FFCP PHASE1:Hg19::chrX:105066524..105066552,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:105066524..105066552,+
|short_description=p1@NRK
|description=CAGE_peak_1_at_NRK_5end
|association_with_transcript=0bp_to_ENST00000243300,ENST00000428173,N...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203447 | |EntrezGene=203447 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25391 | |HGNC=25391 | ||
|TSSclassifier=strong | |||
|UniProt=F5H049,Q7Z2Y5 | |UniProt=F5H049,Q7Z2Y5 | ||
|association_with_transcript=0bp_to_ENST00000243300,ENST00000428173,NM_198465,uc004emd.2,uc010npc.1_5end | |||
|cluster_id=chrX:105066524..105066552,+ | |||
|coexpression_cluster_id=C1194 | |||
|description=CAGE_peak_1_at_NRK_5end | |||
|id=chrX:105066524..105066552,+ | |||
|ontology_enrichment_celltype=CL:1000449!3.53e-10!16;CL:0000183!1.70e-08!59;CL:1000497!2.69e-08!18;CL:0002518!2.69e-08!18;CL:1000507!2.83e-08!12;CL:1000494!2.83e-08!12;CL:0002681!4.71e-08!13;CL:0002584!4.71e-08!13;CL:0000393!4.95e-08!60;CL:0000211!4.95e-08!60;CL:0000187!3.38e-07!54;CL:0000680!4.22e-07!57;CL:0000056!4.22e-07!57;CL:0000355!4.22e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:1000449;3.59e-11;15!CL:1000507;9.14e-10;10!CL:1000494;9.14e-10;10!CL:1000497;2.58e-09;17!CL:0002518;2.58e-09;17!CL:0002681;2.11e-08;12!CL:0002584;2.11e-08;12!CL:0000188;3.00e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,4.02e-11,15;CL:1000507,9.36e-10,10;CL:1000494,9.36e-10,10;CL:1000497,2.84e-09,17;CL:0002518,2.84e-09,17;CL:0002681,2.33e-08,12;CL:0002584,2.33e-08,12;CL:0000393,3.40e-08,61;CL:0000211,3.40e-08,61;CL:0000187,6.72e-08,55;CL:0000680,1.44e-07,58;CL:0000056,1.44e-07,58;CL:0000355,1.44e-07,58;CL:0000188,3.15e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!8.30e-15!143;UBERON:0003103!1.20e-14!69;UBERON:0000481!1.55e-14!347;UBERON:0002553!1.04e-12!70;UBERON:0003886!1.77e-12!63;UBERON:0000119!2.35e-12!312;UBERON:0000483!4.05e-12!309;UBERON:0002100!1.35e-11!216;UBERON:0000080!3.46e-11!18;UBERON:0002120!3.46e-11!18;UBERON:0004875!3.46e-11!18;UBERON:0005721!3.46e-11!18;UBERON:0005754!3.46e-11!18;UBERON:0007297!3.46e-11!18;UBERON:0006555!7.15e-11!17;UBERON:0005103!7.15e-11!17;UBERON:0000083!7.15e-11!17;UBERON:0009201!7.15e-11!17;UBERON:0004819!7.15e-11!17;UBERON:0006553!7.15e-11!17;UBERON:0003074!7.15e-11!17;UBERON:0003060!7.15e-11!17;UBERON:0004876!9.79e-11!20;UBERON:0004211!3.53e-10!16;UBERON:0001285!3.53e-10!16;UBERON:0007684!3.53e-10!16;UBERON:0003220!3.53e-10!16;UBERON:0004208!3.53e-10!16;UBERON:0000914!3.63e-10!83;UBERON:0002329!3.63e-10!83;UBERON:0003077!3.63e-10!83;UBERON:0003059!3.63e-10!83;UBERON:0007282!3.63e-10!83;UBERON:0009618!3.63e-10!83;UBERON:0007285!3.63e-10!83;UBERON:0000464!4.20e-10!104;UBERON:0003887!4.42e-10!21;UBERON:0000468!8.99e-10!659;UBERON:0003104!4.13e-09!238;UBERON:0009142!4.13e-09!238;UBERON:0000058!5.76e-09!26;UBERON:0000466!8.01e-09!126;UBERON:0004290!9.99e-09!70;UBERON:0002385!1.36e-08!63;UBERON:0001015!1.36e-08!63;UBERON:0000383!1.36e-08!63;UBERON:0000064!1.