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{{FFCP|EntrezGene=20844|HGNC=|MCL_coexpression_id=759|UniProt=|association_with_transcript=0bp_to_ENSMUST00000128777,uc008iki.1_5end|description=CAGE_peak_4_at_Stam_5end|id=chr2:14052469..14052480,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,2.66e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.66e-11!48;UBERON:0004177!7.16e-11!29;UBERON:0002390!1.87e-09!45;UBERON:0003061!1.87e-09!45;UBERON:0004119!2.49e-09!130;UBERON:0000925!2.49e-09!130;UBERON:0006595!2.49e-09!130;UBERON:0004923!3.14e-09!24;UBERON:0002370!3.19e-09!23;UBERON:0000974!3.19e-09!23;UBERON:0004807!3.19e-09!23;UBERON:0005058!3.19e-09!23;UBERON:0003351!3.19e-09!23;UBERON:0009113!3.19e-09!23;UBERON:0003295!3.19e-09!23;UBERON:0009722!3.19e-09!23;UBERON:0005562!3.19e-09!23;UBERON:0007690!3.19e-09!23;UBERON:0001007!4.11e-09!128;UBERON:0001555!4.11e-09!128;UBERON:0007026!4.11e-09!128;UBERON:0006562!1.46e-08!24;UBERON:0003408!1.46e-08!24;UBERON:0001557!1.46e-08!24;UBERON:0001042!1.46e-08!24;UBERON:0008814!1.46e-08!24;UBERON:0009145!1.46e-08!24;UBERON:0004921!2.73e-08!126;UBERON:0004185!2.73e-08!126;UBERON:0000344!1.81e-07!15;UBERON:0000160!2.87e-07!43;UBERON:0003081!4.70e-07!88;UBERON:0000072!6.61e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.61e-16,23;UBERON:0000974,2.61e-16,23;UBERON:0004807,2.61e-16,23;UBERON:0005058,2.61e-16,23;UBERON:0003351,2.61e-16,23;UBERON:0009113,2.61e-16,23;UBERON:0003295,2.61e-16,23;UBERON:0009722,2.61e-16,23;UBERON:0005562,2.61e-16,23;UBERON:0007690,2.61e-16,23;UBERON:0006562,1.74e-15,24;UBERON:0003408,1.74e-15,24;UBERON:0001557,1.74e-15,24;UBERON:0001042,1.74e-15,24;UBERON:0008814,1.74e-15,24;UBERON:0009145,1.74e-15,24;UBERON:0000072,2.20e-13,27;UBERON:0004177,3.16e-12,29;UBERON:0005057,3.16e-12,29;UBERON:0000077,5.33e-11,35;UBERON:0002193,1.20e-10,48;UBERON:0002405,1.20e-10,48;UBERON:0002390,2.57e-10,45;UBERON:0003061,2.57e-10,45;UBERON:0007811,3.34e-09,36;UBERON:0003929,5.86e-09,55;UBERON:0004119,1.20e-08,118;UBERON:0000925,1.20e-08,118;UBERON:0006595,1.20e-08,118;UBERON:0001007,4.18e-08,116;UBERON:0001555,4.18e-08,116;UBERON:0007026,4.18e-08,116;UBERON:0000065,1.10e-07,41;UBERON:0000344,1.30e-07,15;UBERON:0004921,1.39e-07,114;UBERON:0001004,1.99e-07,42;UBERON:0000153,3.50e-07,43;UBERON:0000160,4.78e-07,31;UBERON:0001242,5.09e-07,13;UBERON:0001262,5.09e-07,13;UBERON:0004786,5.09e-07,13;UBERON:0000490,9.09e-07,66|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0.33575854382378,1.63528848416868,1.42035655785734,0,0,0.171217968225505,0.0797721589953364,1.36960583944965,0.961624426608971,0,0.202475267389826,0,0.473193248037357,0.274228867211478,0.84877930359606,0,2.38298282882125,4.70159620450084,0.95995453676044,1.37645568640302,0.57423196411502,0.430761996159075,0.646413698057667,2.66032787238923,1.26015064879965,2.66076612786366,0,0,0,3.75507105676657,1.99481574430191,5.51257261908397,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0,1.76922110389975,0.485300549842228,0.220841518460394,0.969750506270444,3.72783522436244,0,0,1.27728527604296,5.27186547826049,3.59941638596045,3.68503658511888,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0.61734640922383,0,3.51106593656617,1.54408744268829,1.70498099637356,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.793351699990633,0,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0.760902504450237,0.474529061544512,0.823494773620054,1.25667604400135,0.397912944082302,0.779856348476481,0,1.72910439899755,2.58883655230677,0,0,0,0,0.387904974335251,0,0,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,0,0,0,0,0.180938774784468,0,0,0,0,0.512612642393558,0.412773735926445,0.555583582109135,0.941842285023455,0.410082683163076,0,5.77926