FFCP PHASE1:Mm9::chr2:91077082..91077122,-: Difference between revisions
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{{FFCP|EntrezGene=107986|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=0bp_to_ENSMUST00000135927_5end|description=CAGE_peak_1_at_Ddb2_5end|id=chr2:91077082..91077122,-|ontology_enrichment_celltype=CL:0000542!1.89e-08!13;CL:0000051!1.89e-08!13;CL:0000838!3.39e-08!12;CL:0000084!1.22e-07!11;CL:0000827!1.22e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,1.87e-08,13;CL:0000051,1.87e-08,13;CL:0000838,3.35e-08,12;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.03e-20!130;UBERON:0000925!2.03e-20!130;UBERON:0006595!2.03e-20!130;UBERON:0001007!4.87e-20!128;UBERON:0001555!4.87e-20!128;UBERON:0007026!4.87e-20!128;UBERON:0004921!7.36e-20!126;UBERON:0004185!7.36e-20!126;UBERON:0000077!1.22e-14!97;UBERON:0001041!8.17e-14!92;UBERON:0001004!8.01e-10!42;UBERON:0004177!1.80e-09!29;UBERON:0000065!1.82e-09!41;UBERON:0005911!2.51e-09!69;UBERON:0003104!2.82e-09!131;UBERON:0009142!2.82e-09!131;UBERON:0003408!3.55e-09!24;UBERON:0002370!8.18e-09!23;UBERON:0000974!8.18e-09!23;UBERON:0004807!8.18e-09!23;UBERON:0005058!8.18e-09!23;UBERON:0003351!8.18e-09!23;UBERON:0009113!8.18e-09!23;UBERON:0003295!8.18e-09!23;UBERON:0009722!8.18e-09!23;UBERON:0005562!8.18e-09!23;UBERON:0007690!8.18e-09!23;UBERON:0005409!8.38e-09!59;UBERON:0006562!3.61e-08!24;UBERON:0001557!3.61e-08!24;UBERON:0001042!3.61e-08!24;UBERON:0008814!3.61e-08!24;UBERON:0009145!3.61e-08!24;UBERON:0000072!5.94e-08!27;UBERON:0005057!6.30e-08!51;UBERON:0000926!1.03e-07!193;UBERON:0004120!1.03e-07!193;UBERON:0006603!1.03e-07!193;UBERON:0003929!1.96e-07!55;UBERON:0000464!2.25e-07!57;UBERON:0000466!2.63e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.79e-18,118;UBERON:0000925,1.79e-18,118;UBERON:0006595,1.79e-18,118;UBERON:0001007,4.00e-18,116;UBERON:0001555,4.00e-18,116;UBERON:0007026,4.00e-18,116;UBERON:0004921,5.71e-18,114;UBERON:0001041,2.33e-12,80;UBERON:0001004,6.32e-10,42;UBERON:0000077,7.79e-10,35;UBERON:0004177,1.37e-09,29;UBERON:0005057,1.37e-09,29;UBERON:0000065,1.44e-09,41;UBERON:0005911,2.05e-09,69;UBERON:0003408,2.66e-09,24;UBERON:0002370,6.13e-09,23;UBERON:0000974,6.13e-09,23;UBERON:0004807,6.13e-09,23;UBERON:0005058,6.13e-09,23;UBERON:0003351,6.13e-09,23;UBERON:0009113,6.13e-09,23;UBERON:0003295,6.13e-09,23;UBERON:0009722,6.13e-09,23;UBERON:0005562,6.13e-09,23;UBERON:0007690,6.13e-09,23;UBERON:0006562,2.76e-08,24;UBERON:0001557,2.76e-08,24;UBERON:0001042,2.76e-08,24;UBERON:0008814,2.76e-08,24;UBERON:0009145,2.76e-08,24;UBERON:0000072,4.61e-08,27;UBERON:0000153,8.49e-08,43;UBERON:0005409,1.40e-07,47;UBERON:0003929,1.62e-07,55|phase1_expression=3.52327463630547,0.348975407639361,1.81999695755814,6.65421264875026,3.00537437967808,5.54001597309236,9.1108929832255,44.0310532935775,19.1472662126267,30.8965174745031,9.93064215707929,9.33334260245436,42.9713832127326,54.4629107070354,7.32841475994458,10.1237633694913,9.09430441566591,15.1421839371954,20.1558217400436,19.9463136345074,7.56885282344521,17.6737893137576,15.4107875591972,6.39969691173627,5.73523202667925,2.8711598205751,3.01533397311352,4.30942465371778,8.17100703662408,7.05684363327806,6.43018480900384,4.44521471421742,2.46025915033828,15.8481681015439,22.2415747208481,21.7767385419625,23.4794759701724,2.09265815368454,7.813353445238,3.66466620781659,4.70585190424811,6.14740936462601,3.88408282424923,1.1330713617802,1.4192770370732,1.65192076945513,0.782391344348039,0,0.219686182734472,0.777719596297134,1.39986421625363,0,20.4694779390438,39.8949178106239,31.2567233202492,0.514518872071894,0.573066879877513,0,1.61853168687678,1.5869729378161,0.633831403506179,0.338844532069132,0,1.3498495759221,0.988866362566974,0,0.599200221036809,0.384218305321555,1.24427534770173,1.35005938331691,1.68259969081106,1.99955689082663,2.20868540951614,0.489963196859816,0.862609239164127,0,6.60695285996332,3.95830748064082,3.37934373163736,0.923204014111357,1.18933936683133,1.56274011167028,1.95428099300967,4.50210088025344,2.13917546887534,2.35702868378934,2.70506193518296,0.931997229126503,0.227178579999552,0.