FFCP PHASE1:Hg19::chr8:104512831..104512852,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |||
|TSSclassifier=strong | |||
|UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | |||
|association_with_transcript=-123bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | |||
|cluster_id=chr8:104512831..104512852,+ | |||
|coexpression_cluster_id=C653 | |||
|description=CAGE_peak_5_at_RIMS2_5end | |||
|id=chr8:104512831..104512852,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;3.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.48e-14;82!UBERON:0006215;2.11e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;9.69e-10;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.06e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.59e-49!57;UBERON:0005068!7.59e-49!57;UBERON:0006241!7.59e-49!57;UBERON:0007135!7.59e-49!57;UBERON:0000073!4.65e-42!94;UBERON:0001016!4.65e-42!94;UBERON:0001017!6.66e-42!82;UBERON:0005743!6.98e-41!86;UBERON:0002616!1.33e-40!59;UBERON:0002780!4.47e-39!41;UBERON:0001890!4.47e-39!41;UBERON:0006240!4.47e-39!41;UBERON:0003080!7.46e-38!42;UBERON:0000955!2.34e-37!69;UBERON:0006238!2.34e-37!69;UBERON:0003075!1.42e-31!86;UBERON:0007284!1.42e-31!86;UBERON:0001869!1.59e-29!32;UBERON:0001893!1.90e-29!34;UBERON:0002346!2.09e-29!90;UBERON:0002020!2.28e-29!34;UBERON:0003528!2.28e-29!34;UBERON:0002791!4.11e-28!33;UBERON:0003056!1.49e-25!61;UBERON:0000956!3.85e-23!25;UBERON:0000203!3.85e-23!25;UBERON:0001950!1.12e-22!20;UBERON:0002619!1.40e-22!22;UBERON:0007023!1.62e-21!115;UBERON:0000033!1.74e-21!123;UBERON:0000153!2.28e-21!129;UBERON:0007811!2.28e-21!129;UBERON:0004121!4.74e-19!169;UBERON:0000924!3.66e-18!173;UBERON:0006601!3.66e-18!173;UBERON:0003076!7.94e-12!15;UBERON:0003057!7.94e-12!15;UBERON:0001894!1.99e-11!7;UBERON:0006222!1.99e-11!7;UBERON:0000025!2.15e-10!194;UBERON:0000200!9.20e-10!6;UBERON:0004733!4.52e-09!12;UBERON:0002028!4.52e-09!12;UBERON:0007277!4.52e-09!12;UBERON:0000475!2.25e-08!365;UBERON:0004732!3.39e-08!13;UBERON:0002021!5.74e-08!5;UBERON:0004111!6.06e-08!241;UBERON:0002680!6.75e-08!9;UBERON:0001895!6.75e-08!9;UBERON:0010092!6.75e-08!9;UBERON:0001872!7.75e-08!5;UBERON:0002308!1.12e-07!9;UBERON:0000125!1.12e-07!9;UBERON:0003296!1.29e-07!4;UBERON:0010133!1.29e-07!4;UBERON:0000483!2.18e-07!309;UBERON:0000119!3.82e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.38e-40;41!UBERON:0001890;1.38e-40;41!UBERON:0001869;8.35e-39;32!UBERON:0000073;2.85e-37;53!UBERON:0002616;2.85e-37;53!UBERON:0002791;2.74e-36;32!UBERON:0001893;1.36e-35;34!UBERON:0002619;1.83e-34;22!UBERON:0003528;2.82e-34;34!UBERON:0002020;2.82e-34;34!UBERON:0001950;1.73e-33;20!UBERON:0000956;5.06e-30;25!UBERON:0000203;5.06e-30;25!UBERON:0000955;3.43e-25;68!UBERON:0001017;1.92e-22;75!UBERON:0001016;1.34e-20;83!UBERON:0000200;2.29e-20;6!UBERON:0001894;1.07e-18;7!UBERON:0003296;1.16e-15;4!UBERON:0010133;1.16e-15;4!UBERON:0002784;5.45e-15;4!UBERON:0002420;1.04e-12;9!UBERON:0000125;1.04e-12;9!UBERON:0007245;1.04e-12;9!UBERON:0002308;1.04e-12;9!UBERON:0010009;1.04e-12;9!UBERON:0010011;1.04e-12;9!UBERON:0000454;1.04e-12;9!UBERON:0009663;1.07e-11;7!UBERON:0001870;1.46e-11;3!UBERON:0002021;3.17e-11;5!UBERON:0007