39e-08!219;UBERON:0000475!1.41e-08!365;UBERON:0001134!2.74e-08!61;UBERON:0002036!2.74e-08!61;UBERON:0003082!2.74e-08!61;UBERON:0009773!2.83e-08!12;UBERON:0001231!2.83e-08!12;UBERON:0004810!2.83e-08!12;UBERON:0000922!3.01e-08!612;UBERON:0001225!4.71e-08!13;UBERON:0008987!4.71e-08!13;UBERON:0000353!7.35e-08!17;UBERON:0003064!8.61e-08!37;UBERON:0003914!1.28e-07!118;UBERON:0007100!1.39e-07!27;UBERON:0000489!1.62e-07!32;UBERON:0000486!2.25e-07!82;UBERON:0005631!3.69e-07!14;UBERON:0000158!3.69e-07!14;UBERON:0002113!4.80e-07!27;UBERON:0003918!4.80e-07!27;UBERON:0005095!4.80e-07!27;UBERON:0007687!4.80e-07!27;UBERON:0001851!5.19e-07!16;UBERON:0002417!5.52e-07!61;UBERON:0000916!5.52e-07!61;UBERON:0004923!7.15e-07!57;UBERON:0009569!7.70e-07!113;UBERON:0002050!8.42e-07!605;UBERON:0005423!8.42e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;3.59e-11;15!UBERON:0004819;3.59e-11;15!UBERON:0001285;3.59e-11;15!UBERON:0007684;3.59e-11;15!UBERON:0004211;9.14e-10;10!UBERON:0009773;9.14e-10;10!UBERON:0001231;9.14e-10;10!UBERON:0004810;9.14e-10;10!UBERON:0001225;2.11e-08;12!UBERON:0008987;2.11e-08;12!UBERON:0007100;3.40e-08;25!UBERON:0003135;7.42e-08;11!UBERON:0001851;1.20e-07;15!UBERON:0002113;1.59e-07;24!UBERON:0011143;1.59e-07;24!UBERON:0000353;2.43e-07;15!UBERON:0000473;2.55e-07;8!UBERON:0003103;2.65e-07;61!UBERON:0007625;3.45e-07;11!UBERON:0000489;4.14e-07;29!UBERON:0000948;9.95e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,3.31e-16,68;UBERON:0003104,8.34e-16,160;UBERON:0009142,8.34e-16,160;UBERON:0006555,4.98e-12,16;UBERON:0004819,4.98e-12,16;UBERON:0007503,2.51e-11,78;UBERON:0004211,4.02e-11,15;UBERON:0009773,4.02e-11,15;UBERON:0001231,4.02e-11,15;UBERON:0001285,4.02e-11,15;UBERON:0007684,4.02e-11,15;UBERON:0004208,4.02e-11,15;UBERON:0005256,2.56e-10,122;UBERON:0002100,4.89e-10,199;UBERON:0004810,9.36e-10,10;UBERON:0002329,7.52e-09,71;UBERON:0003059,7.52e-09,71;UBERON:0007282,7.52e-09,71;UBERON:0004290,7.52e-09,71;UBERON:0009618,7.52e-09,71;UBERON:0002113,1.17e-08,26;UBERON:0003918,1.17e-08,26;UBERON:0011143,1.17e-08,26;UBERON:0005095,1.17e-08,26;UBERON:0007687,1.17e-08,26;UBERON:0003077,1.40e-08,72;UBERON:0007285,1.40e-08,72;UBERON:0005631,2.07e-08,14;UBERON:0000158,2.07e-08,14;UBERON:0001225,2.33e-08,12;UBERON:0008987,2.33e-08,12;UBERON:0007524,2.56e-08,73;UBERON:0002385,2.93e-08,64;UBERON:0001015,2.93e-08,64;UBERON:0000383,2.93e-08,64;UBERON:0007100,3.11e-08,27;UBERON:0001134,3.17e-08,62;UBERON:0002036,3.17e-08,62;UBERON:0003082,3.17e-08,62;UBERON:0000489,3.70e-08,31;UBERON:0002417,4.41e-08,60;UBERON:0000916,4.41e-08,60;UBERON:0003135,6.65e-08,11;UBERON:0001851,1.31e-07,15;UBERON:0000473,2.25e-07,8;UBERON:0000119,2.31e-07,309;UBERON:0003886,2.33e-07,54;UBERON:0000922,2.50e-07,592;UBERON:0000353,2.62e-07,15;UBERON:0001048,3.19e-07,160;UBERON:0002553,3.52e-07,61;UBERON:0007625,3.53e-07,11;UBERON:0009569,3.77e-07,112;UBERON:0000483,4.30e-07,306;UBERON:0000486,5.03e-07,83;UBERON:0000948,8.71e-07,24;UBERON:0005498,8.71e-07,24;UBERON:0004140,8.71e-07,24;UBERON:0009881,8.71e-07,24;UBERON:0004141,8.71e-07,24;UBERON:0003084,8.71e-07,24;UBERON:0007005,8.71e-07,24;UBERON:0004139,8.71e-07,24;UBERON:0004291,8.71e-07,24 | |||
