FFCP PHASE1:Mm9::chr2:24240833..24240872,+: Difference between revisions
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{{FFCP|EntrezGene=215632|HGNC=|MCL_coexpression_id=36|UniProt=Q8BLR5|association_with_transcript=0bp_to_ENSMUST00000056641,ENSMUST00000131930,ENSMUST00000133730,ENSMUST00000142522_5end|description=CAGE_peak_1_at_Psd4_5end|id=chr2:24240833..24240872,+|ontology_enrichment_celltype=CL:0000988!9.11e-10!32;CL:0002032!9.11e-10!32;CL:0000037!9.11e-10!32;CL:0000566!9.11e-10!32;CL:0000837!9.11e-10!32;CL:0002031!4.12e-09!25;CL:0000838!1.55e-08!12;CL:0000738!3.02e-08!17;CL:0002087!3.02e-08!17;CL:0000084!5.01e-08!11;CL:0000827!5.01e-08!11;CL:0000542!3.38e-07!13;CL:0000051!3.38e-07!13;CL:0000791!6.04e-07!9;CL:0000789!6.04e-07!9;CL:0002420!6.04e-07!9;CL:0002419!6.04e-07!9;CL:0000790!6.04e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,6.70e-12,32;CL:0002032,6.70e-12,32;CL:0000037,6.70e-12,32;CL:0000837,6.70e-12,32;CL:0002031,5.85e-11,25;CL:0000838,1.67e-09,12;CL:0000738,1.79e-09,17;CL:0002087,1.79e-09,17;CL:0000084,6.34e-09,11;CL:0000827,6.34e-09,11;CL:0000542,2.70e-08,13;CL:0000051,2.70e-08,13;CL:0000791,1.07e-07,9;CL:0000789,1.07e-07,9;CL:0002420,1.07e-07,9;CL:0002419,1.07e-07,9;CL:0000790,1.07e-07,9;CL:0000624,6.54e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.62e-19!48;UBERON:0002405!1.11e-17!70;UBERON:0002390!2.50e-17!45;UBERON:0003061!2.50e-17!45;UBERON:0004119!1.02e-12!130;UBERON:0000925!1.02e-12!130;UBERON:0006595!1.02e-12!130;UBERON:0004177!1.73e-12!29;UBERON:0001007!6.23e-12!128;UBERON:0001555!6.23e-12!128;UBERON:0007026!6.23e-12!128;UBERON:0004921!3.38e-11!126;UBERON:0004185!3.38e-11!126;UBERON:0005057!3.90e-11!51;UBERON:0003408!4.30e-10!24;UBERON:0002370!9.75e-10!23;UBERON:0000974!9.75e-10!23;UBERON:0004807!9.75e-10!23;UBERON:0005058!9.75e-10!23;UBERON:0003351!9.75e-10!23;UBERON:0009113!9.75e-10!23;UBERON:0003295!9.75e-10!23;UBERON:0009722!9.75e-10!23;UBERON:0005562!9.75e-10!23;UBERON:0007690!9.75e-10!23;UBERON:0003081!1.00e-09!88;UBERON:0000077!2.24e-09!97;UBERON:0006562!4.10e-09!24;UBERON:0001557!4.10e-09!24;UBERON:0001042!4.10e-09!24;UBERON:0008814!4.10e-09!24;UBERON:0009145!4.10e-09!24;UBERON:0001041!4.86e-09!92;UBERON:0005911!2.90e-08!69;UBERON:0001004!1.52e-07!42;UBERON:0003929!1.83e-07!55;UBERON:0000065!3.18e-07!41;UBERON:0000926!3.20e-07!193;UBERON:0004120!3.20e-07!193;UBERON:0006603!3.20e-07!193;UBERON:0000072!6.66e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-21,48;UBERON:0002405,1.15e-21,48;UBERON:0002390,6.22e-20,45;UBERON:0003061,6.22e-20,45;UBERON:0004177,6.78e-15,29;UBERON:0005057,6.78e-15,29;UBERON:0004119,2.07e-13,118;UBERON:0000925,2.07e-13,118;UBERON:0006595,2.07e-13,118;UBERON:0000077,3.26e-13,35;UBERON:0001007,1.54e-12,116;UBERON:0001555,1.54e-12,116;UBERON:0007026,1.54e-12,116;UBERON:0003408,3.84e-12,24;UBERON:0002370,9.77e-12,23;UBERON:0000974,9.77e-12,23;UBERON:0004807,9.77e-12,23;UBERON:0005058,9.77e-12,23;UBERON:0003351,9.77e-12,23;UBERON:0009113,9.77e-12,23;UBERON:0003295,9.77e-12,23;UBERON:0009722,9.77e-12,23;UBERON:0005562,9.77e-12,23;UBERON:0007690,9.77e-12,23;UBERON:0004921,1.00e-11,114;UBERON:0006562,8.35e-11,24;UBERON:0001557,8.35e-11,24;UBERON:0001042,8.35e-11,24;UBERON:0008814,8.35e-11,24;UBERON:0009145,8.35e-11,24;UBERON:0001041,3.68e-10,80;UBERON:0003081,5.56e-09,87;UBERON:0000072,1.75e-08,27;UBERON:0005911,3.34e-08,69;UBERON:0003929,3.96e-08,55;UBERON:0001004,4.63e-08,42;UBERON:0000065,1.06e-07,41|phase1_expression=0,3.14077866875425,4.09499315450582,1.20985684522732,2.50447864973174,0.503637815735669,2.10251376535973,95.4221360233249,44.6300249220784,65.7721318964802,54.4473138957106,45.