FFCP PHASE1:Mm9::chr15:75397327..75397339,-: Difference between revisions
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{{FFCP|EntrezGene=23934|HGNC=|MCL_coexpression_id=87|UniProt=E9Q383|association_with_transcript=-38bp_to_ENSMUST00000065417_5end|description=CAGE_peak_6_at_Ly6h_5end|id=chr15:75397327..75397339,-|ontology_enrichment_celltype=CL:0000117!1.66e-17!23;CL:0000337!1.66e-17!23;CL:0000540!4.15e-14!33;CL:0000047!4.15e-14!33;CL:0000031!4.15e-14!33;CL:0000404!4.15e-14!33;CL:0000221!1.88e-10!44;CL:0000133!1.88e-10!44;CL:0000393!3.34e-10!39;CL:0000211!3.34e-10!39;CL:0002319!3.42e-10!43;CL:0000055!2.98e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.82e-37,23;CL:0000337,6.82e-37,23;CL:0000540,8.32e-24,33;CL:0000047,8.32e-24,33;CL:0000031,8.32e-24,33;CL:0000404,8.32e-24,33;CL:0000393,3.42e-19,39;CL:0000211,3.42e-19,39;CL:0002319,1.00e-18,43;CL:0000221,3.73e-18,44;CL:0000133,3.73e-18,44;CL:0002609,2.64e-10,6;CL:0002321,3.96e-09,70;CL:0002612,2.32e-07,3;CL:0000120,3.35e-07,3;CL:0002613,7.82e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.32e-27!73;UBERON:0005743!2.32e-27!73;UBERON:0000073!5.90e-26!75;UBERON:0001016!5.90e-26!75;UBERON:0001049!1.25e-25!52;UBERON:0005068!1.25e-25!52;UBERON:0006241!1.25e-25!52;UBERON:0007135!1.25e-25!52;UBERON:0003056!2.75e-25!49;UBERON:0002346!4.22e-25!71;UBERON:0003075!4.22e-25!71;UBERON:0007284!4.22e-25!71;UBERON:0003080!1.89e-23!40;UBERON:0000033!3.51e-23!63;UBERON:0002780!6.45e-23!39;UBERON:0001890!6.45e-23!39;UBERON:0006240!6.45e-23!39;UBERON:0004121!2.28e-22!102;UBERON:0000924!2.28e-22!102;UBERON:0006601!2.28e-22!102;UBERON:0000955!1.25e-21!50;UBERON:0006238!1.25e-21!50;UBERON:0002020!1.49e-21!34;UBERON:0002616!4.69e-21!49;UBERON:0002791!6.14e-17!29;UBERON:0003528!6.14e-17!29;UBERON:0001893!6.14e-17!29;UBERON:0007811!1.41e-12!86;UBERON:0000956!2.23e-12!21;UBERON:0001869!2.23e-12!21;UBERON:0000203!2.23e-12!21;UBERON:0000153!5.01e-11!94;UBERON:0002619!9.60e-10!17;UBERON:0002021!2.89e-08!10;UBERON:0000411!2.89e-08!10;UBERON:0001950!2.89e-08!10;UBERON:0001894!6.90e-07!10;UBERON:0006222!6.90e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.46e-47,54;UBERON:0002020,1.25e-44,34;UBERON:0001049,6.97e-44,52;UBERON:0005068,6.97e-44,52;UBERON:0006241,6.97e-44,52;UBERON:0007135,6.97e-44,52;UBERON:0002780,2.37e-43,39;UBERON:0001890,2.37e-43,39;UBERON:0006240,2.37e-43,39;UBERON:0003080,4.72e-42,40;UBERON:0001017,2.58e-41,73;UBERON:0001016,6.17e-40,75;UBERON:0002616,1.92e-35,46;UBERON:0003528,1.32e-34,29;UBERON:0002791,1.32e-34,29;UBERON:0001893,1.32e-34,29;UBERON:0000955,1.66e-34,47;UBERON:0006238,1.66e-34,47;UBERON:0002346,7.42e-34,64;UBERON:0003075,7.42e-34,64;UBERON:0007284,7.42e-34,64;UBERON:0003056,9.56e-33,49;UBERON:0004121,2.43e-29,95;UBERON:0000924,2.43e-29,95;UBERON:0006601,2.43e-29,95;UBERON:0010371,1.69e-28,73;UBERON:0000956,5.29e-24,21;UBERON:0001869,5.29e-24,21;UBERON:0000203,5.29