|phase1_expression=3.45188920614058,0.428201047781966,2.67813367782345,32.0234554730017,0.446961094427288,5.23403114460221,0,0.631719873426831,0,20.3959167296252,13.9560233594486,17.9121925146741,2.63766978228454,6.43585035392242,7.29074226601415,0,0,1.46062018077475,0,1.84681587115182,0.816002764977012,0,2.0036519099174,2.73748850145768,0.376627918784408,0,0,0,0,0,3.09632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,43.5955558807363,14.0648818027883,0,0,0,0,0.973269740605272,4.34860158954712,11.9733874629785,6.0606002128257,3.92937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,1.20848795132744,0,0.732186172644509,0,0,0.535798369704479,0,0.450445921933289,0,0.949265659568129,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0.860509862246441,0,34.2013336086807,5.33744978648525,0.49333509683432,34.2332138939743,1.75123873690594,11.6057951210556,0.151357427644931,0,0.937285727335186,0,0,0.149448680551801,5.40198693761318,2.10434827678571,2.66856532734272,0.204154171254893,7.49289335601785,0,0,0,0.910161361938026,0.718618141816238,6.39677233025452,6.50616303334214,0.831192346452549,0,0,0,5.44474479168101,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.484938170456436,0,0,0,0.386521706326594,0,1.43402297694502,1.34171076742555,0.662648841607426,0.813357600086629,3.10983165046111,2.01856680700503,0,3.12899064659632,2.57296375277154,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,1.2347220339942,17.641045366265,0,0,1.18157981336281,0,0.122988438543114,9.09309394582185,5.37776398502265,0,0.100528972411631,0.833296006426766,0.651616610620649,0,4.3299402607582,0.927443239800615,4.69634776943287,0.288732895522148,0,0,0,0,0,0,0,5.62403003920662,0.16798212819886,1.55952606966625,0.53735113621709,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,1.79409734952577,0,1.68678057388185,0.517086863031111,3.57656445851882,0.845302752556,0.26593811658487,0,12.0887465903207,7.09245660116391,11.4561536976923,6.14805372730035,0.542621605391443,3.29296134712308,0.977208552881205,2.13235169245527,0,5.72734816413214,2.61460037580088,5.49851451501314,0,0,0,0.239624855491583,0,0,1.01346914667305,0,0.179060963239896,0,0,0,0,0.508189248444927,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,4.17151071845076,7.00238729483548,6.51036056879365,3.95144636908534,18.0213278685133,39.4256037584837,1.05427273493442,1.20378439891088,0,5.17365356462525,5.97803038681893,3.31864503375066,0.0868836144680828,0.979005787313703,2.05886054286514,0,0,0,1.21251028578504,4.99306318531491,1.20956117331872,2.23297027036899,4.14347327877769,0.280660094433074,2.81906128362542,26.0970697024019,1.44768529029247,5.93672265779964,0.154209693802656,0,0.0821271560138091,0,0.348631135379878,0,0.40101294060657,0,0,0,0,6.31679458070376,20.4090643326699,29.8052912287205,23.3822759445217,24.3824262742543,1.13733384070897,0.170