07;50!UBERON:0002242;4.32e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.50e-16,41;UBERON:0011135,2.77e-15,5;UBERON:0002216,2.77e-15,5;UBERON:0011134,2.77e-15,5;UBERON:0002209,2.77e-15,5;UBERON:0002213,2.77e-15,5;UBERON:0005856,2.77e-15,5;UBERON:0005866,2.77e-15,5;UBERON:0005863,2.77e-15,5;UBERON:0007844,2.77e-15,5;UBERON:0011138,2.77e-15,5;UBERON:0001130,2.77e-15,5;UBERON:0001066,2.77e-15,5;UBERON:0001468,2.77e-15,5;UBERON:0002199,3.00e-14,46;UBERON:0002416,3.00e-14,46;UBERON:0006444,1.19e-10,2;UBERON:0001995,1.19e-10,2;UBERON:0004715,1.19e-10,2;UBERON:0002456,1.32e-09,2;UBERON:0004905,1.38e-09,8;UBERON:0000982,1.38e-09,8;UBERON:0004770,1.38e-09,8;UBERON:0003834,1.85e-08,5;UBERON:0001533,1.85e-08,5;UBERON:0002418,2.29e-07,3;UBERON:0004755,2.29e-07,3;UBERON:0003102,3.91e-07,99;UBERON:0002242,4.82e-07,3;UBERON:0003068,4.82e-07,3;UBERON:0002328,4.82e-07,3;UBERON:0004880,4.82e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.704772020479856,0,0.893922188854576,0,0,0.631719873426831,0,0.245733936501509,0,0,0,3.46545788288131,4.30816588446291,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,0.255725123687061,10.1202962667679,8.02140657017423,7.53201898596283,0,1.45990461090791,0.283604451492204,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0.208994966536811,2.06733407335463,1.06729878806013,0.66944122552934,0,0,0,0.367663080345869,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,1.24484414159907,0.134710672069688,0.817309515567294,0,0,0,0.312160076830321,0,0,0,0,0,0.408308342509787,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0.277064115484183,0,0,0.45071417671979,1.13432183160021,1.79389635688862,3.41691822109708,3.39091041855299,1.50045548042201,5.15262646192194,3.34932702059318,2.23340227597908,0.843881661206331,2.24105111870757,3.28163906517349,5.33889412125336,1.61646056818812,2.13005755509969,1.81353776809752,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.517086863031111,0,0,1.59562869950922,5.2003718455683,0.257207374262142,0,0,0.857867961948885,0,0,0.65147236858747,1.42156779497018,1.58390374586686,9.34462068884717,6.10073421020206,4.39881161201051,0,0,0,0.958499421966331,0,0,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,4.2942022101699,0,1.35632511849868,4.15941723061614,0.892144943985809,0.946214490203608,0.937131319941706,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0.715624433709956,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.842516912477962,0,1.46228093778771,1.05650146756755,0.272999822815972,0,0,1.65409603063837,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0.622079175323615,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0.661983911750998,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,1.15149118391667,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52898729547258,0,0.144921028610825,0.447764408660622,0,0,0.378806010550178,0.50313580350515,0,0,0,0.310874401165561,0,0.477890301491107,0,0.310525913752519,0,0,0,1.6528336989694,3.42724690951916,0,0,0.322231671127465,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0.680117776536817,0,0.97894681802587,2.14906609297785,0,0.219284049578707,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@CUL4B | |||
}} |
Latest revision as of 06:27, 19 September 2015
Short description: | p24@CUL4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_CUL4B_5end |
Coexpression cluster: | NA |
Association with transcript: | -29bp_to_ENST00000371323_5end |
EntrezGene: | CUL4B |
HGNC: | 2555 |
UniProt: | A6NE76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.49e-31 | 23 |
fibroblast | 2.04e-13 | 76 |
chondroblast | 3.38e-13 | 6 |
chondrocyte | 3.38e-13 | 6 |
annulus pulposus cell | 1.19e-10 | 2 |
smooth muscle cell of the internal thoracic artery | 1.32e-09 | 2 |
GAG secreting cell | 8.18e-09 | 9 |
carbohydrate secreting cell | 8.18e-09 | 9 |
smooth muscle cell of the subclavian artery | 1.85e-08 | 5 |
nucleus pulposus cell of intervertebral disc | 4.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.50e-16 | 41 |
intervertebral cartilage | 2.77e-15 | 5 |
symphysis | 2.77e-15 | 5 |
nonsynovial joint | 2.77e-15 | 5 |
fibrous joint | 2.77e-15 | 5 |
cartilaginous joint | 2.77e-15 | 5 |
developing mesenchymal condensation | 2.77e-15 | 5 |
pre-cartilage condensation | 2.77e-15 | 5 |
cartilaginous condensation | 2.77e-15 | 5 |
cartilage element | 2.77e-15 | 5 |
post-cranial axial skeletal system | 2.77e-15 | 5 |
vertebral column | 2.77e-15 | 5 |
intervertebral disk | 2.77e-15 | 5 |
intervertebral joint | 2.77e-15 | 5 |
integument | 3.00e-14 | 46 |
integumental system | 3.00e-14 | 46 |
annulus fibrosus | 1.19e-10 | 2 |
fibrocartilage | 1.19e-10 | 2 |
annulus fibrosus disci intervertebralis | 1.19e-10 | 2 |
internal thoracic artery | 1.32e-09 | 2 |
articulation | 1.38e-09 | 8 |
skeletal joint | 1.38e-09 | 8 |
articular system | 1.38e-09 | 8 |
thoracic segment blood vessel | 1.85e-08 | 5 |
subclavian artery | 1.85e-08 | 5 |
cartilage tissue | 2.29e-07 | 3 |
skeletal tissue | 2.29e-07 | 3 |
surface structure | 3.91e-07 | 99 |
nucleus pulposus | 4.82e-07 | 3 |
axial mesoderm | 4.82e-07 | 3 |
notochord | 4.82e-07 | 3 |
chordamesoderm | 4.82e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.29e-23 | 5 |
myotonic disease | 3.29e-23 | 5 |
muscle tissue disease | 3.29e-23 | 5 |
myopathy | 3.29e-23 | 5 |
muscular disease | 3.29e-23 | 5 |
myotonic dystrophy | 3.29e-23 | 5 |