661979108,7.55737842547753,5.52799895217695,0,0,0,0,0,0,0,0,0,4.66613903850454,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,8.53230025696081,0.202725215290164,1.33524244314275,1.55904987573354,2.14832034800978,4.37098980518783,3.4856680360791,3.10148007066612,5.85605409699256,7.31585343887998,6.25122347848411,6.1398464866044,6.92725259810372,12.5058285334279,0,0,0,0,0.772758376128762,0.187682475451182,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0.429742108096597,0.765153328275374,0,0|short_description=p4@Stam}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20844
|HGNC=
|MCL_coexpression_id=759
|TSSclassifier=NA
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000128777,uc008iki.1_5end
|cluster_id=chr2:14052469..14052480,+
|description=CAGE_peak_4_at_Stam_5end
|id=chr2:14052469..14052480,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002250,2.66e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!5.66e-11!48;UBERON:0004177!7.16e-11!29;UBERON:0002390!1.87e-09!45;UBERON:0003061!1.87e-09!45;UBERON:0004119!2.49e-09!130;UBERON:0000925!2.49e-09!130;UBERON:0006595!2.49e-09!130;UBERON:0004923!3.14e-09!24;UBERON:0002370!3.19e-09!23;UBERON:0000974!3.19e-09!23;UBERON:0004807!3.19e-09!23;UBERON:0005058!3.19e-09!23;UBERON:0003351!3.19e-09!23;UBERON:0009113!3.19e-09!23;UBERON:0003295!3.19e-09!23;UBERON:0009722!3.19e-09!23;UBERON:0005562!3.19e-09!23;UBERON:0007690!3.19e-09!23;UBERON:0001007!4.11e-09!128;UBERON:0001555!4.11e-09!128;UBERON:0007026!4.11e-09!128;UBERON:0006562!1.46e-08!24;UBERON:0003408!1.46e-08!24;UBERON:0001557!1.46e-08!24;UBERON:0001042!1.46e-08!24;UBERON:0008814!1.46e-08!24;UBERON:0009145!1.46e-08!24;UBERON:0004921!2.73e-08!126;UBERON:0004185!2.73e-08!126;UBERON:0000344!1.81e-07!15;UBERON:0000160!2.87e-07!43;UBERON:0003081!4.70e-07!88;UBERON:0000072!6.61e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.61e-16,23;UBERON:0000974,2.61e-16,23;UBERON:0004807,2.61e-16,23;UBERON:0005058,2.61e-16,23;UBERON:0003351,2.61e-16,23;UBERON:0009113,2.61e-16,23;UBERON:0003295,2.61e-16,23;UBERON:0009722,2.61e-16,23;UBERON:0005562,2.61e-16,23;UBERON:0007690,2.61e-16,23;UBERON:0006562,1.74e-15,24;UBERON:0003408,1.74e-15,24;UBERON:0001557,1.74e-15,24;UBERON:0001042,1.74e-15,24;UBERON:0008814,1.74e-15,24;UBERON:0009145,1.74e-15,24;UBERON:0000072,2.20e-13,27;UBERON:0004177,3.16e-12,29;UBERON:0005057,3.16e-12,29;UBERON:0000077,5.33e-11,35;UBERON:0002193,1.20e-10,48;UBERON:0002405,1.20e-10,48;UBERON:0002390,2.57e-10,45;UBERON:0003061,2.57e-10,45;UBERON:0007811,3.34e-09,36;UBERON:0003929,5.86e-09,55;UBERON:0004119,1.20e-08,118;UBERON:0000925,1.20e-08,118;UBERON:0006595,1.20e-08,118;UBERON:0001007,4.18e-08,116;UBERON:0001555,4.18e-08,116;UBERON:0007026,4.18e-08,116;UBERON:0000065,1.10e-07,41;UBERON:0000344,1.30e-07,15;UBERON:0004921,1.39e-07,114;UBERON:0001004,1.99e-07,42;UBERON:0000153,3.50e-07,43;UBERON:0000160,4.78e-07,31;UBERON:0001242,5.09e-07,13;UBERON:0001262,5.09e-07,13;UBERON:0004786,5.09e-07,13;UBERON:0000490,9.09e-07,66
|phase1_expression=0,0.348975407639361,0,0,0.500895729946347,0.33575854382378,1.63528848416868,1.42035655785734,0,0,0.171217968225505,0.0797721589953364,1.36960583944965,0.961624426608971,0,0.202475267389826,0,0.473193248037357,0.274228867211478,0.84877930359606,0,2.38298282882125,4.70159620450084,0.95995453676044,1.37645568640302,0.57423196411502,0.430761996159075,0.646413698057667,2.66032787238923,1.26015064879965,2.66076612786366,0,0,0,3.75507105676657,1.99481574430191,5.51257261908397,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0,1.76922110389975,0.485300549842228,0.220841518460394,0.969750506270444,3.72783522436244,0,0,1.27728527604296,5.27186547826049,3.59941638596045,3.68503658511888,