e-24,21;UBERON:0010314,1.22e-20,92;UBERON:0002619,2.41e-18,17;UBERON:0000025,7.98e-15,114;UBERON:0002021,1.70e-13,10;UBERON:0000411,1.70e-13,10;UBERON:0001950,1.70e-13,10;UBERON:0004111,3.10e-13,122;UBERON:0002420,1.80e-11,8;UBERON:0007245,1.80e-11,8;UBERON:0010009,1.80e-11,8;UBERON:0010011,1.80e-11,8;UBERON:0000454,1.80e-11,8;UBERON:0001948,3.17e-11,5;UBERON:0002315,3.17e-11,5;UBERON:0001894,2.74e-09,10;UBERON:0006222,2.74e-09,10;UBERON:0002240,3.04e-09,6;UBERON:0005174,3.04e-09,6;UBERON:0001137,3.04e-09,6;UBERON:0011216,5.07e-09,194;UBERON:0002257,2.32e-07,3;UBERON:0000007,5.98e-07,8;UBERON:0003296,5.98e-07,8;UBERON:0010133,5.98e-07,8;UBERON:0000369,6.98e-07,5;UBERON:0002435,6.98e-07,5;UBERON:0000204,6.98e-07,5;UBERON:0010082,6.98e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28339259094552,8.99284664762456,6.97214543856797,0,0,0,0,0,0.599200221036809,3.84218305321555,1.65903379693564,2.97013064329719,1.68259969081106,9.99778445413313,9.27647871996777,3.1847607795888,1.15014565221884,3.67687514644008,0,1.65993539510744,1.68967186581868,5.14356522147756,5.48925861614458,3.64639359389732,2.51264699101243,3.37657566019008,2.59757021220577,10.3120004915784,7.11858403995515,9.50637173709033,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,5.6544458450789,1.39059456153821,1.27857728665165,1.24672826735736,1.29793010454206,0.81471491080253,0,0,0.210441855886474,0.130120442962704,0.689706313300419,0.180062129805349,0.150704817835715,0.748401490664606,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.52347938276953,4.01327988279209,0,0,0,0.232236671860439,0,0,0.444756087689741,0.570676878337677,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.569003702859245,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=23934 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q383 | |||
|association_with_transcript=-38bp_to_ENSMUST00000065417_5end | |||
|cluster_id=chr15:75397327..75397339,- | |||
|description=CAGE_peak_6_at_Ly6h_5end | |||
|id=chr15:75397327..75397339,- | |||
|ontology_enrichment_celltype=CL:0000117!1.66e-17!23;CL:0000337!1.66e-17!23;CL:0000540!4.15e-14!33;CL:0000047!4.15e-14!33;CL:0000031!4.15e-14!33;CL:0000404!4.15e-14!33;CL:0000221!1.88e-10!44;CL:0000133!1.88e-10!44;CL:0000393!3.34e-10!39;CL:0000211!3.34e-10!39;CL:0002319!3.42e-10!43;CL:0000055!2.98e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.82e-37,23;CL:0000337,6.82e-37,23;CL:0000540,8.32e-24,33;CL:0000047,8.32e-24,33;CL:0000031,8.32e-24,33;CL:0000404,8.32e-24,33;CL:0000393,3.42e-19,39;CL:0000211,3.42e-19,39;CL:0002319,1.00e-18,43;CL:0000221,3.73e-18,44;CL:0000133,3.73e-18,44;CL:0002609,2.64e-10,6;CL:0002321,3.96e-09,70;CL:0002612,2.32e-07,3;CL:0000120,3.35e-07,3;CL:0002613,7.82e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.32e-27!73;UBERON:0005743!2.32e-27!73;UBERON:0000073!5.90e-26!75;UBERON:0001016!5.90e-26!75;UBERON:0001049!1.25e-25!52;UBERON:0005068!1.25e-25!52;UBERON:0006241!1.25e-25!52;UBERON:0007135!1.25e-25!52;UBERON:0003056!2.75e-25!49;UBERON:0002346!4.22e-25!71;UBERON:0003075!4.22e-25!71;UBERON:0007284!4.22e-25!71;UBERON:0003080!1.89e-23!40;UBERON:0000033!3.51e-23!63;UBERON:0002780!6.45e-23!39;UBERON:0001890!6.45e-23!39;UBERON:0006240!6.45e-23!39;UBERON:0004121!2.28e-22!102;UBERON:0000924!2.28e-22!102;UBERON:0006601!2.28e-22!102;UBERON:0000955!1.25e-21!50;UBERON:0006238!1.25e-21!50;UBERON:0002020!1.49e-21!34;UBERON:0002616!4.69e-21!49;UBERON:0002791!6.14e-17!29;UBERON:0003528!6.14e-17!29;UBERON:0001893!6.14e-17!29;UBERON:0007811!1.41e-12!86;UBERON:0000956!2.23e-12!21;UBERON:0001869!2.23e-12!21;UBERON:0000203!2.23e-12!21;UBERON:0000153!5.01e-11!94;UBERON:0002619!9.60e-10!17;UBERON:0002021!2.89e-08!10;UBERON:0000411!2.89e-08!10;UBERON:0001950!2.89e-08!10;UBERON:0001894!6.90e-07!10;UBERON:0006222!6.90e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.46e-47,54;UBERON:0002020,1.25e-44,34;UBERON:0001049,6.97e-44,52;UBERON:0005068,6.97e-44,52;UBERON:0006241,6.97e-44,52;UBERON:0007135,6.97e-44,52;UBERON:0002780,2.37e-43,39;UBERON:0001890,2.37e-43,39;UBERON:0006240,2.37e-43,39;UBERON:0003080,4.72e-42,40;UBERON:0001017,2.58e-41,73;UBERON:0001016,6.17e-40,75;UBERON:0002616,1.92e-35,46;UBERON:0003528,1.32e-34,29;UBERON:0002791,1.32e-34,29;UBERON:0001893,1.32e-34,29;UBERON:0000955,1.66e-34,47;UBERON:0006238,1.66e-34,47;UBERON:0002346,7.42e-34,64;UBERON:0003075,7.42e-34,64;UBERON:0007284,7.42e-34,64;UBERON:0003056,9.56e-33,49;UBERON:0004121,2.43e-29,95;UBERON:0000924,2.43e-29,95;UBERON:0006601,2.43e-29,95;UBERON:0010371,1.69e-28,73;UBERON:0000956,5.29e-24,21;UBERON:0001869,5.29e-24,21;UBERON:0000203,5.29e-24,21;UBERON:0010314,1.22e-20,92;UBERON:0002619,2.41e-18,17;UBERON:0000025,7.98e-15,114;UBERON:0002021,1.70e-13,10;UBERON:0000411,1.70e-13,10;UBERON:0001950,1.70e-13,10;UBERON:0004111,3.10e-13,122;UBERON:0002420,1.80e-11,8;UBERON:0007245,1.80e-11,8;UBERON:0010009,1.80e-11,8;UBERON:0010011,1.80e-11,8;UBERON:0000454,1.80e-11,8;UBERON:0001948,3.17e-11,5;UBERON:0002315,3.17e-11,5;UBERON:0001894,2.74e-09,10;UBERON:0006222,2.74e-09,10;UBERON:0002240,3.04e-09,6;UBERON:0005174,3.04e-09,6;UBERON:0001137,3.04e-09,6;UBERON:0011216,5.07e-09,194;UBERON:0002257,2.32e-07,3;UBERON:0000007,5.98e-07,8;UBERON:0003296,5.98e-07,8;UBERON:0010133,5.98e-07,8;UBERON:0000369,6.98e-07,5;UBERON:0002435,6.98e-07,5;UBERON:0000204,6.98e-07,5;UBERON:0010082,6.98e-07,5 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28339259094552,8.99284664762456,6.97214543856797,0,0,0,0,0,0.599200221036809,3.84218305321555,1.65903379693564,2.97013064329719,1.68259969081106,9.99778445413313,9.27647871996777,3.1847607795888,1.15014565221884,3.67687514644008,0,1.65993539510744,1.68967186581868,5.14356522147756,5.48925861614458,3.64639359389732,2.51264699101243,3.37657566019008,2.59757021220577,10.3120004915784,7.11858403