FFCP PHASE1:Mm9::chr1:133534883..133534915,+: Difference between revisions
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{{FFCP|EntrezGene=13034|HGNC=|MCL_coexpression_id=36|UniProt=P70269,B8YPG2|association_with_transcript=0bp_to_ENSMUST00000073350,NM_007799,uc007cnm.1,uc007cnn.2_5end|description=CAGE_peak_3_at_Ctse_5end|id=chr1:133534883..133534915,+|ontology_enrichment_celltype=CL:0000988!5.15e-09!32;CL:0002032!5.15e-09!32;CL:0000037!5.15e-09!32;CL:0000566!5.15e-09!32;CL:0000837!5.15e-09!32;CL:0002031!3.83e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,2.88e-13,32;CL:0002032,2.88e-13,32;CL:0000037,2.88e-13,32;CL:0000837,2.88e-13,32;CL:0002031,2.21e-10,25;CL:0002320,5.92e-10,46;CL:0000134,5.92e-10,46;CL:0000049,7.73e-09,19;CL:0000738,4.94e-08,17;CL:0002087,4.94e-08,17;CL:0000791,1.45e-07,9;CL:0000789,1.45e-07,9;CL:0002420,1.45e-07,9;CL:0002419,1.45e-07,9;CL:0000790,1.45e-07,9;CL:0000763,5.31e-07,16;CL:0000219,6.00e-07,54;CL:0000624,8.38e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.76e-20!48;UBERON:0002405!6.23e-20!70;UBERON:0002390!6.47e-19!45;UBERON:0003061!6.47e-19!45;UBERON:0004177!6.13e-11!29;UBERON:0005057!1.01e-10!51;UBERON:0000926!3.74e-10!193;UBERON:0004120!3.74e-10!193;UBERON:0006603!3.74e-10!193;UBERON:0001041!1.46e-09!92;UBERON:0000077!1.77e-09!97;UBERON:0002371!7.17e-09!16;UBERON:0003408!1.32e-08!24;UBERON:0001474!1.68e-08!22;UBERON:0004765!1.68e-08!22;UBERON:0001434!1.68e-08!22;UBERON:0003104!2.24e-08!131;UBERON:0009142!2.24e-08!131;UBERON:0002370!2.82e-08!23;UBERON:0000974!2.82e-08!23;UBERON:0004807!2.82e-08!23;UBERON:0005058!2.82e-08!23;UBERON:0003351!2.82e-08!23;UBERON:0009113!2.82e-08!23;UBERON:0003295!2.82e-08!23;UBERON:0009722!2.82e-08!23;UBERON:0005562!2.82e-08!23;UBERON:0007690!2.82e-08!23;UBERON:0003081!3.07e-08!88;UBERON:0006562!7.07e-08!24;UBERON:0001557!7.07e-08!24;UBERON:0001042!7.07e-08!24;UBERON:0008814!7.07e-08!24;UBERON:0009145!7.07e-08!24;UBERON:0001004!9.01e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.65e-28,48;UBERON:0002405,3.65e-28,48;UBERON:0002390,4.68e-26,45;UBERON:0003061,4.68e-26,45;UBERON:0004177,2.69e-15,29;UBERON:0005057,2.69e-15,29;UBERON:0000077,7.13e-13,35;UBERON:0003408,3.88e-12,24;UBERON:0002370,1.07e-11,23;UBERON:0000974,1.07e-11,23;UBERON:0004807,1.07e-11,23;UBERON:0005058,1.07e-11,23;UBERON:0003351,1.07e-11,23;UBERON:0009113,1.07e-11,23;UBERON:0003295,1.07e-11,23;UBERON:0009722,1.07e-11,23;UBERON:0005562,1.07e-11,23;UBERON:0007690,1.07e-11,23;UBERON:0001474,1.29e-11,22;UBERON:0004765,1.29e-11,22;UBERON:0001434,1.29e-11,22;UBERON:0003081,1.83e-11,87;UBERON:0002371,2.74e-11,16;UBERON:0006562,6.99e-11,24;UBERON:0001557,6.99e-11,24;UBERON:0001042,6.99e-11,24;UBERON:0008814,6.99e-11,24;UBERON:0009145,6.99e-11,24;UBERON:0001041,1.17e-10,80;UBERON:0002204,4.68e-10,32;UBERON:0002384,5.92e-10,46;UBERON:0001004,1.49e-09,42;UBERON:0000926,2.61e-09,120;UBERON:0004120,2.61e-09,120;UBERON:0006603,2.61e-09,120;UBERON:0000065,3.79e-09,41;UBERON:0000072,7.87e-09,27;UBERON:0005911,5.91e-08,69;UBERON:0007811,3.99e-07,36;UBERON:0003929,6.54e-07,55;UBERON:0001007,8.69e-07,116;UBERON:0001555,8.69e-07,116;UBERON:0007026,8.69e-07,116|phase1_expression=0,0,0,0,0,0,0,63.9160451035803,28.1577444303333,36.280001579909,3.76679530096111,3.35043067780413,69.5074963520695,77.8041581529077,12.6581709489952,17.412872995525,6.29605690315332,64.985206063797,67.5974157676292,54.3218754301479,2.46625541438102,0.0992909512008853,0,8.95957567643077,9.1763712426868,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,145.649007496444,78.9148697969038,99.9930350989955,210.586872715103,195.351008698115,159.73290614725,0,0,0,0,0,0,0,0.139986421625363,0,63.0862598777089,53.6767985088395,45.7087566833751,0,0,0,0.202316460859598,0,0,0,0,11.2487464660175,19.7773272513395,7.104801149461,11.085204089181,11.1423308543251,0,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0,0.191690942036473,0,0,0,0.153606533256243,0,0,0.52091337055676,0.558365998002762,0.56276261003168,0,0.294628585473668,0.284743361598206,0,0.37863096666592,0,0,0.860423876981386,1.3599426674155,1.07940638327563,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,3.4255163915718,93.7355138802762,2.22663208597237,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.587943535678524,0.376999773989026,0,2.02439099687876,30.9613693182456,4.52947179852746,15.2380647737672,17.455509112868,0,0,0,13.2837668708468,32.4698987411044,16.197373736822,24.6516240521746,0,0,0,0,0,0,0.162241263067758,0.305518091550949,17.0437549735827,1.0108910337347,13.2578369208479,0,0,0.180062129805349,0.452114453507145,0,0,0.0937017245597288,5.17406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0.59710280045548,18.9597560574573,16.9849618695712,11.9348669746149,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.648550476366846,0.584799949701329,0.439100230582101,0.805238512562231,0,0.102904612379284,1.65209391491899,1.58670339998127,0,0.464473343720877,0.257734922644187,0.403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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13034 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=P70269,B8YPG2 | |||
|association_with_transcript=0bp_to_ENSMUST00000073350,NM_007799,uc007cnm.1,uc007cnn.2_5end | |||
|cluster_id=chr1:133534883..133534915,+ | |||
|description=CAGE_peak_3_at_Ctse_5end | |||
|id=chr1:133534883..133534915,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.15e-09!32;CL:0002032!5.15e-09!32;CL:0000037!5.15e-09!32;CL:0000566!5.15e-09!32;CL:0000837!5.15e-09!32;CL:0002031!3.83e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.88e-13,32;CL:0002032,2.88e-13,32;CL:0000037,2.88e-13,32;CL:0000837,2.88e-13,32;CL:0002031,2.21e-10,25;CL:0002320,5.92e-10,46;CL:0000134,5.92e-10,46;CL:0000049,7.73e-09,19;CL:0000738,4.94e-08,17;CL:0002087,4.94e-08,17;CL:0000791,1.45e-07,9;CL:0000789,1.45e-07,9;CL:0002420,1.45e-07,9;CL:0002419,1.45e-07,9;CL:0000790,1.45e-07,9;CL:0000763,5.31e-07,16;CL:0000219,6.00e-07,54;CL:0000624,8.38e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.76e-20!48;UBERON:0002405!6.23e-20!70;UBERON:0002390!6.47e-19!45;UBERON:0003061!6.47e-19!45;UBERON:0004177!6.13e-11!29;UBERON:0005057!1.01e-10!51;UBERON:0000926!3.74e-10!193;UBERON:0004120!3.74e-10!193;UBERON:0006603!3.74e-10!193;UBERON:0001041!1.46e-09!92;UBERON:0000077!1.77e-09!97;UBERON:0002371!7.17e-09!16;UBERON:0003408!1.32e-08!24;UBERON:0001474!1.68e-08!22;UBERON:0004765!1.68e-08!22;UBERON:0001434!1.68e-08!22;UBERON:0003104!2.24e-08!131;UBERON:0009142!2.24e-08!131;UBERON:0002370!2.82e-08!23;UBERON:0000974!2.82e-08!23;UBERON:0004807!2.82e-08!23;UBERON:0005058!2.82e-08!23;UBERON:0003351!2.82e-08!23;UBERON:0009113!2.82e-08!23;UBERON:0003295!2.82e-08!23;UBERON:0009722!2.82e-08!23;UBERON:0005562!2.82e-08!23;UBERON:0007690!2.82e-08!23;UBERON:0003081!3.07e-08!88;UBERON:0006562!7.07e-08!24;UBERON:0001557!7.07e-08!24;UBERON:0001042!7.07e-08!24;UBERON:0008814!7.07e-08!24;UBERON:0009145!7.07e