FFCP PHASE1:Mm9::chr4:134708909..134708939,+: Difference between revisions
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{{FFCP|EntrezGene=12399|HGNC=|MCL_coexpression_id=698|UniProt=|association_with_transcript=56bp_to_ENSMUST00000156478_5end|description=CAGE_peak_3_at_Runx3_5end|id=chr4:134708909..134708939,+|ontology_enrichment_celltype=CL:0000988!9.08e-15!32;CL:0002032!9.08e-15!32;CL:0000037!9.08e-15!32;CL:0000566!9.08e-15!32;CL:0000837!9.08e-15!32;CL:0002031!6.25e-12!25;CL:0000049!1.04e-08!19;CL:0000838!2.43e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0000542!3.01e-07!13;CL:0000051!3.01e-07!13;CL:0000763!7.23e-07!16;CL:0002320!8.47e-07!46;CL:0000134!8.47e-07!46|ontology_enrichment_celltype_v019_2=CL:0000988,9.72e-22,32;CL:0002032,9.72e-22,32;CL:0000037,9.72e-22,32;CL:0000837,9.72e-22,32;CL:0002031,1.29e-15,25;CL:0000049,3.35e-14,19;CL:0002320,6.47e-13,46;CL:0000134,6.47e-13,46;CL:0000763,1.16e-10,16;CL:0000219,5.48e-10,54;CL:0000838,1.83e-09,12;CL:0000553,2.57e-09,6;CL:0000556,2.57e-09,6;CL:0000738,9.87e-09,17;CL:0002087,9.87e-09,17;CL:0000542,1.45e-08,13;CL:0000051,1.45e-08,13;CL:0000084,3.41e-08,11;CL:0000827,3.41e-08,11;CL:0000839,1.56e-07,13;CL:0000050,1.58e-07,9;CL:0000034,9.61e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.26e-17!48;UBERON:0002390!1.40e-15!45;UBERON:0003061!1.40e-15!45;UBERON:0002405!3.33e-11!70;UBERON:0004177!6.32e-11!29;UBERON:0003081!2.61e-09!88;UBERON:0003408!2.30e-08!24;UBERON:0006562!6.01e-08!24;UBERON:0001557!6.01e-08!24;UBERON:0001042!6.01e-08!24;UBERON:0008814!6.01e-08!24;UBERON:0009145!6.01e-08!24;UBERON:0002370!6.08e-08!23;UBERON:0000974!6.08e-08!23;UBERON:0004807!6.08e-08!23;UBERON:0005058!6.08e-08!23;UBERON:0003351!6.08e-08!23;UBERON:0009113!6.08e-08!23;UBERON:0003295!6.08e-08!23;UBERON:0009722!6.08e-08!23;UBERON:0005562!6.08e-08!23;UBERON:0007690!6.08e-08!23;UBERON:0002384!8.47e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.43e-21,48;UBERON:0002405,1.43e-21,48;UBERON:0002390,1.03e-18,45;UBERON:0003061,1.03e-18,45;UBERON:0002384,6.47e-13,46;UBERON:0004177,1.36e-10,29;UBERON:0005057,1.36e-10,29;UBERON:0003408,1.01e-09,24;UBERON:0003081,2.71e-09,87;UBERON:0002371,4.56e-09,16;UBERON:0002370,5.54e-09,23;UBERON:0000974,5.54e-09,23;UBERON:0004807,5.54e-09,23;UBERON:0005058,5.54e-09,23;UBERON:0003351,5.54e-09,23;UBERON:0009113,5.54e-09,23;UBERON:0003295,5.54e-09,23;UBERON:0009722,5.54e-09,23;UBERON:0005562,5.54e-09,23;UBERON:0007690,5.54e-09,23;UBERON:0002204,1.12e-08,32;UBERON:0000926,1.19e-08,120;UBERON:0004120,1.19e-08,120;UBERON:0006603,1.19e-08,120;UBERON:0006562,1.84e-08,24;UBERON:0001557,1.84e-08,24;UBERON:0001042,1.84e-08,24;UBERON:0008814,1.84e-08,24;UBERON:0009145,1.84e-08,24;UBERON:0001474,2.82e-08,22;UBERON:0004765,2.82e-08,22;UBERON:0001434,2.82e-08,22;UBERON:0000077,5.36e-08,35;UBERON:0000072,3.89e-07,27|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.985521055061667,2.57470978954193,0.856089841127525,0.8774937489487,11.641649635322,9.35398305883272,1.66554880907831,4.04950534779652,2.09868563438444,13.5648731104042,16.3166175990829,15.2780274647291,0.765389611359628,2.18440092641948,2.35079810225042,1.11994695955385,1.14704640533585,0,0,0,0,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0,0,0,2.92972141515835,3.906676722619,1.57057123192139,4.1176204162171,8.19654581950135,3.39857247121808,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,5.20126078778983,6.5282592781021,5.04140698713696,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,2.09720077362883,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,30.5546702703663,1.1875371125186,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,1.01219549843938,0.884610551949874,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,1.27728527604296,3.35482348616577,3.59941638596045,4.06624726633807,0,0,0,0,0,0,0,0,1.61729061793121,0.505445516867349,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,2.80885274925294,2.83082697826187,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0,0,0,0,2.03228509183265,0,0,0.169745085775188,0,0,0,0.390267295715598,0.630540576424764,0,0.637819074629948,0.983179888294428,1.20879487306127,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.989820737835213,1.3274513833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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12399 | |||