995515,9.50637173709033,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748953197024114,0,5.6544458450789,1.39059456153821,1.27857728665165,1.24672826735736,1.29793010454206,0.81471491080253,0,0,0.210441855886474,0.130120442962704,0.689706313300419,0.180062129805349,0.150704817835715,0.748401490664606,0.512454881139399,0.562210347358373,0.258703370739016,0,0,0,0.219195732427575,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,2.52347938276953,4.01327988279209,0,0,0,0.232236671860439,0,0,0.444756087689741,0.570676878337677,0,0.329397909448022,0,0,0.19496408711912,0,0,0,0.569003702859245,0,0,0,0.193952487167626,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.35163505977661,0,0,0.631016438832513,0,0,0,0,0.283076530788832,0,0.584511715822624,0.395287777946524,0.963963949265421,0.141940085208269,1.78065603667255,0.977321756121456,0,0,0.728341908464944,0.302323556964751,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,1.16422815404479,1.07168517515796,1.41872186913819,1.96205699362278,2.13913726782757,2.43571959291679,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,0,0,0,0,0,0,0.205421914329655,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,2.82375921308533,4.14292712856459,1.14579102687879,3.95262319390481,0.685082519770642,2.2661816921691,2.70009000092722,2.70192721934532,1.35942722695261,3.10656187051092,0.103787347584177,0,0.682934423016537,0.243106717068294,0.419226325255965,1.10306105070008,1.33348036680969,0.618105171716683,0.64183841918363,1.01078884705519,0.50695859978048,0.565879024158229,0.749132059759059,0.640251524048693,0.459483751644906,0.476293691283074,0.463537303779422,0.964546102318525,0,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.282328141245992,0.507687647350059,0.548783918618318,0.526139422875686,0.950628796921032,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.619747364743864,0.192906610981141,1.99848462350357,0.233931608445408,0.429742108096597,0.956441660344217,0,0 | |||
|short_description=p6@Ly6h | |||
}} |
Latest revision as of 23:49, 26 September 2015
Short description: | p6@Ly6h |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ly6h_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | -38bp_to_ENSMUST00000065417_5end |
EntrezGene: | Ly6h |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.82e-37 | 23 |
neuroblast (sensu Vertebrata) | 6.82e-37 | 23 |
neuron | 8.32e-24 | 33 |
neuronal stem cell | 8.32e-24 | 33 |
neuroblast | 8.32e-24 | 33 |
electrically signaling cell | 8.32e-24 | 33 |
electrically responsive cell | 3.42e-19 | 39 |
electrically active cell | 3.42e-19 | 39 |
neural cell | 1.00e-18 | 43 |
ectodermal cell | 3.73e-18 | 44 |
neurectodermal cell | 3.73e-18 | 44 |
neuron of cerebral cortex | 2.64e-10 | 6 |
embryonic cell | 3.96e-09 | 70 |
neuron of the ventral spinal cord | 2.32e-07 | 3 |
granule cell | 3.35e-07 | 3 |
striatum neuron | 7.82e-07 | 3 |