FFCP PHASE1:Hg19::chr9:13432977..13433050,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:13432977..13433050,- | |||
|coexpression_cluster_id=C1506 | |||
|description=CAGE_peak_at_chr9:13432977..13433050,- | |||
|id=chr9:13432977..13433050,- | |||
|ontology_enrichment_celltype=CL:0002139!5.03e-36!24;CL:0000115!2.23e-33!35;CL:0000071!5.14e-27!18;CL:0002546!5.14e-27!18;CL:0002078!2.83e-24!44;CL:0000213!2.41e-16!57;CL:0000215!2.41e-16!57;CL:1000413!2.61e-14!9;CL:0005020!1.58e-10!6;CL:0002138!1.58e-10!6;CL:0005022!1.58e-10!6;CL:0002544!5.07e-10!6;CL:0002543!7.69e-10!6;CL:0000222!2.93e-09!119;CL:0000076!5.70e-08!62;CL:0000622!9.76e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.33e-80;24!CL:0000115;1.92e-63;36!CL:0000071;3.24e-59;18!CL:0002078;2.96e-37;45!CL:1000413;2.51e-30;9!CL:0000213;3.28e-27;58!CL:0000215;3.28e-27;58!CL:0002138;8.81e-22;6!CL:0002544;1.27e-20;6!CL:0002543;3.21e-20;6!CL:0000076;5.29e-12;63!CL:0002144;7.35e-12;3!CL:0002188;5.99e-11;5!CL:0002618;7.57e-11;3!CL:0000622;1.70e-10;5!CL:0000154;9.36e-09;6!CL:0002545;4.53e-08;2!CL:1000746;7.98e-08;7!CL:1000612;7.98e-08;7!CL:0000317;2.99e-07;2!CL:1000448;2.99e-07;2!CL:0002308;2.99e-07;2!CL:0002140;2.99e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.90e-80,24;CL:0000115,2.46e-75,36;CL:0000071,3.09e-59,18;CL:0002546,3.09e-59,18;CL:0002078,1.19e-58,45;CL:0000213,1.07e-43,58;CL:0000215,1.07e-43,58;CL:1000413,2.43e-30,9;CL:0000222,2.19e-24,121;CL:0005020,8.82e-22,6;CL:0002138,8.82e-22,6;CL:0005022,8.82e-22,6;CL:0000076,1.20e-20,63;CL:0002544,1.23e-20,6;CL:0002543,3.16e-20,6;CL:0002321,1.07e-12,250;CL:0002144,7.35e-12,3;CL:0002188,6.40e-11,5;CL:0002618,7.57e-11,3;CL:0000622,1.50e-10,5;CL:0000066,2.28e-09,253;CL:0000154,8.43e-09,6;CL:0002545,4.46e-08,2;CL:1000746,8.35e-08,7;CL:1000612,8.35e-08,7;CL:0000317,2.54e-07,2;CL:1000448,2.54e-07,2;CL:0002308,2.54e-07,2;CL:0002140,2.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002546;3.24e-59;18!CL:0005022;8.81e-22;6!CL:0000222;1.26e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.14e-27!18;UBERON:0004638!5.14e-27!18;UBERON:0004852!5.14e-27!18;UBERON:0000055!8.79e-26!69;UBERON:0004111!8.38e-23!241;UBERON:0000487!7.04e-21!22;UBERON:0002049!9.86e-21!79;UBERON:0007798!9.86e-21!79;UBERON:0000477!1.27e-20!286;UBERON:0004872!8.95e-20!84;UBERON:0004535!1.86e-19!110;UBERON:0001009!1.97e-19!113;UBERON:0001981!3.05e-19!60;UBERON:0007500!3.05e-19!60;UBERON:0004537!3.05e-19!60;UBERON:0006965!3.05e-19!60;UBERON:0006914!1.37e-17!25;UBERON:0000025!2.96e-16!194;UBERON:0003914!1.80e-14!118;UBERON:0003915!2.61e-14!9;UBERON:0004700!2.61e-14!9;UBERON:0001917!2.61e-14!9;UBERON:0000483!4.16e-12!309;UBERON:0007023!4.23e-12!115;UBERON:0002465!7.98e-12!10;UBERON:0000119!9.07e-12!312;UBERON:0001473!5.13e-10!8;UBERON:0004536!5.13e-10!8;UBERON:0006558!5.13e-10!8;UBERON:0000467!7.70e-10!625;UBERON:0000480!9.12e-10!626;UBERON:0001637!1.43e-08!42;UBERON:0003509!1.43e-08!42;UBERON:0004572!1.43e-08!42;UBERON:0000468!1.87e-08!659;UBERON:0001638!8.42e-08!9;UBERON:0003920!8.42e-08!9;UBERON:0004582!8.42e-08!9;UBERON:0002298!1.45e-07!8;UBERON:0000490!1.95e-07!138;UBERON:0003103!3.97e-07!69;UBERON:0004573!4.29e-07!33;UBERON:0004571!4.29e-07!33;UBERON:0000948!6.58e-07!24;UBERON:0005498!6.58e-07!24;UBERON:0004140!6.58e-07!24;UBERON:0009881!6.58e-07!24;UBERON:0004141!6.58e-07!24;UBERON:0003084!6.58e-07!24;UBERON:0007005!6.58e-07!24;UBERON:0004139!6.58e-07!24;UBERON:0004291!6.58e-07!24;UBERON:0007100!9.96e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.24e-59;18!UBERON:0001986;3.24e-59;18!UBERON:0004852;3.24e-59;18!UBERON:0000487;1.51e-47;22!UBERON:0006914;3.01e-41;25!UBERON:0003915;2.51e-30;9!UBERON:0004700;2.51e-30;9!UBERON:0001917;2.51e-30;9!UBERON:0000