FFCP PHASE1:Mm9::chr2:91035254..91035271,-: Difference between revisions
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{{FFCP|EntrezGene=22259|HGNC=|MCL_coexpression_id=175|UniProt=|association_with_transcript=0bp_to_uc008kvd.2_5end|description=CAGE_peak_3_at_Nr1h3_5end|id=chr2:91035254..91035271,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-08,25;CL:0002563,1.60e-07,9;CL:0002251,1.60e-07,9;CL:0000239,2.96e-07,6;CL:0000677,2.96e-07,6;CL:0000584,2.96e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.55e-12!22;UBERON:0007499!1.55e-12!22;UBERON:0006925!1.55e-12!22;UBERON:0009497!1.55e-12!22;UBERON:0000015!1.55e-12!22;UBERON:0002423!1.55e-12!22;UBERON:0006235!1.55e-12!22;UBERON:0008835!1.55e-12!22;UBERON:0003894!1.55e-12!22;UBERON:0004161!1.55e-12!22;UBERON:0008836!1.55e-12!22;UBERON:0009854!2.03e-11!23;UBERON:0009856!2.03e-11!23;UBERON:0002365!8.88e-11!25;UBERON:0002330!8.88e-11!25;UBERON:0000344!5.21e-09!15;UBERON:0000160!8.17e-09!43;UBERON:0004119!2.02e-08!130;UBERON:0000925!2.02e-08!130;UBERON:0006595!2.02e-08!130;UBERON:0001007!2.27e-08!128;UBERON:0001555!2.27e-08!128;UBERON:0007026!2.27e-08!128;UBERON:0005172!2.28e-08!49;UBERON:0005173!2.28e-08!49;UBERON:0002417!2.28e-08!49;UBERON:0000916!2.28e-08!49;UBERON:0001242!5.72e-08!13;UBERON:0000060!5.72e-08!13;UBERON:0001262!5.72e-08!13;UBERON:0004786!5.72e-08!13;UBERON:0004921!1.16e-07!126;UBERON:0004185!1.16e-07!126;UBERON:0005409!2.41e-07!59;UBERON:0004923!3.01e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.38e-21,31;UBERON:0002107,2.17e-17,22;UBERON:0007499,2.17e-17,22;UBERON:0006925,2.17e-17,22;UBERON:0009497,2.17e-17,22;UBERON:0000015,2.17e-17,22;UBERON:0002423,2.17e-17,22;UBERON:0006235,2.17e-17,22;UBERON:0008835,2.17e-17,22;UBERON:0003894,2.17e-17,22;UBERON:0004161,2.17e-17,22;UBERON:0008836,2.17e-17,22;UBERON:0009854,2.41e-16,23;UBERON:0009856,2.41e-16,23;UBERON:0002365,5.12e-16,25;UBERON:0002330,5.12e-16,25;UBERON:0000344,4.65e-13,15;UBERON:0001007,3.77e-12,116;UBERON:0001555,3.77e-12,116;UBERON:0007026,3.77e-12,116;UBERON:0005409,6.81e-12,47;UBERON:0004119,1.06e-11,118;UBERON:0000925,1.06e-11,118;UBERON:0006595,1.06e-11,118;UBERON:0001242,2.83e-11,13;UBERON:0001262,2.83e-11,13;UBERON:0004786,2.83e-11,13;UBERON:0004921,5.65e-11,114;UBERON:0003929,1.56e-09,55;UBERON:0003914,1.25e-08,47;UBERON:0005172,2.58e-08,49;UBERON:0005173,2.58e-08,49;UBERON:0002417,2.58e-08,49;UBERON:0000916,2.58e-08,49;UBERON:0004923,1.08e-07,24;UBERON:0005256,1.42e-07,45;UBERON:0003350,1.60e-07,9;UBERON:0004808,1.60e-07,9;UBERON:0001277,1.60e-07,9;UBERON:0000490,3.00e-07,66|phase1_expression=0,9.77131141390211,5.45999087267443,10.8887116070459,7.01254021924886,3.02182689441402,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.7008658030214,0,0,3.83981814704176,4.35877634027623,5.7423196411502,4.30761996159075,5.17130958446134,5.70070258369122,6.04872311423834,2.21730510655305,0,0,0,3.17736781726402,2.99222361645286,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.65407546914134,1.97717564461025,1.1665793944457,0.139986421625363,0,0,0,0,0.257259436035947,1.43266719969378,0,0,0,0,0,0,0.449949858640699,2.96659908770092,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,9.46466264679525,4.75979933595425,24.8263468153396,18.1937396885347,19.2651561451854,8.42666520790511,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,8.33542321949138,1.55362730188303,1.48442139064825,0.520455980298408,0.304465478312141,0.922461989024234,0,0.352766121407114,1.88499886994513,2.71914464507811,6.07317299063629,0.884610551949874,0.323533699894818,0,0,0,0.585561594023094,0,4.34276993854605,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0.324482526135515,0,0.497627882440372,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,0.486412857275134,1.02339991197733,1.3173006917463,2.01309628140558,0,0,6.60837565967596,6.08236303326152,0,0.232236671860439,1.03093969057675,2.21851