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0.215567992932842,0.189106080167819,0,0,0,0.348252166522167,0.61734640922383,0,3.51106593656617,1.54408744268829,1.70498099637356,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0.330418782983798,0.793351699990633,0,0.232236671860439,0.128867461322093,0.403367049246685,0.444756087689741,0.760902504450237,0.474529061544512,0.823494773620054,1.25667604400135,0.397912944082302,0.779856348476481,0,1.72910439899755,2.58883655230677,0,0,0,0,0.387904974335251,0,0,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40803024838226,0,0,0,0,0.180938774784468,0,0,0,0,0.512612642393558,0.412773735926445,0.555583582109135,0.941842285023455,0.410082683163076,0,5.77926661979108,7.55737842547753,5.52799895217695,0,0,0,0,0,0,0,0,0,4.66613903850454,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,8.53230025696081,0.202725215290164,1.33524244314275,1.55904987573354,2.14832034800978,4.37098980518783,3.4856680360791,3.10148007066612,5.85605409699256,7.31585343887998,6.25122347848411,6.1398464866044,6.92725259810372,12.5058285334279,0,0,0,0,0.772758376128762,0.187682475451182,0,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.37456602987953,0.128050304809739,0.17230640686684,0,0,0,0,0.147198920134397,0,0.177475806159338,0.476872379894642,0.290692833264657,0,0,0,0.263069711437843,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0.429742108096597,0.765153328275374,0,0
|short_description=p4@Stam
}}

Latest revision as of 19:57, 25 September 2015

Short description:p4@Stam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Stam_5end
Coexpression cluster:MCL_coexpression_mm9:759
Association with transcript: 0bp_to_ENSMUST00000128777, uc008iki.1_5end
EntrezGene:Stam
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Stam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.69
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I14.67
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B58.53
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F83.49
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C45.86
thymus, neonate N07.CNhs11211.713-19D37.32
thymus, neonate N10.CNhs11194.748-24E46.25
thymus, neonate N20.CNhs11186.820-7A26.14
thymus, neonate N25.CNhs11125.1362-25G76.93
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.13
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal crypt stem cell2.66e-073

Uber anatomy
Ontology termp-valuen
thymus2.61e-1623
neck2.61e-1623
respiratory system epithelium2.61e-1623
hemolymphoid system gland2.61e-1623
pharyngeal epithelium2.61e-1623
thymic region2.61e-1623
pharyngeal gland2.61e-1623
entire pharyngeal arch endoderm2.61e-1623
thymus primordium2.61e-1623
early pharyngeal endoderm2.61e-1623
pharynx1.74e-1524
gland of gut1.74e-1524
upper respiratory tract1.74e-1524
chordate pharynx1.74e-1524
pharyngeal arch system1.74e-1524
pharyngeal region of foregut1.74e-1524
segment of respiratory tract2.20e-1327
hemopoietic organ3.16e-1229
immune organ3.16e-1229
mixed endoderm/mesoderm-derived structure5.33e-1135
hemolymphoid system1.20e-1048
immune system1.20e-1048
hematopoietic system2.57e-1045
blood island2.57e-1045
craniocervical region3.34e-0936
gut epithelium5.86e-0955
endoderm-derived structure1.20e-08118
endoderm1.20e-08118
presumptive endoderm1.20e-08118
digestive system4.18e-08116
digestive tract4.18e-08116
primitive gut4.18e-08116
respiratory tract1.10e-0741
mucosa1.30e-0715
subdivision of digestive tract1.39e-07114
respiratory system1.99e-0742
anterior region of body3.50e-0743
intestine4.78e-0731
intestinal mucosa5.09e-0713
wall of intestine5.09e-0713
gastrointestinal system mucosa5.09e-0713
unilaminar epithelium9.09e-0766
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