302286240427142,4.92769630792852,4.30211938490693,1.3599426674155,1.07940638327563,2.59910566979068,7.6164570806547,4.21333260395256,0.511290967734173,0.779358013808606,1.06001872353102,3.66192891419369,1.28326477414318,0,0,7.14420435337007,5.32055717497707,5.56076889516262,6.2801133845483,20.1971549244794,2.52351636410202,2.60227990149204,4.26251669636998,2.30615497256059,3.01445281105245,4.46837087115678,1.75933227861546,9.88779870937496,3.03658649531814,4.42305275974937,2.91180329905337,3.75430581382669,6.78825354389311,3.72783522436244,2.63502717310392,3.56059401582874,7.91916871146633,4.55297473122497,2.39961092397363,2.41433431438823,2.99581278809645,1.83000241127451,0.879580464790051,2.08589184230732,4.34716277461562,3.32460871295296,1.94689515681309,5.19380755636613,7.58882520721567,13.1415834385511,13.2578369208479,4.42409506073193,1.83921683546778,2.52086981727489,4.370439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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=107986 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000135927_5end | |||
|cluster_id=chr2:91077082..91077122,- | |||
|description=CAGE_peak_1_at_Ddb2_5end | |||
|id=chr2:91077082..91077122,- | |||
|ontology_enrichment_celltype=CL:0000542!1.89e-08!13;CL:0000051!1.89e-08!13;CL:0000838!3.39e-08!12;CL:0000084!1.22e-07!11;CL:0000827!1.22e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.87e-08,13;CL:0000051,1.87e-08,13;CL:0000838,3.35e-08,12;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.03e-20!130;UBERON:0000925!2.03e-20!130;UBERON:0006595!2.03e-20!130;UBERON:0001007!4.87e-20!128;UBERON:0001555!4.87e-20!128;UBERON:0007026!4.87e-20!128;UBERON:0004921!7.36e-20!126;UBERON:0004185!7.36e-20!126;UBERON:0000077!1.22e-14!97;UBERON:0001041!8.17e-14!92;UBERON:0001004!8.01e-10!42;UBERON:0004177!1.80e-09!29;UBERON:0000065!1.82e-09!41;UBERON:0005911!2.51e-09!69;UBERON:0003104!2.82e-09!131;UBERON:0009142!2.82e-09!131;UBERON:0003408!3.55e-09!24;UBERON:0002370!8.18e-09!23;UBERON:0000974!8.18e-09!23;UBERON:0004807!8.18e-09!23;UBERON:0005058!8.18e-09!23;UBERON:0003351!8.18e-09!23;UBERON:0009113!8.18e-09!23;UBERON:0003295!8.18e-09!23;UBERON:0009722!8.18e-09!23;UBERON:0005562!8.18e-09!23;UBERON:0007690!8.18e-09!23;UBERON:0005409!8.38e-09!59;UBERON:0006562!3.61e-08!24;UBERON:0001557!3.61e-08!24;UBERON:0001042!3.61e-08!24;UBERON:0008814!3.61e-08!24;UBERON:0009145!3.61e-08!24;UBERON:0000072!5.94e-08!27;UBERON:0005057!6.30e-08!51;UBERON:0000926!1.03e-07!193;UBERON:0004120!1.03e-07!193;UBERON:0006603!1.03e-07!193;UBERON:0003929!1.96e-07!55;UBERON:0000464!2.25e-07!57;UBERON:0000466!2.63e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.79e-18,118;UBERON:0000925,1.79e-18,118;UBERON:0006595,1.79e-18,118;UBERON:0001007,4.00e-18,116;UBERON:0001555,4.00e-18,116;UBERON:0007026,4.00e-18,116;UBERON:0004921,5.71e-18,114;UBERON:0001041,2.33e-12,80;UBERON:0001004,6.32e-10,42;UBERON:0000077,7.79e-10,35;UBERON:0004177,1.37e-09,29;UBERON:0005057,1.37e-09,29;UBERON:0000065,1.44e-09,41;UBERON:0005911,2.05e-09,69;UBERON:0003408,2.66e-09,24;UBERON:0002370,6.13e-09,23;UBERON:0000974,6.13e-09,23;UBERON:0004807,6.13e-09,23;UBERON:0005058,6.13e-09,23;UBERON:0003351,6.13e-09,23;UBERON:0009113,6.13e-09,23;UBERON:0003295,6.13e-09,23;UBERON:0009722,6.13e-09,23;UBERON:0005562,6.13e-09,23;UBERON:0007690,6.13e-09,23;UBERON:0006562,2.76e-08,24;UBERON:0001557,2.76e-08,24;UBERON:0001042,2.76e-08,24;UBERON:0008814,2.76e-08,24;UBERON:0009145,2.76e-08,24;UBERON:0000072,4.61e-08,27;UBERON:0000153,8.49e-08,43;UBERON:0005409,1.40e-07,47;UBERON:0003929,1.62e-07,55 | |||
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| |||
|short_description=p1@Ddb2 | |||
}} |
Latest revision as of 02:54, 27 September 2015
Short description: | p1@Ddb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ddb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000135927_5end |
EntrezGene: | Ddb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.87e-08 | 13 |
common lymphoid progenitor | 1.87e-08 | 13 |
lymphoid lineage restricted progenitor cell | 3.35e-08 | 12 |
T cell | 1.21e-07 | 11 |
pro-T cell | 1.21e-07 | 11 |