490;1.17e-27;33!UBERON:0002465;2.02e-21;10!UBERON:0001473;3.45e-21;8!UBERON:0004536;3.45e-21;8!UBERON:0006558;3.45e-21;8!UBERON:0000055;1.06e-20;65!UBERON:0007500;1.94e-15;56!UBERON:0001981;1.94e-15;56!UBERON:0004537;1.94e-15;56!UBERON:0002049;4.31e-14;75!UBERON:0007798;4.31e-14;75!UBERON:0001638;3.05e-13;9!UBERON:0003920;3.05e-13;9!UBERON:0004582;3.05e-13;9!UBERON:0010523;7.35e-12;3!UBERON:0001915;7.35e-12;3!UBERON:0001982;7.35e-12;3!UBERON:0003914;3.72e-11;74!UBERON:0001009;3.08e-09;112!UBERON:0004535;4.79e-09;109!UBERON:0001637;9.75e-09;42!UBERON:0003509;9.75e-09;42!UBERON:0004572;9.75e-09;42!UBERON:0004111;3.17e-08;130!UBERON:0005800;4.53e-08;2!UBERON:0001515;4.53e-08;2!UBERON:0000074;7.98e-08;7!UBERON:0001229;7.98e-08;7!UBERON:0000025;2.09e-07;93!UBERON:0002419;2.99e-07;2!UBERON:0007771;2.99e-07;2!UBERON:0003297;2.99e-07;2!UBERON:0001821;2.99e-07;2!UBERON:0003487;2.99e-07;2!UBERON:0001820;2.99e-07;2!UBERON:0002405;5.10e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.09e-59,18;UBERON:0001986,3.09e-59,18;UBERON:0004852,3.09e-59,18;UBERON:0000487,1.46e-47,22;UBERON:0006914,2.91e-41,25;UBERON:0000055,2.35e-38,68;UBERON:0002049,2.16e-32,78;UBERON:0007798,2.16e-32,78;UBERON:0003915,2.43e-30,9;UBERON:0004700,2.43e-30,9;UBERON:0001917,2.43e-30,9;UBERON:0004535,6.20e-28,109;UBERON:0001009,6.03e-27,112;UBERON:0007500,6.28e-25,59;UBERON:0001981,6.28e-25,59;UBERON:0004537,6.28e-25,59;UBERON:0006965,6.28e-25,59;UBERON:0004872,5.65e-23,83;UBERON:0002465,1.87e-21,10;UBERON:0001473,3.02e-21,8;UBERON:0004536,3.02e-21,8;UBERON:0006558,3.02e-21,8;UBERON:0003914,5.96e-20,117;UBERON:0004111,9.15e-18,240;UBERON:0001638,3.02e-13,9;UBERON:0003920,3.02e-13,9;UBERON:0004582,3.02e-13,9;UBERON:0000025,1.64e-12,192;UBERON:0010523,7.35e-12,3;UBERON:0001915,7.35e-12,3;UBERON:0001982,7.35e-12,3;UBERON:0001637,4.95e-09,42;UBERON:0003509,4.95e-09,42;UBERON:0004572,4.95e-09,42;UBERON:0000483,5.19e-09,306;UBERON:0000490,5.60e-09,148;UBERON:0000119,7.85e-09,309;UBERON:0003081,3.43e-08,203;UBERON:0005800,4.46e-08,2;UBERON:0001515,4.46e-08,2;UBERON:0010532,8.35e-08,7;UBERON:0000074,8.35e-08,7;UBERON:0001229,8.35e-08,7;UBERON:0001230,8.35e-08,7;UBERON:0003220,8.35e-08,7;UBERON:0005749,8.35e-08,7;UBERON:0004199,8.35e-08,7;UBERON:0004209,8.35e-08,7;UBERON:0004198,8.35e-08,7;UBERON:0002419,2.54e-07,2;UBERON:0007771,2.54e-07,2;UBERON:0003297,2.54e-07,2;UBERON:0001821,2.54e-07,2;UBERON:0003487,2.54e-07,2;UBERON:0001820,2.54e-07,2;UBERON:0005089,2.54e-07,2;UBERON:0005088,2.54e-07,2;UBERON:0005103,7.92e-07,8;UBERON:0000083,7.92e-07,8;UBERON:0009201,7.92e-07,8;UBERON:0006553,7.92e-07,8;UBERON:0003074,7.92e-07,8;UBERON:0003060,7.92e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,2.68280343881454,4.85877735005415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1121309230361,14.6239881168041,10.7613555498354,13.0020826642522,28.1064622260637,17.8826727261044,24.6614060513436,103.366703667732,61.1917971821142,167.360306382335,76.9403995678471,301.828025970249,83.7132857390221,34.1926664721658,9.72170337458112,16.6097494608388,4.71511682514957,7.65758067286591,7.66583187329416,27.5287041274757,11.9081133554765,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,10.1033004052266,2.94231425604226,0,0,0,0,6.84566185853339,0,0,0,0,0,0,0,0,0,1.82032272387605,0,0,0,0,0,0,0,0.680593098960126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0.738155454624648,19.6338483324824,0,0,0,0,0,0,0,0,1.20725313949488,1.1240175325762,0.502644862058154,0.0925884451585296,0,0,0,0,0,52.838119880553,30.5570438300563,78.7652190251237,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,1.91691339582606,0,0,0,0,0.12624243342638,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,3.58309802