FFCP PHASE1:Mm9::chr10:34203323..34203339,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:34203323..34203339,+
|short_description=p2@Frk
|description=CAGE_peak_2_at_Frk_5end
|association_with_transcript=117bp_to_ENSMUST00000019913,ENSMUST000001...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14302 | |EntrezGene=14302 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q922K9,Q8BPC1 | |UniProt=Q922K9,Q8BPC1 | ||
|association_with_transcript=117bp_to_ENSMUST00000019913,ENSMUST00000170771,NM_001159544,NM_010237,uc007euy.2,uc007euz.2,uc007eva.2,uc007evb.2_5end | |||
|cluster_id=chr10:34203323..34203339,+ | |||
|description=CAGE_peak_2_at_Frk_5end | |||
|id=chr10:34203323..34203339,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.90e-07!25;CL:0002563!2.90e-07!9;CL:0002251!2.90e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-11,25;CL:0002563,1.38e-10,9;CL:0002251,1.38e-10,9;CL:0002076,6.17e-09,15;CL:0000223,9.17e-09,20;CL:0000075,2.40e-08,7;CL:0000239,4.45e-08,6;CL:0000677,4.45e-08,6;CL:0000584,4.45e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.67e-20!59;UBERON:0000160!3.42e-20!43;UBERON:0004119!6.65e-15!130;UBERON:0000925!6.65e-15!130;UBERON:0006595!6.65e-15!130;UBERON:0001007!3.35e-14!128;UBERON:0001555!3.35e-14!128;UBERON:0007026!3.35e-14!128;UBERON:0004921!3.96e-13!126;UBERON:0004185!3.96e-13!126;UBERON:0000344!2.25e-11!15;UBERON:0001242!4.85e-10!13;UBERON:0000060!4.85e-10!13;UBERON:0001262!4.85e-10!13;UBERON:0004786!4.85e-10!13;UBERON:0000481!6.08e-08!230;UBERON:0001008!6.24e-08!17;UBERON:0004923!1.44e-07!24;UBERON:0006554!1.51e-07!16;UBERON:0000485!2.83e-07!11;UBERON:0003350!2.90e-07!9;UBERON:0004808!2.90e-07!9;UBERON:0001277!2.90e-07!9;UBERON:0002100!9.57e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.40e-28,31;UBERON:0005409,7.71e-28,47;UBERON:0000344,4.43e-17,15;UBERON:0001242,5.71e-15,13;UBERON:0001262,5.71e-15,13;UBERON:0004786,5.71e-15,13;UBERON:0004119,1.60e-14,118;UBERON:0000925,1.60e-14,118;UBERON:0006595,1.60e-14,118;UBERON:0001007,1.27e-13,116;UBERON:0001555,1.27e-13,116;UBERON:0007026,1.27e-13,116;UBERON:0004921,2.92e-12,114;UBERON:0001008,1.96e-11,19;UBERON:0004923,7.82e-11,24;UBERON:0006554,7.88e-11,18;UBERON:0003350,1.38e-10,9;UBERON:0004808,1.38e-10,9;UBERON:0001277,1.38e-10,9;UBERON:0000485,1.34e-09,11;UBERON:0002113,2.89e-08,14;UBERON:0003918,2.89e-08,14;UBERON:0011143,2.89e-08,14;UBERON:0005095,2.89e-08,14;UBERON:0007687,2.89e-08,14 | |||
|phase1_expression=0.640595388419176,26.8711063882308,20.9299650119187,24.8020653271601,26.0465779572101,18.1309613664841,19.6234618100242,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.44573593256819,0,0,16.4792195477209,20.6468352960453,18.3754228516806,27.1380057580217,33.8289835316846,23.7529274320467,12.3494763582366,26.6076612786366,0,0,0,6.06588401477677,6.98185510505668,7.14592746918292,0,0,0,0,0,0,0.755380907853464,0.811015449756117,1.10128051297009,0,0,0,0,0,0,0,0,0,1.80081605225163,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.226714680320357,1.73918693221007,0.860423876981386,1.3599426674155,0.539703191637817,0,1.34408066129201,1.68533304158102,0.511290967734173,0.259786004602869,0.35333957451034,1.40843419776681,0,0,0,1.08245520505607,4.05375784760158,2.52762222507392,5.1382745873577,0.258937883647172,0.742210695324124,0.867426633830679,0.608930956624282,0.461230994512117,0.904335843315735,0.940709657085638,0.753999547978053,0.988779870937496,0.144599356919912,0,0,0,0,9.31958806090611,0,0,17.3710797541842,0,0,0,0,0,0,0,0.255715457330331,0,0,1.01839363850316,2.36373244159177,9.09801930361229,0.420883711772948,0.650602214813519,0,0.540186389416048,0.30140963567143,0.204109497453984,0.2562274405697,0,0.776110112217047,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0,0.590292695242212,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,37.0069036941854,10.3135720998782,1.2797295032114,0.928946687441754,1.9330119198314,3.83198696784351,2.44615848229357,4.56541502670142,14.7104009078799,3.45867