-08!24;UBERON:0001004!9.01e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.65e-28,48;UBERON:0002405,3.65e-28,48;UBERON:0002390,4.68e-26,45;UBERON:0003061,4.68e-26,45;UBERON:0004177,2.69e-15,29;UBERON:0005057,2.69e-15,29;UBERON:0000077,7.13e-13,35;UBERON:0003408,3.88e-12,24;UBERON:0002370,1.07e-11,23;UBERON:0000974,1.07e-11,23;UBERON:0004807,1.07e-11,23;UBERON:0005058,1.07e-11,23;UBERON:0003351,1.07e-11,23;UBERON:0009113,1.07e-11,23;UBERON:0003295,1.07e-11,23;UBERON:0009722,1.07e-11,23;UBERON:0005562,1.07e-11,23;UBERON:0007690,1.07e-11,23;UBERON:0001474,1.29e-11,22;UBERON:0004765,1.29e-11,22;UBERON:0001434,1.29e-11,22;UBERON:0003081,1.83e-11,87;UBERON:0002371,2.74e-11,16;UBERON:0006562,6.99e-11,24;UBERON:0001557,6.99e-11,24;UBERON:0001042,6.99e-11,24;UBERON:0008814,6.99e-11,24;UBERON:0009145,6.99e-11,24;UBERON:0001041,1.17e-10,80;UBERON:0002204,4.68e-10,32;UBERON:0002384,5.92e-10,46;UBERON:0001004,1.49e-09,42;UBERON:0000926,2.61e-09,120;UBERON:0004120,2.61e-09,120;UBERON:0006603,2.61e-09,120;UBERON:0000065,3.79e-09,41;UBERON:0000072,7.87e-09,27;UBERON:0005911,5.91e-08,69;UBERON:0007811,3.99e-07,36;UBERON:0003929,6.54e-07,55;UBERON:0001007,8.69e-07,116;UBERON:0001555,8.69e-07,116;UBERON:0007026,8.69e-07,116 | |||
|phase1_expression=0,0,0,0,0,0,0,63.9160451035803,28.1577444303333,36.280001579909,3.76679530096111,3.35043067780413,69.5074963520695,77.8041581529077,12.6581709489952,17.412872995525,6.29605690315332,64.985206063797,67.5974157676292,54.3218754301479,2.46625541438102,0.0992909512008853,0,8.95957567643077,9.1763712426868,0,0,0,0.190023419456374,0.252030129759931,0.443461021310609,0,0,0,0,0,0,145.649007496444,78.9148697969038,99.9930350989955,210.586872715103,195.351008698115,159.73290614725,0,0,0,0,0,0,0,0.139986421625363,0,63.0862598777089,53.6767985088395,45.7087566833751,0,0,0,0.202316460859598,0,0,0,0,11.2487464660175,19.7773272513395,7.104801149461,11.085204089181,11.1423308543251,0,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0,0.191690942036473,0,0,0,0.153606533256243,0,0,0.52091337055676,0.558365998002762,0.56276261003168,0,0.294628585473668,0.284743361598206,0,0.37863096666592,0,0,0.860423876981386,1.3599426674155,1.07940638327563,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,3.4255163915718,93.7355138802762,2.22663208597237,0.173485326766136,0.913396434936424,0.461230994512117,0.60289056221049,0.587943535678524,0.376999773989026,0,2.02439099687876,30.9613693182456,4.52947179852746,15.2380647737672,17.455509112868,0,0,0,13.2837668708468,32.4698987411044,16.197373736822,24.6516240521746,0,0,0,0,0,0,0.162241263067758,0.305518091550949,17.0437549735827,1.0108910337347,13.2578369208479,0,0,0.180062129805349,0.452114453507145,0,0,0.0937017245597288,5.17406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0.59710280045548,18.9597560574573,16.9849618695712,11.9348669746149,0,0,0,0.23674473558521,0,0.154267112887378,0,0.268273401399619,0.350296027101508,0,0.32833492815819,0.648550476366846,0.584799949701329,0.439100230582101,0.805238512562231,0,0.102904612379284,1.65209391491899,1.58670339998127,0,0.464473343720877,0.257734922644187,0.403367049246685,0,0,0.474529061544512,0,0.251335208800269,0.596869416123452,0.974820435595601,1.79763881730844,0.864552199498777,1.1948476395262,0,0,0,0,0.581857461502877,0.210407459670956,0.442655759869801,0.442830443938806,0,0.246794327843601,1.48226313543574,0.83422552858047,0.196558995113203,1.12431056192427,1.62288097110802,4.3411888