FFCP PHASE1:Mm9::chr17:86023259..86023303,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=492|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:86023259..86023303,+|id=chr17:86023259..86023303,+|ontology_enrichment_celltype=CL:0002319!6.59e-12!43;CL:0000221!1.89e-11!44;CL:0000133!1.89e-11!44;CL:0000117!1.42e-10!23;CL:0000337!1.42e-10!23;CL:0000055!4.08e-09!50;CL:0000540!2.06e-08!33;CL:0000047!2.06e-08!33;CL:0000031!2.06e-08!33;CL:0000404!2.06e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.99e-13,23;CL:0000337,3.99e-13,23;CL:0002319,1.56e-10,43;CL:0000221,3.29e-10,44;CL:0000133,3.29e-10,44;CL:0000540,2.55e-08,33;CL:0000047,2.55e-08,33;CL:0000031,2.55e-08,33;CL:0000404,2.55e-08,33;CL:0002613,1.01e-07,3;CL:0002608,1.88e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!2.09e-26!49;UBERON:0000033!2.38e-24!63;UBERON:0004121!2.16e-19!102;UBERON:0000924!2.16e-19!102;UBERON:0006601!2.16e-19!102;UBERON:0001017!3.17e-18!73;UBERON:0005743!3.17e-18!73;UBERON:0002616!4.68e-18!49;UBERON:0000955!1.79e-17!50;UBERON:0006238!1.79e-17!50;UBERON:0000073!2.27e-17!75;UBERON:0001016!2.27e-17!75;UBERON:0002346!3.86e-17!71;UBERON:0003075!3.86e-17!71;UBERON:0007284!3.86e-17!71;UBERON:0003080!1.21e-16!40;UBERON:0002780!1.01e-15!39;UBERON:0001890!1.01e-15!39;UBERON:0006240!1.01e-15!39;UBERON:0007811!4.41e-14!86;UBERON:0001049!1.18e-12!52;UBERON:0005068!1.18e-12!52;UBERON:0006241!1.18e-12!52;UBERON:0007135!1.18e-12!52;UBERON:0001894!1.97e-12!10;UBERON:0006222!1.97e-12!10;UBERON:0000970!7.03e-12!9;UBERON:0000019!7.03e-12!9;UBERON:0000047!7.03e-12!9;UBERON:0004088!7.03e-12!9;UBERON:0002104!7.03e-12!9;UBERON:0001456!7.03e-12!9;UBERON:0003072!7.03e-12!9;UBERON:0003071!7.03e-12!9;UBERON:0004128!7.03e-12!9;UBERON:0000153!9.35e-12!94;UBERON:0000007!2.05e-10!8;UBERON:0003296!2.05e-10!8;UBERON:0010133!2.05e-10!8;UBERON:0001444!3.37e-09!11;UBERON:0002420!3.89e-09!8;UBERON:0007245!3.89e-09!8;UBERON:0010009!3.89e-09!8;UBERON:0010011!3.89e-09!8;UBERON:0000454!3.89e-09!8;UBERON:0000020!3.36e-08!12;UBERON:0001032!3.36e-08!12;UBERON:0004456!3.36e-08!12;UBERON:0005085!2.31e-07!13;UBERON:0002791!4.87e-07!29;UBERON:0003528!4.87e-07!29;UBERON:0001893!4.87e-07!29;UBERON:0000369!7.39e-07!5;UBERON:0002435!7.39e-07!5;UBERON:0000204!7.39e-07!5;UBERON:0010082!7.39e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.84e-38,49;UBERON:0004121,3.59e-30,95;UBERON:0000924,3.59e-30,95;UBERON:0006601,3.59e-30,95;UBERON:0002346,1.13e-29,64;UBERON:0003075,1.13e-29,64;UBERON:0007284,1.13e-29,64;UBERON:0010371,3.90e-25,73;UBERON:0001894,1.16e-22,10;UBERON:0006222,1.16e-22,10;UBERON:0000970,1.38e-21,9;UBERON:0000019,1.38e-21,9;UBERON:0000047,1.38e-21,9;UBERON:0010312,1.38e-21,9;UBERON:0004088,1.38e-21,9;UBERON:0002104,1.38e-21,9;UBERON:0001456,1.38e-21,9;UBERON:0003072,1.38e-21,9;UBERON:0004128,1.38e-21,9;UBERON:0003071,1.38e-21,9;UBERON:0001017,2.39e-21,73;UBERON:0003080,4.07e-21,40;UBERON:0000073,4.54e-21,54;UBERON:0001016,1.35e-20,75;UBERON:0002616,1.29e-19,46;UBERON:0002780,1.47e-19,39;UBERON:0001890,1.47e-19,39;UBERON:0006240,1.47e-19,39;UBERON:0000955,4.40e-19,47;UBERON:0006238,4.40e-19,47;UBERON:0000007,9.67e-19,8;UBERON:0003296,9.67e-19,8;UBERON:0010133,9.67e-19,8;UBERON:0010314,1.81e-18,92;UBERON:0001444,2.57e-17,11;UBERON:0001049,9.84e-17,52;UBERON:0005068,9.84e-17,52;UBERON:0006241,9.84e-17,52;UBERON:0007135,9.84e-17,52;UBERON:0000020,1.02e-15,12;UBERON:0001032,1.02e-15,12;UBERON:0004456,1.02e-15,12;UBERON:0000033,2.32e-14,13;UBERON:0005085,2.32e-14,13;UBERON:0000369,7.51e-12,5;UBERON:0002435,7.51e-12,5;UBERON:0000204,7.51e-12,5;UBERON:0010082,7.51e-12,5;UBERON:0002420,7.03e-10,8;UBERON:0007245,7.03e-10,8;UBERON:0010009,7.03e-10,8;UBERON:0010011,7.03e-10,8;UBERON:0000454,7.03e-10,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,2.19686182734472,0.972149495371417,0.979904951377538,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0.103689612308478,0.270011876663381,0,0,0,2.32732518508413,7.47594673942244,2.75765635983006,1.10115880999389,1.91531007127782,2.4577045320999,4.08847491963601,5.94669683415663,6.25096044668112,0.558365998002762,1.12552522006336,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14560342750128,2.74500361691176,9.92669381691629,0.173824320192276,0.511430914660661,2.90903262383384,3.24482526135515,0,0,0,1.68353484709179,14.1831282829347,2.5289231487682,8.28285797104606,21.8521985861787,23.5406287063594,19.7295129238669,12.7434345401231,10.0894314588216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.29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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=492 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:86023259..86023303,+ | |||
|description=CAGE_peak_at_chr17:86023259..86023303,+ | |||
|id=chr17:86023259..86023303,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.59e-12!43;CL:0000221!1.89e-11!44;CL:0000133!1.89e-11!44;CL:0000117!1.42e-10!23;CL:0000337!1.42e-10!23;CL:0000055!4.08e-09!50;CL:0000540!2.06e-08!33;CL:0000047!2.06e-08!33;CL:0000031!2.06e-08!33;CL:0000404!2.06e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.99e-13,23;CL:0000337,3.99e-13,23;CL:0002319,1.56e-10,43;CL:0000221,3.29e-10,44;CL:0000133,3.29e-10,44;CL:0000540,2.55e-08,33;CL:0000047,2.55e-08,33;CL:0000031,2.55e-08,33;CL:0000404,2.55e-08,33;CL:0002613,1.01e-07,3;CL:0002608,1.88e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!2.09e-26!49;UBERON:0000033!2.38e-24!63;UBERON:0004121!2.16e-19!102;UBERON:0000924!2.16e-19!102;UBERON:0006601!2.16e-19!102;UBERON:0001017!3.17e-18!73;UBERON:0005743!3.17e-18!73;UBERON:0002616!4.68e-18!49;UBERON:0000955!1.79e-17!50;UBERON:0006238!1.79e-17!50;UBERON:0000073!2.27e-17!75;UBERON:0001016!2.27e-17!75;UBERON:0002346!3.86e-17!71;UBERON:0003075!3.86e-17!71;UBERON:0007284!3.86e-17!71;UBERON:0003080!1.21e-16!40;UBERON:0002780!1.01e-15!39;UBERON:0001890!1.01e-15!39;UBERON:0006240!1.01e-15!39;UBERON:0007811!4.41e-14!86;UBERON:0001049!1.18e-12!52;UBERON:0005068!1.18e-12!52;UBERON:0006241!1.18e-12!52;UBERON:0007135!1.18e-12!52;UBERON:0001894!1.97e-12!10;UBERON:0006222!1.97e-12!10;UBERON:0000970!7.03e-12!9;UBERON:0000019!7.03e-12!9;UBERON:0000047!7.03e-12!9;UBERON:0004088!7.03e-12!9;UBERON:0002104!7.03e-12!9;UBERON:0001456!7.03e-12!9;UBERON:0003072!7.03e-12!9;UBERON:0003071!7.03e-12!9;UBERON:0004128!7.03e-12!9;UBERON:0000153!9.35e-12!94;UBERON:0000007!2.05e-10!8;UBERON:0003296!2.05e-10!8;UBERON:0010133!2.05e-10!8;UBERON:0001444!3.37e-09!11;UBERON:0002420!3.89e-09!8;UBERON:0007245!3.89e-09!8;UBERON:0010009!3.89e-09!8;UBERON:0010011!3.89e-09!8;UBERON:0000454!3.89e-09!8;UBERON:0000020!3.36e-08!12;UBERON:0001032!3.36e-08!12;UBERON:0004456!3.36e-08!12;UBERON:0005085!2.31e-07!13;UBERON:0002791!4.87e-07!29;UBERON:0003528!4.87e-07!29;UBERON:0001893!4.87e-07!29;UBERON:0000369!7.39e-07!5;UBERON:0002435!7.39e-07!5;UBERON:0000204!7.39e-07!5;UBERON:0010082!7.39e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.84e-38,49;UBERON