804920423,3.2673577144035,4.57599885694647,5.26403035221624,12.5834717211591,18.1555961894743,13.1433240347882,0.948339504765408,1.14248512609729,2.25415471346161,2.8511185898344,1.55161989734101,2.17421041659988,3.09859031908861,2.21415221969403,3.1399745568275,1.85095745882701,1.48226313543574,0,0.196558995113203,0,0,0.964708639009667,0.25462585178142,0.575392274901621,0,0.274561413188081,1.43768206527355,1.11642284300551,1.24815069245824,0,0.717589654087649,1.4473305640901,0.739012760666419,0.37898282354097,0.814824882210129,0.509235257325564,0.234690248288502,1.34005005953453,0.714130922658041,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,2.45882136509518,0.551873492609465,0,0,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,1.70328102249922,0.890328018336276,0.651547837414304,7.4236555337641,2.65490276679926,0.971122544619926,1.81394134178851,2.07465587731488,0,1.53717573971964,1.80899805217755,0.727067458955011,1.06949213515416,2.84433082142234,0,4.12542172992747,1.70219802876894,0.540183282093931,0,0.857348140126369,0.532020700926821,0.356737635204141,0.658196082408484,0.304464949114599,2.58138878870081,1.0591603543191,10.1443063105282,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,8.45294426226567,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,2.86401185404534,0.316335993581135,2.64315307264903,3.67218158794124,3.3454127362315,2.18362563746178,1.88810084938749,3.38879168473877,3.66458318777641,17.8868663142674,0.621339313086926,0,1.19613236835183,1.48912641411388,0.388902376688095,1.03327858782185,1.01373675294467,1.05621514781179,0.781226309063701,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,3.47741269257943,0.750729901804728,9.52388446189778,2.35805216986972,8.02515366456581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.655490552289177,0.768301828858431,0.804096565378586,0,0.347652977834566,0.77163688185482,0,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.376437521661322,0.507687647350059,0.365855945745545,0,1.08643291076689,0.561142271657738,0.237270036248348,0.591026894253381,0,0.154936841185966,0.964533054905707,0,0.701794825336225,0.429742108096597,0.382576664137687,0,0 | |phase1_expression=0.640595388419176,26.8711063882308,20.9299650119187,24.8020653271601,26.0465779572101,18.1309613664841,19.6234618100242,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.44573593256819,0,0,16.4792195477209,20.6468352960453,18.3754228516806,27.1380057580217,33.8289835316846,23.7529274320467,12.3494763582366,26.6076612786366,0,0,0,6.06588401477677,6.98185510505668,7.14592746918292,0,0,0,0,0,0,0.755380907853464,0.811015449756117,1.10128051297009,0,0,0,0,0,0,0,0,0,1.80081605225163,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.226714680320357,1.73918693221007,0.860423876981386,1.3599426674155,0.539703191637817,0,1.34408066129201,1.68533304158102,0.511290967734173,0.259786004602869,0.35333957451034,1.40843419776681,0,0,0,1.08245520505607,4.05375784760158,2.52762222507392,5.1382745873577,0.258937883647172,0.742210695324124,0.867426633830679,0.608930956624282,0.461230994512117,0.904335843315735,0.940709657085638,0.753999547978053,0.988779870937496,0.144599356919912,0,0,0,0,9.31958806090611,0,0,17.3710797541842,0,0,0,0,0,0,0,0.255715457330331,0,0,1.01839363850316,2.36373244159177,9.09801930361229,0.420883711772948,0.650602214813519,0,0.540186389416048,0.30140963567143,0.204109497453984,0.2562274405697,0,0.776110112217047,0.215567992932842,0,0.175951124163949,0,0.556094498451196,0.348252166522167,0,0.796137067273973,0,0,0,0.828503090142008,0.469052119962192,0.36012412292203,0,0.590292695242212,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0.492502392237286,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,37.0069036941854,10.3135720998782,1.2797295032114,0.928946687441754,1.9330119198314,3.83198696784351,2.44615848229357,4.56541502670142,14.7104009078799,3.45867804920423,3.2673577144035,4.57599885694647,5.26403035221624,12.5834717211591,18.1555961894743,13