7892192633231,100.152427009755,103.418336061674,16.6554880907831,24.0945568193893,11.8925519281785,61.8305844102146,65.8149281307546,53.4730961265518,4.25216450755349,52.1277493804648,58.2475529779826,15.0392877425802,11.6998733344257,1.72269589234506,1.7230479846363,1.29282739611533,3.04037471130198,3.78045194639896,4.8780712344167,0,0,0,0.288851619751275,0,0.204169356262369,104.21437605349,39.06676722619,77.4815141081221,88.2347232046521,81.282412710055,80.1092082501403,0,0,0,0,0,0,0,0,0,41.4423036962609,79.7898356212479,103.516890135879,0,0.85960031981627,0,0,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,5.99200221036809,3.07374644257244,0,0.270011876663381,0,0,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,5.05599912474307,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,3.76806803072898,65.2523466790873,2.3750742250372,2.08182392119363,0.608930956624282,0.922461989024234,0.60289056221049,0.587943535678524,0,5.19109432242185,3.03658649531814,32.7305904221453,3.88240439873782,12.367125033782,15.0311328471919,3.72783522436244,0.292780797011547,0,11.240110429178,4.79260498023681,2.99951365496704,6.09937089950711,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0,10.3257785606377,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0.60281927134286,0,0.12811372028485,0,0,0,0.567318240503458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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215632 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLR5 | |||
|association_with_transcript=0bp_to_ENSMUST00000056641,ENSMUST00000131930,ENSMUST00000133730,ENSMUST00000142522_5end | |||
|cluster_id=chr2:24240833..24240872,+ | |||
|description=CAGE_peak_1_at_Psd4_5end | |||
|id=chr2:24240833..24240872,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.11e-10!32;CL:0002032!9.11e-10!32;CL:0000037!9.11e-10!32;CL:0000566!9.11e-10!32;CL:0000837!9.11e-10!32;CL:0002031!4.12e-09!25;CL:0000838!1.55e-08!12;CL:0000738!3.02e-08!17;CL:0002087!3.02e-08!17;CL:0000084!5.01e-08!11;CL:0000827!5.01e-08!11;CL:0000542!3.38e-07!13;CL:0000051!3.38e-07!13;CL:0000791!6.04e-07!9;CL:0000789!6.04e-07!9;CL:0002420!6.04e-07!9;CL:0002419!6.04e-07!9;CL:0000790!6.04e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.70e-12,32;CL:0002032,6.70e-12,32;CL:0000037,6.70e-12,32;CL:0000837,6.70e-12,32;CL:0002031,5.85e-11,25;CL:0000838,1.67e-09,12;CL:0000738,1.79e-09,17;CL:0002087,1.79e-09,17;CL:0000084,6.34e-09,11;CL:0000827,6.34e-09,11;CL:0000542,2.70e-08,13;CL:0000051,2.70e-08,13;CL:0000791,1.07e-07,9;CL:0000789,1.07e-07,9;CL:0002420,1.07e-07,9;CL:0002419,1.07e-07,9;CL:0000790,1.07e-07,9;CL:0000624,6.54e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.62e-19!48;UBERON:0002405!1.11e-17!70;UBERON:0002390!2.50e-17!45;UBERON:0003061!2.50e-17!45;UBERON:0004119!1.02e-12!130;UBERON:0000925!1.02e-12!130;UBERON:0006595!1.02e-12!130;UBERON:0004177!1.73e-12!29;UBERON:0001007!6.23e-12!128;UBERON:0001555!6.23e-12!128;UBERON:0007026!6.23e-12!128;UBERON:0004921!3.38e-11!126;UBERON:0004185!3.38e-11!126;UBERON:0005057!3.90e-11!51;UBERON:0003408!4.30e-10!24;UBERON:0002370!9.75e-10!23;UBERON:0000974!9.75e-10!23;UBERON:0004807!9.75e-10!23;UBERON:0005058!9.75e-10!23;UBERON:0003351!9.75e-10!23;UBERON:0009113!9.75e-10!23;UBERON:0003295!9.75e-10!23;UBERON:0009722!9.75e-10!23;UBERON:0005562!9.75e-10!23;UBERON:0007690!9.75e-10!23;UBERON:0003081!1.00e-09!88;UBERON:0000077!2.24e-09!97;UBERON:0006562!4.10e-09!24;UBERON:0001557!4.10e-09!24;UBERON:0001042!4.10e-09!24;UBERON:0008814!4.10e-09!24;UBERON:0009145!4.10e-09!24;UBERON:0001041!4.86e-09!92;UBERON:0005911!2.90e-08!69;UBERON:0001004!1.52e-07!42;UBERON:0