877085677,3.11329261382818,3.23383564391351,3.79623249235609,4.44687177754829,3.51869292320377,3.58121649674071,3.31438948102504,5.39291645192533,5.40345124686736,4.77939055810481,0,0.342745537829186,0,0.407302655690628,0,0.771494018793504,0.505892296994058,3.83786384746966,4.23896565171712,4.68909222902842,20.7516838961004,0.667380422864376,0.786235980452812,1.12431056192427,2.23146133527353,3.61765739628625,2.03700681425136,3.45235364940973,3.89124544260085,6.86403532970204,8.62609239164127,9.67566463938109,10.2972432127805,16.4176270665623,17.0427542845817,21.7099584613515,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.780534591431195,0,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.867894351489069,4.52373851817817,1.08781136763742,0,1.65562047782839,0.481651769963376,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.49465875882444,0.484393280087717,0.784068024066026,0.835606408021955,0.328281799490123,3.78925087618806,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.909188012978695,0.523511883968059,1.68499465279331,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0,0,0,0.486213434136588,0.628839487883947,0.919217542250071,0.44449345560323,0.206035057238894,1.28367683836726,0.758091635291392,1.2673964994512,1.88626341386076,0.842773567228942,1.02440243847791,0.516919220600519,0,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,1.37147700954166,1.06485483695602,0.953744759789284,0.290692833264657,0.941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,1.18635018124174,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,1.40358965067245,0.429742108096597,0.956441660344217,0.882365676478062,0.927471342481686|short_description=p3@Nr1h3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22259 | |||
|HGNC= | |||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc008kvd.2_5end | |||
|cluster_id=chr2:91035254..91035271,- | |||
|description=CAGE_peak_3_at_Nr1h3_5end | |||
|id=chr2:91035254..91035271,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-08,25;CL:0002563,1.60e-07,9;CL:0002251,1.60e-07,9;CL:0000239,2.96e-07,6;CL:0000677,2.96e-07,6;CL:0000584,2.96e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.55e-12!22;UBERON:0007499!1.55e-12!22;UBERON:0006925!1.55e-12!22;UBERON:0009497!1.55e-12!22;UBERON:0000015!1.55e-12!22;UBERON:0002423!1.55e-12!22;UBERON:0006235!1.55e-12!22;UBERON:0008835!1.55e-12!22;UBERON:0003894!1.55e-12!22;UBERON:0004161!1.55e-12!22;UBERON:0008836!1.55e-12!22;UBERON:0009854!2.03e-11!23;UBERON:0009856!2.03e-11!23;UBERON:0002365!8.88e-11!25;UBERON:0002330!8.88e-11!25;UBERON:0000344!5.21e-09!15;UBERON:0000160!8.17e-09!43;UBERON:0004119!2.02e-08!130;UBERON:0000925!2.02e-08!130;UBERON:0006595!2.02e-08!130;UBERON:0001007!2.27e-08!128;UBERON:0001555!2.27e-08!128;UBERON:0007026!2.27e-08!128;UBERON:0005172!2.28e-08!49;UBERON:0005173!2.28e-08!49;UBERON:0002417!2.28e-08!49;UBERON:0000916!2.28e-08!49;UBERON:0001242!5.72e-08!13;UBERON:0000060!5.72e-08!13;UBERON:0001262!5.72e-08!13;UBERON:0004786!5.72e-08!13;UBERON:0004921!1.16e-07!126;UBERON:0004185!1.16e-07!126;UBERON:0005409!2.41e-07!59;UBERON:0004923!3.01e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.38e-21,31;UBERON:0002107,2.17e-17,22;UBERON:0007499,2.17e-17,22;UBERON:0006925,2.17e-17,22;UBERON:0009497,2.17e-17,22;UBERON:0000015,2.17e-17,22;UBERON:0002423,2.17e-17,22;UBERON:0006235,2.17e-17,22;UBERON:0008835,2.17e-17,22;UBERON:0003894,2.17e-17,22;UBERON:0004161,2.17e-17,22;UBERON:0008836,2.17e-17,22;UBERON:0009854,2.41e-16,23;UBERON:0009856,2.41e-16,23;UBERON:0002365,5.12e-16,25;UBERON:0002330,5.12e-16,25;UBERON:0000344,4.65e-13,15;UBERON:0001007,3.77e-12,116;UBERON:0001555,3.77e-12,116;UBERON:0007026,3.77e-12,116;UBERON:0005409,6.81e-12,47;UBERON:0004119,1.06e-11,118;UBERON:0000925,1.06e-11,118;UBERON:0006595,1.06e-11,118;UBERON:0001242,2.83e-11,13;UBERON:0001262,2.83e-11,13;UBERON:0004786,2.83e-11,13;UBERON:0004921,5.65e-11,114;UBERON:0003929,1.56e-09,55;UBERON:0003914,1.25e-08,47;UBERON:0005172,2.58e-08,49;UBERON:0005173,2.58e-08,49;UBERON:0002417,2.58e-08,49;UBERON:0000916,2.58e-08,49;UBERON:0004923,1.08e-07,24;UBERON:0005256,1.42e-07,45;UBERON:0003350,1.60e-07,9;UBERON:0004808,1.60e-07,9;UBERON:0001277,1.60e-07,9;UBERON:0000490,3.00e-07,66 | |||