755435,3.8193877767213,6.32931502391783,10.0523840600522,2.19649130550465,5.75072826109418,4.09355042435354,2.49630138491648,1.51547326768267,0.717589654087649,0,7.7596339869974,0,0.162964976442026,0.339490171550376,0.234690248288502,1.34005005953453,0.238043640886014,1.36593553500459,3.4679731703362,2.43611158613652,2.23236676120482,5.73521601505083,6.73471429276993,4.62876987460837,75.3956419696361,21.2123216689297,0.983528546038072,2.75936746304733,0.481651769963376,0.117211686592203,0,2.27223834483936,0,0,0,0,0,0,0,0,0,0.321321316421807,1.84522110770749,0.712262414669021,0.162886959353576,3.13443233647817,1.32745138339963,0.242780636154981,0,0.565815239267694,1.18120757152309,0.922305443831782,1.03371317267288,0.363533729477506,1.06949213515416,2.52829406348653,1.05418608574999,4.12542172992747,1.02131881726136,0,0.129358683782755,0.428674070063185,0,0,0.329098041204242,0,0.469343416127421,0,0.220528398054962,0.98931751764888,0.484393280087717,0.361877549568935,0.238744688006273,0.328281799490123,1.1659233465194,0.18542530201051,29.7315332588264,8.04908785056568,13.8895895527284,13.3741604473331,17.3601669205702,18.9885883761414,57.622687767917,58.3597556189654,60.8079884739465,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.909188012978695,1.04702376793612,1.03691978633434,6.21339313086926,0,0,0,0.194451188344048,0.774958940866387,1.85851738039856,0.469428954583016,0.2604087696879,0.104859344425711,0,0,60.6741351606102,3.64905387522296,9.55211901632893,12.8621614748017,24.8847106977799,28.0140710241584,32.9335531684715,32.7870750327561,36.6508213311776,45.6478771863449,44.1618690899361,48.0467352046979,42.2369984801046,61.4772505475053,0.226730383615211,0,0,0,5.60249822693352,1.50145980360946,3.29672923681077,2.14368379079066,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,1.64828045791115,1.60459604795908,0.505394423527595,0.50695859978048,0.754505365544305,0.468207537349412,0.89635213366817,0.746661096422973,0,0.579421629724277,0.578727661391115,0.824171801606613,0.883193520806384,0.342869252385415,0.532427418478012,0.238436189947321,0.726732083161643,0.564656282491984,0.507687647350059,1.09756783723664,0.263069711437843,0.135804113845862,1.12228454331548,0.593175090620871,0.788035859004508,0,0.77468420592983,1.35034627686799,0.249810577937946,1.16965804222704,2.57845264857958,1.3390183244819,3.75005412503176,5.33296021926969 | |||
|short_description=p3@Ctse | |||
}} |
Latest revision as of 08:31, 26 September 2015
Short description: | p3@Ctse |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ctse_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000073350, NM_007799, uc007cnm.1, uc007cnn.2_5end |
EntrezGene: | Ctse |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.88e-13 | 32 |
hematopoietic oligopotent progenitor cell | 2.88e-13 | 32 |
hematopoietic stem cell | 2.88e-13 | 32 |
hematopoietic multipotent progenitor cell | 2.88e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 2.21e-10 | 25 |
connective tissue cell | 5.92e-10 | 46 |
mesenchymal cell | 5.92e-10 | 46 |
common myeloid progenitor | 7.73e-09 | 19 |
leukocyte | 4.94e-08 | 17 |
nongranular leukocyte | 4.94e-08 | 17 |
mature alpha-beta T cell | 1.45e-07 | 9 |
alpha-beta T cell | 1.45e-07 | 9 |
immature T cell | 1.45e-07 | 9 |
mature T cell | 1.45e-07 | 9 |
immature alpha-beta T cell | 1.45e-07 | 9 |
myeloid cell | 5.31e-07 | 16 |
motile cell | 6.00e-07 | 54 |
CD4-positive, alpha-beta T cell | 8.38e-07 | 8 |