093705276516,34.114714744138,4.62681758070868,11.6506968143857,9.03041592938736,12.2340611061618,5.81753206250107,15.4473580758303,0,0,4.61610225209501,12.7925711822885,3.25378394664303,37.6099692514186,0,0,0,0,9.64103579064957,3.0934629853479,21.5668063960502,17.806426268231,24.672746474731,25.8882790132539,21.7525040871343,27.6986539102328,13.7999655252443,0,0,0.255225424989168,0,0,0.62962469366128,0,0.616067160352178,0,0,0.37064843820784,0.715624433709956,5.95453390975468,14.2370741123427,12.9628531868201,8.44462711327402,54.3482514803079,0,0,28.0601033829971,23.6101845573007,20.6171704104951,0,1.58510321173008,0,52.1768100825862,0.731140468893853,0,0.136499911407986,1.83827061539827,0,0,0.66343897524122,9.20746859032902,10.9967351510671,22.3004215695855,0,1.54911749049875,0,12.9070216983646,4.32295780457733,0,0.709522128141196,0.211107635297664,0,3.03578539012572,0.349934720244983,0,0,0,38.3165269161491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51619630252546,0,0,0,12.6534576910976,38.605408508243,14.4365529986639,0,0,0,0,0,5.18044769452781,3.86797481743607,0,0,0,4.66559381492711,0,0,0,2.17015492401254,0,0,0,0,0,0.7812832832557,39.3569999982881,0.724999575434793,0,0.762760950878299,0,0.344743373241465,0,0,0.885741385813839,0,3.05163472634166,0.110579259931225,0,0.219385397153973,0,0,4.61701551022782,0.341826167541004,0.922255617552241,0,0,22.0110800215024,29.8608154490071,54.3695471539007,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.530745387020035,9.77648231893801,0,0,0,0.539209063845416,201.446989471996,0.234264445725339,0,0,0,7.10251925128903,10.8891644443797,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,22.0155601984958,0,0,0,0,2.13375836274523,0,4.51961481561065,0,0,0,0.195551382734803,0,4.90941887900511,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,2.14882720709979,0,12.5677080572514,8.24977526442061,2.15361907373044,10.3833080259475,3.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| ||
|short_description=p1@NRK | |||
}} | }} |
Latest revision as of 21:43, 18 September 2015
Short description: | p1@NRK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NRK_5end |
Coexpression cluster: | C1194_skeletal_large_diaphragm_throat_trachea_testicular_tongue |
Association with transcript: | 0bp_to_ENST00000243300, ENST00000428173, NM_198465, uc004emd.2, uc010npc.1_5end |
EntrezGene: | NRK |
HGNC: | 25391 |
UniProt: | F5H049Q7Z2Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 4.02e-11 | 15 |
kidney tubule cell | 9.36e-10 | 10 |
nephron tubule epithelial cell | 9.36e-10 | 10 |
kidney cell | 2.84e-09 | 17 |
kidney epithelial cell | 2.84e-09 | 17 |
kidney cortical cell | 2.33e-08 | 12 |
renal cortical epithelial cell | 2.33e-08 | 12 |
electrically responsive cell | 3.40e-08 | 61 |
electrically active cell | 3.40e-08 | 61 |
muscle cell | 6.72e-08 | 55 |
muscle precursor cell | 1.44e-07 | 58 |
myoblast | 1.44e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.44e-07 | 58 |
cell of skeletal muscle | 3.15e-07 | 9 |