|HGNC= | |||
|MCL_coexpression_id=698 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=56bp_to_ENSMUST00000156478_5end | |||
|cluster_id=chr4:134708909..134708939,+ | |||
|description=CAGE_peak_3_at_Runx3_5end | |||
|id=chr4:134708909..134708939,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.08e-15!32;CL:0002032!9.08e-15!32;CL:0000037!9.08e-15!32;CL:0000566!9.08e-15!32;CL:0000837!9.08e-15!32;CL:0002031!6.25e-12!25;CL:0000049!1.04e-08!19;CL:0000838!2.43e-08!12;CL:0000084!1.25e-07!11;CL:0000827!1.25e-07!11;CL:0000738!2.00e-07!17;CL:0002087!2.00e-07!17;CL:0000542!3.01e-07!13;CL:0000051!3.01e-07!13;CL:0000763!7.23e-07!16;CL:0002320!8.47e-07!46;CL:0000134!8.47e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.72e-22,32;CL:0002032,9.72e-22,32;CL:0000037,9.72e-22,32;CL:0000837,9.72e-22,32;CL:0002031,1.29e-15,25;CL:0000049,3.35e-14,19;CL:0002320,6.47e-13,46;CL:0000134,6.47e-13,46;CL:0000763,1.16e-10,16;CL:0000219,5.48e-10,54;CL:0000838,1.83e-09,12;CL:0000553,2.57e-09,6;CL:0000556,2.57e-09,6;CL:0000738,9.87e-09,17;CL:0002087,9.87e-09,17;CL:0000542,1.45e-08,13;CL:0000051,1.45e-08,13;CL:0000084,3.41e-08,11;CL:0000827,3.41e-08,11;CL:0000839,1.56e-07,13;CL:0000050,1.58e-07,9;CL:0000034,9.61e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.26e-17!48;UBERON:0002390!1.40e-15!45;UBERON:0003061!1.40e-15!45;UBERON:0002405!3.33e-11!70;UBERON:0004177!6.32e-11!29;UBERON:0003081!2.61e-09!88;UBERON:0003408!2.30e-08!24;UBERON:0006562!6.01e-08!24;UBERON:0001557!6.01e-08!24;UBERON:0001042!6.01e-08!24;UBERON:0008814!6.01e-08!24;UBERON:0009145!6.01e-08!24;UBERON:0002370!6.08e-08!23;UBERON:0000974!6.08e-08!23;UBERON:0004807!6.08e-08!23;UBERON:0005058!6.08e-08!23;UBERON:0003351!6.08e-08!23;UBERON:0009113!6.08e-08!23;UBERON:0003295!6.08e-08!23;UBERON:0009722!6.08e-08!23;UBERON:0005562!6.08e-08!23;UBERON:0007690!6.08e-08!23;UBERON:0002384!8.47e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.43e-21,48;UBERON:0002405,1.43e-21,48;UBERON:0002390,1.03e-18,45;UBERON:0003061,1.03e-18,45;UBERON:0002384,6.47e-13,46;UBERON:0004177,1.36e-10,29;UBERON:0005057,1.36e-10,29;UBERON:0003408,1.01e-09,24;UBERON:0003081,2.71e-09,87;UBERON:0002371,4.56e-09,16;UBERON:0002370,5.54e-09,23;UBERON:0000974,5.54e-09,23;UBERON:0004807,5.54e-09,23;UBERON:0005058,5.54e-09,23;UBERON:0003351,5.54e-09,23;UBERON:0009113,5.54e-09,23;UBERON:0003295,5.54e-09,23;UBERON:0009722,5.54e-09,23;UBERON:0005562,5.54e-09,23;UBERON:0007690,5.54e-09,23;UBERON:0002204,1.12e-08,32;UBERON:0000926,1.19e-08,120;UBERON:0004120,1.19e-08,120;UBERON:0006603,1.19e-08,120;UBERON:0006562,1.84e-08,24;UBERON:0001557,1.84e-08,24;UBERON:0001042,1.84e-08,24;UBERON:0008814,1.84e-08,24;UBERON:0009145,1.84e-08,24;UBERON:0001474,2.82e-08,22;UBERON:0004765,2.82e-08,22;UBERON:0001434,2.82e-08,22;UBERON:0000077,5.36e-08,35;UBERON:0000072,3.89e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,4.77756296733832,0.985521055061667,2.57470978954193,0.856089841127525,0.8774937489487,11.641649635322,9.35398305883272,1.66554880907831,4.04950534779652,2.09868563438444,13.5648731104042,16.3166175990829,15.2780274647291,0.765389611359628,2.18440092641948,2.35079810225042,1.11994695955385,1.14704640533585,0,0,0,0,0,0.443461021310609,0.635030673459631,1.23012957516914,0,0,0,0,2.92972141515835,3.906676722619,1.57057123192