023;1.22e-10;114!UBERON:0004733;2.06e-10;12!UBERON:0002028;2.06e-10;12!UBERON:0002680;3.30e-10;9!UBERON:0001895;3.30e-10;9!UBERON:0004732;1.49e-09;13!UBERON:0011216;4.31e-09;132!UBERON:0001905;1.09e-08;2!UBERON:0002757;1.09e-08;2!UBERON:0010134;1.09e-08;2!UBERON:0005408;1.09e-08;2!UBERON:0001899;1.09e-08;2!UBERON:0000007;1.13e-08;2!UBERON:0002702;3.23e-08;2!UBERON:0000369;4.00e-08;4!UBERON:0002435;4.00e-08;4!UBERON:0000204;4.00e-08;4!UBERON:0001897;5.29e-08;2!UBERON:0010225;5.29e-08;2!UBERON:0001871;8.54e-08;6!UBERON:0002771;8.92e-08;2!UBERON:0001875;1.74e-07;2!UBERON:0006514;1.74e-07;2!UBERON:0000013;3.58e-07;5!UBERON:0002410;3.58e-07;5!UBERON:0001872;7.89e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.01e-67,53;UBERON:0002616,4.01e-67,53;UBERON:0001049,3.99e-63,56;UBERON:0005068,3.99e-63,56;UBERON:0006241,3.99e-63,56;UBERON:0007135,3.99e-63,56;UBERON:0002780,2.82e-58,41;UBERON:0001890,2.82e-58,41;UBERON:0003080,2.82e-58,41;UBERON:0006240,2.82e-58,41;UBERON:0001016,9.37e-58,89;UBERON:0000955,2.01e-56,68;UBERON:0006238,2.01e-56,68;UBERON:0001017,5.55e-55,81;UBERON:0003075,5.22e-46,82;UBERON:0007284,5.22e-46,82;UBERON:0001869,6.75e-45,32;UBERON:0002346,1.80e-43,86;UBERON:0003056,5.08e-43,61;UBERON:0001893,5.34e-42,34;UBERON:0003528,8.86e-42,34;UBERON:0002020,8.86e-42,34;UBERON:0002791,1.37e-40,32;UBERON:0010371,1.39e-36,104;UBERON:0002619,7.53e-35,22;UBERON:0001950,7.24e-34,20;UBERON:0007023,5.78e-33,114;UBERON:0000956,2.32e-30,25;UBERON:0000203,2.32e-30,25;UBERON:0004121,9.53e-29,171;UBERON:0000924,9.53e-29,171;UBERON:0006601,9.53e-29,171;UBERON:0010314,5.64e-27,132;UBERON:0011216,3.03e-22,223;UBERON:0000200,1.03e-20,6;UBERON:0001894,9.69e-19,7;UBERON:0006222,9.69e-19,7;UBERON:0003296,1.05e-15,4;UBERON:0010133,1.05e-15,4;UBERON:0002784,5.10e-15,4;UBERON:0000025,8.21e-15,192;UBERON:0002420,9.23e-13,9;UBERON:0007245,9.23e-13,9;UBERON:0010009,9.23e-13,9;UBERON:0010011,9.23e-13,9;UBERON:0000454,9.23e-13,9;UBERON:0000125,1.01e-12,9;UBERON:0002308,1.01e-12,9;UBERON:0009663,1.01e-11,7;UBERON:0001870,1.39e-11,3;UBERON:0002021,2.26e-11,5;UBERON:0004111,6.04e-11,240;UBERON:0004733,2.27e-10,12;UBERON:0002028,2.27e-10,12;UBERON:0007277,2.27e-10,12;UBERON:0002680,3.34e-10,9;UBERON:0001895,3.34e-10,9;UBERON:0010092,3.34e-10,9;UBERON:0004732,1.62e-09,13;UBERON:0000483,2.03e-09,306;UBERON:0000119,3.09e-09,309;UBERON:0001905,1.03e-08,2;UBERON:0002757,1.03e-08,2;UBERON:0010134,1.03e-08,2;UBERON:0005408,1.03e-08,2;UBERON:0001899,1.03e-08,2;UBERON:0000007,1.07e-08,2;UBERON:0002702,2.75e-08,2;UBERON:0000369,3.68e-08,4;UBERON:0002435,3.68e-08,4;UBERON:0000204,3.68e-08,4;UBERON:0010082,3.68e-08,4;UBERON:0003076,3.78e-08,15;UBERON:0003057,3.78e-08,15;UBERON:0001897,5.21e-08,2;UBERON:0010225,5.21e-08,2;UBERON:0002771,7.65e-08,2;UBERON:0001871,8.03e-08,6;UBERON:0001875,1.80e-07,2;UBERON:0006514,1.80e-07,2;UBERON:0000013,3.51e-07,5;UBERON:0002410,3.51e-07,5;UBERON:0001872,6.01e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.358779271377724,0,0,0,0.103052529238439,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0.710019185033229,0,0,0,0,0,0.853815942907168,0.662648841607426,0.348581828608555,0.621966330092223,0.252