FFCP PHASE1:Hg19::chr4:1167293..1167308,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=strong | |||
|UniProt=D6RB12,Q9BUD6 | |||
|association_with_transcript=-294bp_to_ENST00000503765,NM_001128325_5end | |||
|cluster_id=chr4:1167293..1167308,- | |||
|description=CAGE_peak_18_at_SPON2_5end | |||
|id=chr4:1167293..1167308,- | |||
|ontology_enrichment_celltype=CL:0002504!3.37e-07!3;CL:1000279!3.37e-07!3;CL:1000280!3.37e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002504;5.13e-24;3!CL:1000279;5.13e-24;3!CL:1000280;5.13e-24;3!CL:0002367;4.07e-16;2!CL:0000134;8.71e-10;55!CL:0002568;2.70e-09;1!CL:0002599;6.46e-09;1!CL:0000048;5.57e-08;58!CL:0000034;2.98e-07;69!CL:0002537;5.64e-07;5!CL:0000349;9.95e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002504,3.62e-24,3;CL:1000279,3.62e-24,3;CL:1000280,3.62e-24,3;CL:0002367,3.77e-16,2;CL:0002568,2.60e-09,1;CL:0002599,5.31e-09,1;CL:0002537,8.10e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;4.07e-16;2!UBERON:0003956;4.07e-16;2!UBERON:0002079;6.46e-09;1!UBERON:0001155;2.29e-08;9!UBERON:0005409;3.11e-08;22!UBERON:0004921;2.37e-07;33!UBERON:0000160;4.54e-07;17!UBERON:0000059;6.31e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.77e-16,2;UBERON:0003956,3.77e-16,2;UBERON:0002079,6.22e-09,1;UBERON:0001155,2.04e-08,9;UBERON:0005409,2.57e-07,25;UBERON:0000160,3.99e-07,17;UBERON:0000059,5.76e-07,11 | |||
|phase1_expression=2.90685406832891,0.642301571672949,0.845726424575827,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0.312160076830321,0,0,0,0,0,0,0,0.206651562351531,1.18800285728205,0.494533858557114,0,2.15585442544872,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0.484938170456436,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,2.58543431515556,7.15312891703765,0,1.06375246633948,1.04007436911366,0,0,0,0.428933980974443,3.7983512377401,0,0,1.42156779497018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,1.24782516918484,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0.768834895534206,0,0.482561763430822,0,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0.546273504020151,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.953150969619124,0.255897791311334,1.28381696410176,0,0,2.15846949099978,2.19629623788844,1.88499843753098,0,0,0,1.46290121726877,0,0,0.409499734223957,0.848432591722276,0,0,0,0,0,2.62357900818653,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0.658589785919804,1.13841952129715,1.74967360122491,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0.999048047910651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0.756154618816195,0,0,0.159296767163702,0.899606224327209,0.310525913752519,0,0,12.0001364216699,0.450772826991655,0,0,0.181848659202559,0,0,3.18476710958893,0,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0.606965604236632,0,0.177404740325278,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0.735444965261716,0,0,0,0,0,0,0,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0.870866991587845,0,0,0,0.332660356546013,0,0,0,0,0,0.366724332548599,0,0,0,0 | |||
|short_description=p18@SPON2 | |||
}} |
Latest revision as of 20:31, 24 September 2015
Short description: | p18@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SPON2_5end |
Coexpression cluster: | NA |
Association with transcript: | -294bp_to_ENST00000503765, NM_001128325_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | D6RB12Q9BUD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 3.62e-24 | 3 |
smooth muscle cell of large intestine | 3.62e-24 | 3 |
smooth muscle cell of colon | 3.62e-24 | 3 |
trabecular meshwork cell | 3.77e-16 | 2 |
mesenchymal stem cell of Wharton's jelly | 2.60e-09 | 1 |
smooth muscle cell of the esophagus | 5.31e-09 | 1 |
amnion mesenchymal stem cell | 8.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 3.77e-16 | 2 |
aqueous drainage system | 3.77e-16 | 2 |
left cardiac atrium | 6.22e-09 | 1 |
colon | 2.04e-08 | 9 |
gastrointestinal system | 2.57e-07 | 25 |
intestine | 3.99e-07 | 17 |
large intestine | 5.76e-07 | 11 |