139,4.1176204162171,8.19654581950135,3.39857247121808,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,5.20126078778983,6.5282592781021,5.04140698713696,0,0,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,2.09720077362883,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.11418387971906,30.5546702703663,1.1875371125186,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,1.01219549843938,0.884610551949874,0.323533699894818,1.98757366614354,1.93950101254089,0,0,0,1.27728527604296,3.35482348616577,3.59941638596045,4.06624726633807,0,0,0,0,0,0,0,0,1.61729061793121,0.505445516867349,0.420883711772948,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0,0,2.80885274925294,2.83082697826187,3.12579849335152,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0.0810688095458557,0.438599962275997,0,0.268412837520744,0,0,0.660837565967596,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0.166845105716094,0.786235980452812,0,0.405720242777006,0.241177159752417,0.50925170356284,0.287696137450811,0.972811360650212,0.274561413188081,0,0.744281895337007,0,0,0,0,2.03228509183265,0,0,0.169745085775188,0,0,0,0.390267295715598,0.630540576424764,0,0.637819074629948,0.983179888294428,1.20879487306127,0.578596234326046,0,0.54390568381871,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0.989820737835213,1.32745138339963,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0,0.661585194164886,1.15420377059036,0.161464426695906,0.180938774784468,0.238744688006273,0.164140899745061,0.291480836629851,0,8.37267315909478,0.82554747185289,0.925972636848558,0.941842285023455,6.69801715833023,4.80434163733698,3.0596117398894,4.19854356970974,4.42239916174156,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,1.24267862617385,7.89170114157866,0,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.2604087696879,0.629156066554265,0.724752362478018,1.72818003754719,2.21207784439725,0.202725215290164,0.821687657318618,1.29920822977795,0.358053391334963,2.18549490259391,2.16351809135944,2.06765338044408,1.51449674922221,2.13379058634,2.11734988787365,2.92373642219257,3.2712026157712,3.27255326108393,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,1.12609485270709,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.972426868273176,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0.135804113845862,1.68342681497322,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.385813221962283,0.249810577937946,0.467863216890817,1.07435527024149,0.191288332068843,0.661774257358546,0.695603506861264 | |||
|short_description=p3@Runx3 | |||
}} |
Latest revision as of 12:29, 26 September 2015
Short description: | p3@Runx3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Runx3_5end |
Coexpression cluster: | MCL_coexpression_mm9:698 |
Association with transcript: | 56bp_to_ENSMUST00000156478_5end |
EntrezGene: | Runx3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.72e-22 | 32 |
hematopoietic oligopotent progenitor cell | 9.72e-22 | 32 |
hematopoietic stem cell | 9.72e-22 | 32 |
hematopoietic multipotent progenitor cell | 9.72e-22 | 32 |
hematopoietic lineage restricted progenitor cell | 1.29e-15 | 25 |
common myeloid progenitor | 3.35e-14 | 19 |
connective tissue cell | 6.47e-13 | 46 |
mesenchymal cell | 6.47e-13 | 46 |
myeloid cell | 1.16e-10 | 16 |
motile cell | 5.48e-10 | 54 |
lymphoid lineage restricted progenitor cell | 1.83e-09 | 12 |
megakaryocyte progenitor cell | 2.57e-09 | 6 |
megakaryocyte | 2.57e-09 | 6 |
leukocyte | 9.87e-09 | 17 |
nongranular leukocyte | 9.87e-09 | 17 |
lymphocyte | 1.45e-08 | 13 |
common lymphoid progenitor | 1.45e-08 | 13 |
T cell | 3.41e-08 | 11 |
pro-T cell | 3.41e-08 | 11 |
myeloid lineage restricted progenitor cell | 1.56e-07 | 13 |
megakaryocyte-erythroid progenitor cell | 1.58e-07 | 9 |
stem cell | 9.61e-07 | 97 |