.1433240347882,0.948339504765408,1.14248512609729,2.25415471346161,2.8511185898344,1.55161989734101,2.17421041659988,3.09859031908861,2.21415221969403,3.1399745568275,1.85095745882701,1.48226313543574,0,0.196558995113203,0,0,0.964708639009667,0.25462585178142,0.575392274901621,0,0.274561413188081,1.43768206527355,1.11642284300551,1.24815069245824,0,0.717589654087649,1.4473305640901,0.739012760666419,0.37898282354097,0.814824882210129,0.509235257325564,0.234690248288502,1.34005005953453,0.714130922658041,0.585400943573396,0.315270288212382,0.44292937929755,0.478364305972461,0.491589944147214,0.518054945597687,0.433947175744535,0,0,2.45882136509518,0.551873492609465,0,0,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,1.70328102249922,0.890328018336276,0.651547837414304,7.4236555337641,2.65490276679926,0.971122544619926,1.81394134178851,2.07465587731488,0,1.53717573971964,1.80899805217755,0.727067458955011,1.06949213515416,2.84433082142234,0,4.12542172992747,1.70219802876894,0.540183282093931,0,0.857348140126369,0.532020700926821,0.356737635204141,0.658196082408484,0.304464949114599,2.58138878870081,1.0591603543191,10.1443063105282,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,8.45294426226567,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,2.86401185404534,0.316335993581135,2.64315307264903,3.67218158794124,3.3454127362315,2.18362563746178,1.88810084938749,3.38879168473877,3.66458318777641,17.8868663142674,0.621339313086926,0,1.19613236835183,1.48912641411388,0.388902376688095,1.03327858782185,1.01373675294467,1.05621514781179,0.781226309063701,0.209718688851422,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.680191150845634,0,0,0,3.47741269257943,0.750729901804728,9.52388446189778,2.35805216986972,8.02515366456581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0.754505365544305,0.655490552289177,0.768301828858431,0.804096565378586,0,0.347652977834566,0.77163688185482,0,0.735994600671987,0.685738504770831,0.70990322463735,0.476872379894642,0.726732083161643,0.376437521661322,0.507687647350059,0.365855945745545,0,1.08643291076689,0.561142271657738,0.237270036248348,0.591026894253381,0,0.154936841185966,0.964533054905707,0,0.701794825336225,0.429742108096597,0.382576664137687,0,0 | ||
|short_description=p2@Frk | |||
}} | }} |
Latest revision as of 23:25, 25 September 2015
Short description: | p2@Frk |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Frk_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 117bp_to_ENSMUST00000019913, ENSMUST00000170771, NM_001159544, NM_010237, uc007euy.2, uc007euz.2, uc007eva.2, uc007evb.2_5end |
EntrezGene: | Frk |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-11 | 25 |
intestinal epithelial cell | 1.38e-10 | 9 |
epithelial cell of alimentary canal | 1.38e-10 | 9 |
endo-epithelial cell | 6.17e-09 | 15 |
endodermal cell | 9.17e-09 | 20 |
columnar/cuboidal epithelial cell | 2.40e-08 | 7 |
brush border epithelial cell | 4.45e-08 | 6 |
gut absorptive cell | 4.45e-08 | 6 |
enterocyte | 4.45e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.40e-28 | 31 |
gastrointestinal system | 7.71e-28 | 47 |
mucosa | 4.43e-17 | 15 |
intestinal mucosa | 5.71e-15 | 13 |
wall of intestine | 5.71e-15 | 13 |
gastrointestinal system mucosa | 5.71e-15 | 13 |
endoderm-derived structure | 1.60e-14 | 118 |
endoderm | 1.60e-14 | 118 |
presumptive endoderm | 1.60e-14 | 118 |
digestive system | 1.27e-13 | 116 |
digestive tract | 1.27e-13 | 116 |
primitive gut | 1.27e-13 | 116 |
subdivision of digestive tract | 2.92e-12 | 114 |
renal system | 1.96e-11 | 19 |
organ component layer | 7.82e-11 | 24 |
urinary system structure | 7.88e-11 | 18 |
epithelium of mucosa | 1.38e-10 | 9 |
gastrointestinal system epithelium | 1.38e-10 | 9 |
intestinal epithelium | 1.38e-10 | 9 |
simple columnar epithelium | 1.34e-09 | 11 |
kidney | 2.89e-08 | 14 |
kidney mesenchyme | 2.89e-08 | 14 |
upper urinary tract | 2.89e-08 | 14 |
kidney rudiment | 2.89e-08 | 14 |
kidney field | 2.89e-08 | 14 |