|phase1_expression=0,9.77131141390211,5.45999087267443,10.8887116070459,7.01254021924886,3.02182689441402,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.7008658030214,0,0,3.83981814704176,4.35877634027623,5.7423196411502,4.30761996159075,5.17130958446134,5.70070258369122,6.04872311423834,2.21730510655305,0,0,0,3.17736781726402,2.99222361645286,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.65407546914134,1.97717564461025,1.1665793944457,0.139986421625363,0,0,0,0,0.257259436035947,1.43266719969378,0,0,0,0,0,0,0.449949858640699,2.96659908770092,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,9.46466264679525,4.75979933595425,24.8263468153396,18.1937396885347,19.2651561451854,8.42666520790511,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,8.33542321949138,1.55362730188303,1.48442139064825,0.520455980298408,0.304465478312141,0.922461989024234,0,0.352766121407114,1.88499886994513,2.71914464507811,6.07317299063629,0.884610551949874,0.323533699894818,0,0,0,0.585561594023094,0,4.34276993854605,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0.324482526135515,0,0.497627882440372,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,0.486412857275134,1.02339991197733,1.3173006917463,2.01309628140558,0,0,6.60837565967596,6.08236303326152,0,0.232236671860439,1.03093969057675,2.21851877085677,3.11329261382818,3.23383564391351,3.79623249235609,4.44687177754829,3.51869292320377,3.58121649674071,3.31438948102504,5.39291645192533,5.40345124686736,4.77939055810481,0,0.342745537829186,0,0.407302655690628,0,0.771494018793504,0.505892296994058,3.83786384746966,4.23896565171712,4.68909222902842,20.7516838961004,0.667380422864376,0.786235980452812,1.12431056192427,2.23146133527353,3.61765739628625,2.03700681425136,3.45235364940973,3.89124544260085,6.86403532970204,8.62609239164127,9.67566463938109,10.2972432127805,16.4176270665623,17.0427542845817,21.7099584613515,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.780534591431195,0,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.867894351489069,4.52373851817817,1.08781136763742,0,1.65562047782839,0.481651769963376,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.49465875882444,0.484393280087717,0.784068024066026,0.835606408021955,0.328281799490123,3.78925087618806,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.909188012978695,0.523511883968059,1.68499465279331,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0,0,0,0.486213434136588,0.628839487883947,0.919217542250071,0.44449345560323,0.206035057238894,1.28367683836726,0.758091635291392,1.2673964994512,1.88626341386076,0.842773567228942,1.02440243847791,0.516919220600519,0,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,1.37147700954166,1.06485483695602,0.953744759789284,0.290692833264657,0.941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,1.18635018124174,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,1.40358965067245,0.429742108096597,0.956441660344217,0.882365676478062,0.927471342481686 | |||
|short_description=p3@Nr1h3 | |||
}} |
Latest revision as of 02:50, 27 September 2015
Short description: | p3@Nr1h3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nr1h3_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | 0bp_to_uc008kvd.2_5end |
EntrezGene: | Nr1h3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.55e-08 | 25 |
intestinal epithelial cell | 1.60e-07 | 9 |
epithelial cell of alimentary canal | 1.60e-07 | 9 |
brush border epithelial cell | 2.96e-07 | 6 |
gut absorptive cell | 2.96e-07 | 6 |
enterocyte | 2.96e-07 | 6 |