FFCP PHASE1:Hg19::chr8:49831523..49831551,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr8:49831523..49831551,- | |||
|coexpression_cluster_id=C4759 | |||
|description=CAGE_peak_at_chr8:49831523..49831551,- | |||
|id=chr8:49831523..49831551,- | |||
|ontology_enrichment_celltype=CL:0000055!5.29e-23!180;CL:0000057!2.00e-17!75;CL:0002371!3.21e-09!591;CL:0002620!5.25e-08!23;CL:0002334!1.02e-07!12;CL:0000499!1.21e-07!27;CL:0000144!3.05e-07!625;CL:0000220!3.56e-07!246;CL:0002321!7.80e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.38e-11;55!CL:0000723;6.84e-10;61!CL:0002334;7.85e-10;12!CL:0000048;1.26e-09;58!CL:0000499;8.09e-08;28!CL:0002620;9.29e-08;23!CL:0000034;1.33e-07;69!CL:0002320;1.94e-07;188!CL:0000349;2.01e-07;19!CL:0002570;7.90e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.11e-14,76;CL:0002334,5.59e-10,12;CL:0000499,4.35e-08,28;CL:0002620,4.65e-08,23;CL:0000723,1.34e-07,433;CL:0000349,2.13e-07,19;CL:0000048,4.48e-07,427;CL:0002570,5.10e-07,8;CL:0000034,7.75e-07,441;CL:0002159,8.12e-07,14;CL:0002077,8.75e-07,34 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.81e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.37e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.13e-17!95;UBERON:0002199!1.08e-10!45;UBERON:0002416!1.08e-10!45;UBERON:0000486!2.60e-09!82;UBERON:0002097!3.47e-09!40;UBERON:0004923!4.34e-09!57;UBERON:0000914!8.49e-09!83;UBERON:0002329!8.49e-09!83;UBERON:0003077!8.49e-09!83;UBERON:0003059!8.49e-09!83;UBERON:0007282!8.49e-09!83;UBERON:0009618!8.49e-09!83;UBERON:0007285!8.49e-09!83;UBERON:0000475!9.40e-09!365;UBERON:0000468!1.92e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.15e-08;9!UBERON:0000042;7.15e-08;9!UBERON:0002384;9.51e-08;198!UBERON:0002199;2.17e-07;46!UBERON:0002416;2.17e-07;46!UBERON:0003102;3.21e-07;50!UBERON:0002097;4.52e-07;41!UBERON:0001013;4.61e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.89e-12,99;UBERON:0002199,9.41e-11,46;UBERON:0002416,9.41e-11,46;UBERON:0002097,2.46e-09,41;UBERON:0004923,2.86e-07,66;UBERON:0001013,3.33e-07,14 | |||
|phase1_expression=5.4503513781167,7.06531728840244,3.80576891059122,5.00366491765652,3.12872766099101,3.48935409640147,2.53299878168311,0.631719873426831,1.04474251279935,1.47440361900905,0,7.64544802455603,5.01157258634062,2.22779435328084,0.994192127183747,0.672325146451775,1.20538905604795,0.730310090387373,1.46379839637152,0.984968464614303,1.63200552995402,0.626909442956176,0.286235987131057,0.684372125364421,0.125542639594803,0,0,0,0,0,0,1.83884244895785,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,1.15076305659177,5.06014813338393,2.50668955317945,3.47631645505977,3.9764297352555,2.43317435151318,0.850813354476611,1.77383517970051,0.87834785693126,0.130979075497713,2.18577172975525,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,2.18047026071267,3.47880366186723,1.51956613997496,1.32409180813219,0.860509862246441,3.19201543978521,1.68203280042692,0,0.24666754841716,2.8008993185979,1.75123873690594,0.980771418680752,2.72443369760877,0,1.17160715916898,1.24864030732128,0.570471821544449,3.58676833324323,2.70099346880659,1.78060238804945,1.96631129383148,0.816616685019573,0.859840221182376,2.27316718586684,0,1.48360157567134,0.910161361938026,2.87447256726495,0.841680569770331,2.00189631795143,0.277064115484183,2.63386572528503,2.45190236639216,0.600952235626387,1.24775401476023,2.69084453533293,2.56268866582281,3.17897851739343,0.300091096084402,2.37020817248409,0.515281080091258,2.41951913231067,1.35021065793013,3.41029518064195,1.7670364197088,2.48534726334208,3.87950536365149,2.13005755509969,2.82105875037393,1.69560592310488,3.09217365061275,4.63668405004419,0.860413786167011,0,0,0.232387885739037,0.207322110030741,0,0,0,4.5026865673502,0,6.50115099244771,9.38443326170461,0.473227200159376,0.505754070234305,0.241011029883482,0.992645754