003929!1.83e-07!55;UBERON:0000065!3.18e-07!41;UBERON:0000926!3.20e-07!193;UBERON:0004120!3.20e-07!193;UBERON:0006603!3.20e-07!193;UBERON:0000072!6.66e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.15e-21,48;UBERON:0002405,1.15e-21,48;UBERON:0002390,6.22e-20,45;UBERON:0003061,6.22e-20,45;UBERON:0004177,6.78e-15,29;UBERON:0005057,6.78e-15,29;UBERON:0004119,2.07e-13,118;UBERON:0000925,2.07e-13,118;UBERON:0006595,2.07e-13,118;UBERON:0000077,3.26e-13,35;UBERON:0001007,1.54e-12,116;UBERON:0001555,1.54e-12,116;UBERON:0007026,1.54e-12,116;UBERON:0003408,3.84e-12,24;UBERON:0002370,9.77e-12,23;UBERON:0000974,9.77e-12,23;UBERON:0004807,9.77e-12,23;UBERON:0005058,9.77e-12,23;UBERON:0003351,9.77e-12,23;UBERON:0009113,9.77e-12,23;UBERON:0003295,9.77e-12,23;UBERON:0009722,9.77e-12,23;UBERON:0005562,9.77e-12,23;UBERON:0007690,9.77e-12,23;UBERON:0004921,1.00e-11,114;UBERON:0006562,8.35e-11,24;UBERON:0001557,8.35e-11,24;UBERON:0001042,8.35e-11,24;UBERON:0008814,8.35e-11,24;UBERON:0009145,8.35e-11,24;UBERON:0001041,3.68e-10,80;UBERON:0003081,5.56e-09,87;UBERON:0000072,1.75e-08,27;UBERON:0005911,3.34e-08,69;UBERON:0003929,3.96e-08,55;UBERON:0001004,4.63e-08,42;UBERON:0000065,1.06e-07,41 | |||
|phase1_expression=0,3.14077866875425,4.09499315450582,1.20985684522732,2.50447864973174,0.503637815735669,2.10251376535973,95.4221360233249,44.6300249220784,65.7721318964802,54.4473138957106,45.7892192633231,100.152427009755,103.418336061674,16.6554880907831,24.0945568193893,11.8925519281785,61.8305844102146,65.8149281307546,53.4730961265518,4.25216450755349,52.1277493804648,58.2475529779826,15.0392877425802,11.6998733344257,1.72269589234506,1.7230479846363,1.29282739611533,3.04037471130198,3.78045194639896,4.8780712344167,0,0,0,0.288851619751275,0,0.204169356262369,104.21437605349,39.06676722619,77.4815141081221,88.2347232046521,81.282412710055,80.1092082501403,0,0,0,0,0,0,0,0,0,41.4423036962609,79.7898356212479,103.516890135879,0,0.85960031981627,0,0,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,5.99200221036809,3.07374644257244,0,0.270011876663381,0,0,0.662605622854841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0,0.869593466105033,0,0,0,0.649776417447669,0.448026887097336,5.05599912474307,0,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,3.76806803072898,65.2523466790873,2.3750742250372,2.08182392119363,0.608930956624282,0.922461989024234,0.60289056221049,0.587943535678524,0,5.19109432242185,3.03658649531814,32.7305904221453,3.88240439873782,12.367125033782,15.0311328471919,3.72783522436244,0.292780797011547,0,11.240110429178,4.79260498023681,2.99951365496704,6.09937089950711,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,0,10.3257785606377,0,0.210441855886474,0.130120442962704,0.229902104433473,0,0.60281927134286,0,0.12811372028485,0,0,0,0.567318240503458,0.703804496655795,0.876782929710299,0.834141747676794,2.089512999133,1.23469281844766,0.59710280045548,5.61770549850588,8.23513302767089,5.96743348730745,0.207125772535502,1.17263029990548,0.180062061461015,0,0.983821158737019,0,0.232533944750408,0.536546802799238,1.28441876603886,0,0.492502392237286,0.810688095458557,0.438599962275997,1.09775057645525,0.671032093801859,0,0,17.5121954981413,5.55346189993443,0,0.464473343720877,1.03093969057675,1.81515172161008,2.00140239460383,1.71203063501303,5.21981967698963,0.658795818896044,3.51869292320377,1.1937388322469,4.09424582950152,4.49409704327111,2.59365659849633,2.19055400579804,0,0.456994050438915,0,0,0,0.210407459670956,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,0.592905254174298,15.6834399373128,13.562570662811,13.4917267430912,13.3887680116412,12.3000351473733,9.93040821947537,12.083237772934,6.48540907100142,4.11842119782122,5.75072826109418,3.72140947668503,2.18426371180192,2.27320990152401,0.179397413521912,0,11.6394509804961,1.13694847062291,0.325929952884052,0.169745085775188,0.234690248288502,2.34508760418542,0.952174563544055,0.780534591431195,2.99506773801763,4.87222317227305,3.02964060449226,7.04612253277673,9.84304396635605,5.06271705035291,12.0633027151418,9.79030230873677,3.44234991113325,2.75936746304733,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.890328018336276,0.488660878060728,2.3095817216155,0,0.971122544619926,0.906970670894253,0.188605079755898,1.18120757152309,0.614870295887855,1.55056975900933,1.09060118843252,3.20847640546249,2.52829406348653,0,1.03135543248187,0.680879211507576,0.18006109403131,0.129358683782755,0,0,0,0,0,10.3255551548033,36.2232841177132,0.220528398054962,1.15420377059036,0.807322133479528,0.904693873922338,0.477489376012546,1.14898629821543,2.62332752966866,0.370850604021019,33.4906926363791,9.70018279427146,16.4823129359043,26.5599524376614,33.0800031084881,26.9958244383697,7.30907248973578,9.23679585336143,7.32459861163446,2.86401185404534,1.26534397432454,0.406638934253697,0.86404272657441,0.418176592028937,1.31017538247707,1.07891477107857,2.31429676030941,1.57053565190418,4.01806417204558,9.94142900939081,2.25477175473676,0.149516546043979,0,0,0.774958940866387,0.844780627453891,0.352071715937262,0.2604087696879,0.104859344425711,0,0.576060012515731,105.231703169183,20.0697963137263,25.2668954625475,37.8069594865383,55.1402222655843,90.7973791350381,76.2039149956602,80.6384818373192,84.105052806807,75.4447385884498,98.7088352489669,108.568079144084,97.8474429482151,102.734797017599,0.226730383615211,0.887943813496259,0.0897138566094757,1.00730769818447,2.12508553435409,9.75948872346146,3.29672923681077,0.214368379079066,6.01886524842436,0.564751842617067,0,0,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0.798049746802062,2.21953687480374,3.40349403895612,2.30574478890781,0.919217542250071,1.55572709461131,0.824140228955577,3.20919209591815,1.51618327058278,2.28131369901216,1.32038438970253,1.03005658216871,0.960377286073039,0.804096565378586,0,0.927074607558844,1.15745532278223,2.06042950401653,2.64958056241915,2.40008476669791,1.95223386775271,1.66905332963125,1.30811774969096,1.2234219453993,1.4384483341585,1.46342378298218,1.05227884575137,1.08643291076689,1.12228454331548,1.66089025373844,1.0835493061312,0.409231043169689,1.39443157067369,2.70069255373598,0.99924231175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| |||
|short_description=p1@Psd4 | |||
}} |
Latest revision as of 09:39, 26 September 2015
Short description: | p1@Psd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000056641, ENSMUST00000131930, ENSMUST00000133730, ENSMUST00000142522_5end |
EntrezGene: | Psd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.70e-12 | 32 |
hematopoietic oligopotent progenitor cell | 6.70e-12 | 32 |
hematopoietic stem cell | 6.70e-12 | 32 |
hematopoietic multipotent progenitor cell | 6.70e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 5.85e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.67e-09 | 12 |
leukocyte | 1.79e-09 | 17 |
nongranular leukocyte | 1.79e-09 | 17 |
T cell | 6.34e-09 | 11 |
pro-T cell | 6.34e-09 | 11 |
lymphocyte | 2.70e-08 | 13 |
common lymphoid progenitor | 2.70e-08 | 13 |
mature alpha-beta T cell | 1.07e-07 | 9 |
alpha-beta T cell | 1.07e-07 | 9 |
immature T cell | 1.07e-07 | 9 |
mature T cell | 1.07e-07 | 9 |
immature alpha-beta T cell | 1.07e-07 | 9 |
CD4-positive, alpha-beta T cell | 6.54e-07 | 8 |