723109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,3.4120015221269,3.40187410553031,8.42072072798343,15.4227252690289,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,4.01985876597321,1.95018073810956,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0.924100740528266,0.532306030317022,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,1.2130948894399,0,1.26377536871694,0,0,0,0,0,0,0,0.66343897524122,3.5076070820301,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,0.670302275535787,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0.121360521749513,0,0,0,0,0,0,0,0.779160935160341,0,0,0.19924798825107,0,0,0,0,0,0.0898683511473268,0,0,2.76201535783414,0,0,0,0.0927680981618513,0,0,0,6.52499617891314,0,0,0,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0,0,0.538651809526579,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.796118080530053,0,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42472541221049,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,4.30723814746088,0,0,0.223171457441873,0.470284307407084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0.39669780522807,0,0,0.213574825135389,0,0,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0.573409195690071,1.55300672151593,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,1.11507737014592,0,0.155262956876259,0,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0,0.751873899297419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0.504143392443436,0,0.161475645631851,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,1.36597314810779,0.0887023701626388,0,0,0.747667062745149,0,0,0.111231401892069,0.627944742804112,0,0,0,0,0,0.0714765441766563,0,0,0,0,8.49586273068451,2.56077715640925,0.691259661814092,0.860454717640555,0,0,0,0,0,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.926089897295336,0,0,0,0,0,0.297046400327086,2.9585900930838,0,0,0,0,0,0,0,0,0,0.573358332605805,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0,0,0.103432995861895,0.639701945702943,0,0,0.372448285775147,0.112131862580613,9.29248510861207,0.404234377916439,0,0.342233301085281,0.0673520530145875,2.29511057256564,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr9:13432977..13433050,- | |||
}} |
Latest revision as of 23:41, 31 July 2015
Short description: | p@chr9:13432977..13433050, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:13432977..13433050, - |
Coexpression cluster: | C1506_Endothelial_Lymphatic_Hepatic_Renal_breast_heart_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.90e-80 | 24 |
endothelial cell | 2.46e-75 | 36 |
blood vessel endothelial cell | 3.09e-59 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.09e-59 | 18 |
meso-epithelial cell | 1.19e-58 | 45 |
lining cell | 1.07e-43 | 58 |
barrier cell | 1.07e-43 | 58 |
endothelial cell of artery | 2.43e-30 | 9 |
mesodermal cell | 2.19e-24 | 121 |
lymphangioblast | 8.82e-22 | 6 |
endothelial cell of lymphatic vessel | 8.82e-22 | 6 |
vascular lymphangioblast | 8.82e-22 | 6 |
squamous epithelial cell | 1.20e-20 | 63 |
aortic endothelial cell | 1.23e-20 | 6 |
vein endothelial cell | 3.16e-20 | 6 |
embryonic cell | 1.07e-12 | 250 |
capillary endothelial cell | 7.35e-12 | 3 |
glomerular endothelial cell | 6.40e-11 | 5 |
endothelial cell of umbilical vein | 7.57e-11 | 3 |
acinar cell | 1.50e-10 | 5 |
epithelial cell | 2.28e-09 | 253 |
protein secreting cell | 8.43e-09 | 6 |
thoracic aorta endothelial cell | 4.46e-08 | 2 |
glomerular cell | 8.35e-08 | 7 |
kidney corpuscule cell | 8.35e-08 | 7 |
sebum secreting cell | 2.54e-07 | 2 |
epithelial cell of sweat gland | 2.54e-07 | 2 |
epithelial cell of skin gland | 2.54e-07 | 2 |
acinar cell of sebaceous gland | 2.54e-07 | 2 |