FFCP PHASE1:Mm9::chr10:88348677..88348687,+: Difference between revisions
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|id=chr10:88348677..88348687,+
|short_description=p4@Slc5a8
|description=CAGE_peak_4_at_Slc5a8_5end
|association_with_transcript=-49bp_to_ENSMUST00000020255,NM_1454...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=216225 | |EntrezGene=216225 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1926 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BYF6 | |UniProt=Q8BYF6 | ||
|association_with_transcript=-49bp_to_ENSMUST00000020255,NM_145423,uc007grz.1_5end | |||
|cluster_id=chr10:88348677..88348687,+ | |||
|description=CAGE_peak_4_at_Slc5a8_5end | |||
|id=chr10:88348677..88348687,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.25e-09!6;CL:0000677!5.25e-09!6;CL:0000212!5.25e-09!6;CL:0000584!5.25e-09!6;CL:0000075!1.59e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.89e-17,6;CL:0000677,7.89e-17,6;CL:0000584,7.89e-17,6;CL:0000075,2.52e-14,7;CL:0002563,5.57e-11,9;CL:0002251,5.57e-11,9;CL:0000682,1.52e-09,3;CL:0000066,7.94e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.69e-10!43;UBERON:0000344!3.97e-10!15;UBERON:0001242!4.44e-08!13;UBERON:0000060!4.44e-08!13;UBERON:0001262!4.44e-08!13;UBERON:0004786!4.44e-08!13;UBERON:0001008!1.74e-07!17;UBERON:0005409!3.37e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.95e-21,15;UBERON:0001242,1.40e-16,13;UBERON:0001262,1.40e-16,13;UBERON:0004786,1.40e-16,13;UBERON:0000160,1.97e-12,31;UBERON:0004923,3.49e-12,24;UBERON:0002113,2.12e-11,14;UBERON:0003918,2.12e-11,14;UBERON:0011143,2.12e-11,14;UBERON:0005095,2.12e-11,14;UBERON:0007687,2.12e-11,14;UBERON:0003350,5.57e-11,9;UBERON:0004808,5.57e-11,9;UBERON:0001277,5.57e-11,9;UBERON:0001008,5.28e-10,19;UBERON:0000331,1.84e-09,3;UBERON:0002116,1.84e-09,3;UBERON:0001204,1.84e-09,3;UBERON:0001168,1.84e-09,3;UBERON:0000485,7.50e-09,11;UBERON:0006554,1.43e-08,18;UBERON:0005409,1.44e-08,47;UBERON:0002108,3.54e-07,4;UBERON:0000489,3.69e-07,21 | |||
|phase1_expression=0,12.9120900826564,15.0149748998547,3.93203474698879,9.5170188689806,2.51818907867835,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.59992422793407,4.35877634027623,13.7815671387605,8.18447792702242,6.89507944594845,9.88121781173144,5.04060259519861,8.42575940490158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0.201683524623343,0,0.380451252225118,2.37264530772256,0.329397909448022,0.754005626400808,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.796565093017469,0,0.342745537829186,3.38123207019241,2.03651327845314,3.49114476901726,3.0158402552837,4.80597682144355,7.52811754695971,7.84993639206874,10.488758933353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0,0.482503399425247,1.55184047204077,1.80554989719567,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,3.88844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.19318959403219,1.12609485270709,0.915758121336325,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,12.9120900826564,15.0149748998547,3.93203474698879,9.5170188689806,2.51818907867835,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,1.59992422793407,4.35877634027623,13.7815671387605,8.18447792702242,6.89507944594845,9.88121781173144,5.04060259519861,8.42575940490158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.793351699990633,0,0,0,0.201683524623343,0,0.380451252225118,2.37264530772256,0.329397909448022,0.754005626400808,0.596869416123452,0.779856348476481,0.898819408654221,1.08069024937347,0.796565093017469,0,0.342745537829186,3.38123207019241,2.03651327845314,3.49114476901726,3.0158402552837,4.80597682144355,7.52811754695971,7.84993639206874,10.488758933353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0,0.482503399425247,1.55184047204077,1.80554989719567,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,3.88844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,0.19318959403219,1.12609485270709,0.915758121336325,1.07184189539533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0.561142271657738,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0.429742108096597,0,0,0 | ||
|short_description=p4@Slc5a8 | |||
}} | }} |
Latest revision as of 13:41, 26 September 2015
Short description: | p4@Slc5a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc5a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1926 |
Association with transcript: | -49bp_to_ENSMUST00000020255, NM_145423, uc007grz.1_5end |
EntrezGene: | Slc5a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.89e-17 | 6 |
gut absorptive cell | 7.89e-17 | 6 |
enterocyte | 7.89e-17 | 6 |
columnar/cuboidal epithelial cell | 2.52e-14 | 7 |
intestinal epithelial cell | 5.57e-11 | 9 |
epithelial cell of alimentary canal | 5.57e-11 | 9 |
M cell of gut | 1.52e-09 | 3 |
epithelial cell | 7.94e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.95e-21 | 15 |
intestinal mucosa | 1.40e-16 | 13 |
wall of intestine | 1.40e-16 | 13 |
gastrointestinal system mucosa | 1.40e-16 | 13 |
intestine | 1.97e-12 | 31 |
organ component layer | 3.49e-12 | 24 |
kidney | 2.12e-11 | 14 |
kidney mesenchyme | 2.12e-11 | 14 |
upper urinary tract | 2.12e-11 | 14 |
kidney rudiment | 2.12e-11 | 14 |
kidney field | 2.12e-11 | 14 |
epithelium of mucosa | 5.57e-11 | 9 |
gastrointestinal system epithelium | 5.57e-11 | 9 |
intestinal epithelium | 5.57e-11 | 9 |
renal system | 5.28e-10 | 19 |
ileal mucosa | 1.84e-09 | 3 |
ileum | 1.84e-09 | 3 |
mucosa of small intestine | 1.84e-09 | 3 |
wall of small intestine | 1.84e-09 | 3 |
simple columnar epithelium | 7.50e-09 | 11 |
urinary system structure | 1.43e-08 | 18 |
gastrointestinal system | 1.44e-08 | 47 |
small intestine | 3.54e-07 | 4 |
cavitated compound organ | 3.69e-07 | 21 |