:0004121,3.59e-30,95;UBERON:0000924,3.59e-30,95;UBERON:0006601,3.59e-30,95;UBERON:0002346,1.13e-29,64;UBERON:0003075,1.13e-29,64;UBERON:0007284,1.13e-29,64;UBERON:0010371,3.90e-25,73;UBERON:0001894,1.16e-22,10;UBERON:0006222,1.16e-22,10;UBERON:0000970,1.38e-21,9;UBERON:0000019,1.38e-21,9;UBERON:0000047,1.38e-21,9;UBERON:0010312,1.38e-21,9;UBERON:0004088,1.38e-21,9;UBERON:0002104,1.38e-21,9;UBERON:0001456,1.38e-21,9;UBERON:0003072,1.38e-21,9;UBERON:0004128,1.38e-21,9;UBERON:0003071,1.38e-21,9;UBERON:0001017,2.39e-21,73;UBERON:0003080,4.07e-21,40;UBERON:0000073,4.54e-21,54;UBERON:0001016,1.35e-20,75;UBERON:0002616,1.29e-19,46;UBERON:0002780,1.47e-19,39;UBERON:0001890,1.47e-19,39;UBERON:0006240,1.47e-19,39;UBERON:0000955,4.40e-19,47;UBERON:0006238,4.40e-19,47;UBERON:0000007,9.67e-19,8;UBERON:0003296,9.67e-19,8;UBERON:0010133,9.67e-19,8;UBERON:0010314,1.81e-18,92;UBERON:0001444,2.57e-17,11;UBERON:0001049,9.84e-17,52;UBERON:0005068,9.84e-17,52;UBERON:0006241,9.84e-17,52;UBERON:0007135,9.84e-17,52;UBERON:0000020,1.02e-15,12;UBERON:0001032,1.02e-15,12;UBERON:0004456,1.02e-15,12;UBERON:0000033,2.32e-14,13;UBERON:0005085,2.32e-14,13;UBERON:0000369,7.51e-12,5;UBERON:0002435,7.51e-12,5;UBERON:0000204,7.51e-12,5;UBERON:0010082,7.51e-12,5;UBERON:0002420,7.03e-10,8;UBERON:0007245,7.03e-10,8;UBERON:0010009,7.03e-10,8;UBERON:0010011,7.03e-10,8;UBERON:0000454,7.03e-10,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,2.19686182734472,0.972149495371417,0.979904951377538,1.43752564364972,0,0,0,0,0,0,1.41621522601718,1.5869729378161,1.26766280701236,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0.103689612308478,0.270011876663381,0,0,0,2.32732518508413,7.47594673942244,2.75765635983006,1.10115880999389,1.91531007127782,2.4577045320999,4.08847491963601,5.94669683415663,6.25096044668112,0.558365998002762,1.12552522006336,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14560342750128,2.74500361691176,9.92669381691629,0.173824320192276,0.511430914660661,2.90903262383384,3.24482526135515,0,0,0,1.68353484709179,14.1831282829347,2.5289231487682,8.28285797104606,21.8521985861787,23.5406287063594,19.7295129238669,12.7434345401231,10.0894314588216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0,0,0.292255857911312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44703369206061,8.10274923140896,12.6771510107099,6.85878512101095,7.27094957933322,6.95638388648075,5.10101963866575,7.91608867697958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.729320151204882,0,0.551530525350042,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.448176066834085,0.34461281373368,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0,0.685738504770831,0.177475806159338,0,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,1.24905288968973,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:86023259..86023303,+ | |||
}} |
Latest revision as of 10:49, 5 August 2015
Short description: | p@chr17:86023259..86023303, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:86023259..86023303, + |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.99e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.99e-13 | 23 |
neural cell | 1.56e-10 | 43 |
ectodermal cell | 3.29e-10 | 44 |
neurectodermal cell | 3.29e-10 | 44 |
neuron | 2.55e-08 | 33 |
neuronal stem cell | 2.55e-08 | 33 |
neuroblast | 2.55e-08 | 33 |
electrically signaling cell | 2.55e-08 | 33 |
striatum neuron | 1.01e-07 | 3 |
hippocampal neuron | 1.88e-07 | 3 |