591546,1.52515610864684,0.474541238222193,0.404493924480493,0,0,1.4763109092493,2.80483547606892,0.8231480226628,1.47008711385542,1.26755034821831,0,0.590789906681404,0,0,1.54411029268673,3.95101027471052,0,3.11639814476056,3.33318402570707,0.651616610620649,2.07986957055916,1.44331342025273,0.811512834825538,0.70445216541493,0.288732895522148,0,0,0,0,0,0,0,1.87467667973554,5.20744597416465,4.96212840348353,3.49278238541108,2.03443756959773,1.15014803749563,0,0,0,0,0,2.22242630022592,3.05590740446622,0,0,2.15937734676979,2.40274446275134,4.85904935471983,2.69114602428866,1.74384027533312,2.27348686044945,1.03417372606222,7.15312891703765,1.690605505112,0.797814349754612,3.12022310734098,3.08648849114571,0,1.8649552531127,2.43062589218851,7.5967024754802,1.64648067356154,1.62868092146868,1.42156779497018,0.791951872933429,1.20575750823834,0.871533458600294,0.899756920638513,0,0,0,2.63587341040741,1.14861935834114,1.42636905040718,3.76431397335706,2.26023954805422,4.29746311775749,0,0,0,0,0.508189248444927,0,0,0.167516265334349,1.27587750330633,0,0,0,3.55805325985506,3.50119364741774,0.813795071099207,2.70362119990049,10.3488813502354,2.36553622550902,0.585707074963566,0,0,1.03473071292505,2.65690239414175,1.10621501125022,2.17209036170207,1.95801157462741,1.37257369524342,0,0,0,2.12189300012382,9.98612637062982,7.86214762657169,3.96972492510043,1.53461973288062,4.2099014164961,3.84417447767103,3.58195074346692,5.79074116116987,2.96836132889982,4.47208112027701,3.01854933032316,2.29956036838666,4.15403543346897,2.5566283261191,0,2.80709058424599,2.4861867012692,0.574072240823034,1.27463817604702,1.96686622439136,0,0.15403067420883,0,0,0,0,0,0.215915916102139,3.08454505380579,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.412164046590889,0.366277859273374,0.082509499920588,3.44559322797703,7.15066270640173,0,2.32009723901093,1.07834031980251,1.68854042198743,1.51620229732984,3.75970857038958,5.51063436874068,2.47157219506693,1.51354460599453,3.96683796866347,5.76570202095319,1.78657797492418,1.2138933702666,6.04299214086472,0.31481234683064,0,0.308033580176089,0,0,0,0,0.744316738719335,0.949138274156178,1.33441135746677,0.767693373934002,2.99557291623744,0.318203247925937,0,1.79872457583315,3.56898138656871,2.47406044925942,0,1.58510321173008,0,0.48763373908959,0.731140468893853,0,1.36499911407986,3.11091950298168,0,0.551365343546124,0.66343897524122,0.438450885253763,2.89387767133344,0.655894752046633,0.202910376962704,0.6196469961995,0.281695602532241,1.86434757865267,0.982490410131212,0,0.354761064070598,2.9555068941673,1.97576935775941,0.75894634753143,0.699869440489966,1.25088746543166,0,1.08890984861323,0.188287601553558,4.73555909938353,5.05414427002877,2.66058092122005,4.36474460393223,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.852408440419239,0.23874448473769,2.96964680832639,4.30024982938925,0,0.281338832821026,0.667852230137435,0,1.90012867315194,0.19924798825107,0,0,0.306806047506464,0,2.17727711363265,0.539210106883961,0,0,0.394573622547734,0,1.11136990144637,0,0,0,0,0,2.17499872630438,0.910347586283997,2.2882828526349,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0.10893846351899,1.11538995422883,1.15425387755696,2.27884111694002,0,0,0,1.91400695839152,0.732780747214898,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.379119477770928,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.293977192243133,1.04471047896483,0.34945333648406,0,0.290268993867255,0.511625219603299,0.246346371159628,0.0969890164884194,0,0.677942222341597,0.959293472527256,0.397429223405979,0.0633107959558787,0.195551382734803,0.801588202515337,0.426905989478705,0.599428828746391,0,0,0.343189995723929,0,0,0.707082103850386,0.135904206073614,0,1.01998217636322,5.49006120812886,0,0,0,0,0,0.558564802544508,0.916641696046735,0,0,0.429226048136571,0,0.201550417460