320850875628,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.330037999682352,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54736358051564,0,0,0,0.19924798825107,0,2.01546198283421,0,0,0,0,0,0,0,0,0,0,2.04089815956073,0,0,0,0,0,0,0,1.03423011972439,0.291604613383254,2.43074992906609,0,2.29133233388275,18.30980835805,15.5916756503027,8.57088094965288,2.4132393686937,0,0.278847488557207,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.0884575645033392,0,0,0,0,0.67401132980677,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0,1.65355761355942,0,0,0.330991955875499,0.313932918407225,1.19472429772959,0.569219092059585,0,0,0,0.174118413160805,0,0,0,0,0,0,0.176512253383001,1.12990370390266,0.137041924646751,0,3.10222900183806,0.195551382734803,0,0,0,0,0.114536596165916,7.37858490806448,0,0.124252535565433,0.235694034616795,0,0,0,0,1.80126086612937,1.09524303113594,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,0,0,0,0,0,0,1.49823746722733,0.964518890790115,1.65047323916681,1.24632101408756,0,0,2.85522916292716,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.92562821219883,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,2.65820453990096,2.19647276823534,3.3801551290755,0,1.22021956690538,0.745156835296601,0.830091809617385,0,0,0,0,0.936669811613763,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7973596699725,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0.139879507719444,0,3.4531480251986,3.88169321028054,0,3.1670795075684,0,0,0,0,0,0,4.00285374142735,0,0,1.73418907760441,1.41696576325585,3.35231104020018,1.8460472781668,0.504143392443436,2.42050383624763,1.61475645631851,0,0,0.353909170043221,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,2.63396580011739,0.781078098613847,3.9270491335225,2.40980078736846,0.546974809018219,0,0,0,0,5.89272019466115,7.73452561103295,4.85572483389305,11.3831095675649,0,0.345701962667338,0,4.21412344456357,1.84163765975977,0.236387681767936,0,0.235479278551542,1.25692471932802,0,0,0,0,1.21510125100316,2.21219056425817,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0.33883824611688,0.989464650708862,5.73658805553359,0.308696632431779,0.218559560503957,5.17349025997675,0,1.88541237681301,0.196308467114945,0.297046400327086,0.8453114551668,0,0,0,0,0.178553938605658,0,0,0,0,0,0,1.22384682343646,0.436350690340377,0.5290268405154,0,0,0,0,0.218531143927391,0.126698501011437,0.305966489225945,1.06886962106224,0.275684698604535,0.250707539292375,0.378893491091197,0,4.1458471972939,1.44806194206653,0,0,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0,0,0,0.143444410785353,0,1.05824249194267,0.426909383510862,0,0,0,0,0,0,0,0 | |||
|short_description=p5@RIMS2 | |||
}} |
Latest revision as of 00:46, 25 September 2015
Short description: | p5@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RIMS2_5end |
Coexpression cluster: | C653_cerebellum_pituitary_pineal_nonsmall_somatostatinoma_occipital_small |
Association with transcript: | -123bp_to_ENST00000504942, NM_001100117, uc003ylp.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E9PFB6B3KX91F8WD47Q9UQ26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.06e-10 | 6 |