179,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0.367182116944987,0,0.717149357331379,3.07064315711112,0,0,0.5085370753095,1.62899880526114,6.04955043840887,7.184921922407,0,0,6.13396878427518,0.453248366080503,0,0,0.129282956361551,0,0,0,0,0.314408610199332,0.414239055347196,0.992332043623902,0,0,1.27668251554036,0,0,0,0.327872630709804,0,0,0.610131324509816,0,0,0,0.124192805882767,0.138348634936231,0.249960815924213,0.758245587708239,4.56744533671948,2.11739237728355,0,0.144921028610825,3.73137007217185,5.84283274618061,3.88364103051829,4.92447813715232,1.50940741051545,1.77962244319307,1.37304041038154,3.93200401784422,4.35224161631785,1.77426179987561,2.70804504178294,2.69881867298163,2.63947026689641,4.97647449409027,2.92425886013794,2.08698024724694,3.45592500693602,2.28483127301277,3.66183659884195,4.54621648006399,3.65195893944461,1.85613503951397,2.3885753321917,13.2009162338841,2.40376993627955,5.05124233148879,0,0,0,0,2.493765180635,0.463044948647668,0.244736704506468,0.358177682162975,0,0,1.23682402162117,0.38582807654183,0,0.256241518587947,0,0,0,0,0,0,0.982829546539238,1.47463745252232,0.422624246717254,0,0,0,0.567515953566836,1.47284760201473,0.139879507719444,0,0,0.431299245586727,0,0,0,0,0.867550349813015,0.558644917973244,2.22603045457393,0,0,8.8168985922671,4.2874366829448,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0.88332946650923,0.943757786781923,5.86971515269373,0.808679663052368,2.66967466827017,0,1.5913297769302,0.451261970095544,1.81534561833168,0,0,0.163771917510097,0,0,0,0,0,0,0.548257766857182,2.48105589194647,0,0.766574565837572,0,0,0,0,0.177404740325278,0,0.342976018874837,0,0,0,0.222462803784138,0.627944742804112,0,0,1.82631744101899,0.215927591218621,0.47775168788705,0.428859265059938,0,0,0.869291361512897,0.801711364730253,3.72989095493466,3.92652497316085,0.691259661814092,0.430227358820278,1.65664801022791,2.13033511897894,0.846774100381858,0.22910686854405,3.41227024230752,7.64431151181946,0,0,0,0.647428837187895,0.102662806856247,0,0.485710993059139,0,2.18845852677505,0,0,0,0,0.0771741581079447,1.5299169235277,0,0.735444965261716,0,0.196308467114945,0,0,1.69927114687817,0.281951753939561,0.515663103788617,0,0.892769693028288,1.05868461514708,0.481448200135009,0.730336388246517,0.917458566809082,0,3.62874593044325,0.0679914901909147,0.436350690340377,1.5870805215462,9.67187047233553,6.93263442947127,6.92202499398063,0,0,0,0,0,0,0,0.227336094654718,0,0,0.103432995861895,1.0661699095049,0.714193294391221,0.193766729508018,0,0.112131862580613,0.12729431655633,1.0105859447911,0.870866991587845,0.342233301085281,0.0673520530145875,0.0717222053926763,1.66330178273007,0.651226148887796,0,0,0.0898252021065869,2.34640942403454,0.611207220914332,4.06896178315738,1.33151354837103,1.20764276154616,0 | |||
|short_description=p@chr8:49831523..49831551,- | |||
}} |
Latest revision as of 18:45, 31 July 2015
Short description: | p@chr8:49831523..49831551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:49831523..49831551, - |
Coexpression cluster: | C4759_Placental_Amniotic_Mesenchymal_bone_Myoblast_Sebocyte_glioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.11e-14 | 76 |
preadipocyte | 5.59e-10 | 12 |
stromal cell | 4.35e-08 | 28 |
skin fibroblast | 4.65e-08 | 23 |
somatic stem cell | 1.34e-07 | 433 |
extraembryonic cell | 2.13e-07 | 19 |
multi fate stem cell | 4.48e-07 | 427 |
mesenchymal stem cell of adipose | 5.10e-07 | 8 |
stem cell | 7.75e-07 | 441 |
general ecto-epithelial cell | 8.12e-07 | 14 |
ecto-epithelial cell | 8.75e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.89e-12 | 99 |
integument | 9.41e-11 | 46 |
integumental system | 9.41e-11 | 46 |
skin of body | 2.46e-09 | 41 |
organ component layer | 2.86e-07 | 66 |
adipose tissue | 3.33e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.37e-09 | 14 |