FFCP PHASE1:Mm9::chr14:121904469..121904486,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=56643|HGNC=|MCL_coexpression_id=12|UniProt=Q9JIP7,Q14BA3,Q3UWE2|association_with_transcript=0bp_to_ENSMUST00000088386,NM_053079,uc007vad.1_5end|description=CAGE_peak_1_at_Slc15a1_5end|id=chr14:121904469..121904486,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,4.82e-09,6;CL:0000677,4.82e-09,6;CL:0000584,4.82e-09,6;CL:0002563,8.43e-09,9;CL:0002251,8.43e-09,9;CL:0000075,1.42e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.89e-13!43;UBERON:0005409!1.23e-12!59;UBERON:0000344!2.34e-10!15;UBERON:0001242!7.37e-09!13;UBERON:0000060!7.37e-09!13;UBERON:0001262!7.37e-09!13;UBERON:0004786!7.37e-09!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-28,31;UBERON:0005409,4.16e-26,47;UBERON:0000344,1.54e-16,15;UBERON:0001242,4.60e-14,13;UBERON:0001262,4.60e-14,13;UBERON:0004786,4.60e-14,13;UBERON:0004923,4.32e-10,24;UBERON:0001007,5.67e-09,116;UBERON:0001555,5.67e-09,116;UBERON:0007026,5.67e-09,116;UBERON:0003350,8.43e-09,9;UBERON:0004808,8.43e-09,9;UBERON:0001277,8.43e-09,9;UBERON:0004119,1.24e-08,118;UBERON:0000925,1.24e-08,118;UBERON:0006595,1.24e-08,118;UBERON:0004921,8.73e-08,114;UBERON:0000485,7.17e-07,11;UBERON:0002108,8.70e-07,4;UBERON:0000014,9.73e-07,5;UBERON:0001003,9.73e-07,5;UBERON:0002097,9.73e-07,5;UBERON:0002199,9.73e-07,5;UBERON:0007029,9.73e-07,5;UBERON:0007376,9.73e-07,5;UBERON:0002416,9.73e-07,5;UBERON:0007383,9.73e-07,5|phase1_expression=0,367.820079651887,362.179394554071,202.046093152962,313.560726946413,14.6054966563344,16.1192722010913,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,131.833756381767,197.291981717766,338.222626863747,189.535278309993,195.647879278787,348.312927863533,546.14929118977,140.577143755463,0,0,0,0,1.99481574430191,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,22.7519960613438,0,0,0,0.14084341977668,0,0,0,0,0,0,74.4478895768271,0,0,0,0,0.230615497256059,0,0,0.125666591329675,8.40462890296871,0,0,0,0,0,11.1835056730873,0,0,335.41511348888,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0.20778804455956,0,0.305518091550949,0,0,0,0,0,0,0.60281927134286,0.0680364991513279,0,0,0,0,0,0,0,0.834141747676794,5.2237824978325,3.90986059175093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,333.062133247668,210.502651064181,0,0,0.515469845288373,7.05892336181699,10.8965241483986,19.9736907418187,232.519240156811,46.6098041868951,25.1335208800269,30.0424272782138,22.8107981929371,191.448534043349,221.325363071687,249.524015387722,0,0,0,0,0,0.280543279561274,0.189709611372772,0,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,2.13022309130459,0.172684981865896,1.44649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,3.83238230062325,0.178065603667255,0.488660878060728,9.73323725537959,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.614870295887855,10.5955600198971,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0.42366414172764,0,13.3557864882599,19.5371956302046,10.4944489374991,17.3089898804548,25.4418394604845,123.004913057797,0.556275906031529,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,1.83609079397062,8.99079672862215,8.95286511359328,9.03591120778299,6.52962300230154,6.28214260761671,0.518459893167171,4.34937519160848,0,0,0.496375471371293,0,0,0,0,0,0,0.724752362478018,0.864090018773596,0.632022241256357,0.202725215290164,0,0,0.358053391334963,0.198681354781265,0.360586348559907,0.738447635872886,0.201932899896295,0.304827226619999,0,0.682205165178267,0.288635524920988,0.584384510907845,16.09785723668,0,0,0,0,0.187682475451182,2.19781949120718,10.5040505748742,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.972426868273176,0,0.183843508450014,0.666740183404846,0.412070114477788,1.28367683836726,0.505394423527595,0.50695859978048,0.565879024158229,1.31098110457835,0.89635213366817,0.631790158511746,0.476293691283074,1.0429589335037,0.77163688185482,2.06042950401653,0.588795680537589,1.02860775715625,0.354951612318675,0,0.726732083161643,1.31753132581463,1.09998990259179,0.365855945745545,0.789209134313529,1.08643291076689,1.12228454331548,1.54225523561426,0.788035859004508,1.22769312950907,0.309873682371932,3.08650577569826,3.99696924700713,3.74290573512653,7.52048689169044,2.29545998482612,3.30887128679273,0|short_description=p1@Slc15a1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56643 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JIP7,Q14BA3,Q3UWE2 | |||
|association_with_transcript=0bp_to_ENSMUST00000088386,NM_053079,uc007vad.1_5end | |||
|cluster_id=chr14:121904469..121904486,- | |||
|description=CAGE_peak_1_at_Slc15a1_5end | |||
|id=chr14:121904469..121904486,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.82e-09,6;CL:0000677,4.82e-09,6;CL:0000584,4.82e-09,6;CL:0002563,8.43e-09,9;CL:0002251,8.43e-09,9;CL:0000075,1.42e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.89e-13!43;UBERON:0005409!1.23e-12!59;UBERON:0000344!2.34e-10!15;UBERON:0001242!7.37e-09!13;UBERON:0000060!7.37e-09!13;UBERON:0001262!7.37e-09!13;UBERON:0004786!7.37e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-28,31;UBERON:0005409,4.16e-26,47;UBERON:0000344,1.54e-16,15;UBERON:0001242,4.60e-14,13;UBERON:0001262,4.60e-14,13;UBERON:0004786,4.60e-14,13;UBERON:0004923,4.32e-10,24;UBERON:0001007,5.67e-09,116;UBERON:0001555,5.67e-09,116;UBERON:0007026,5.67e-09,116;UBERON:0003350,8.43e-09,9;UBERON:0004808,8.43e-09,9;UBERON:0001277,8.43e-09,9;UBERON:0004119,1.24e-08,118;UBERON:0000925,1.24e-08,118;UBERON:0006595,1.24e-08,118;UBERON:0004921,8.73e-08,114;UBERON:0000485,7.17e-07,11;UBERON:0002108,8.70e-07,4;UBERON:0000014,9.73e-07,5;UBERON:0001003,9.73e-07,5;UBERON:0002097,9.73e-07,5;UBERON:0002199,9.73e-07,5;UBERON:0007029,9.73e-07,5;UBERON:0007376,9.73e-07,5;UBERON:0002416,9.73e-07,5;UBERON:0007383,9.73e-07,5 | |||
|phase1_expression=0,367.820079651887,362.179394554071,202.046093152962,313.560726946413,14.6054966563344,16.1192722010913,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,131.833756381767,197.291981717766,338.222626863747,189.535278309993,195.647879278787,348.312927863533,546.14929118977,140.577143755463,0,0,0,0,1.99481574430191,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,22.7519960613438,0,0,0,0.14084341977668,0,0,0,0,0,0,74.4478895768271,0,0,0,0,0.230615497256059,0,0,0.125666591329675,8.40462890296871,0,0,0,0,0,11.1835056730873,0,0,335.41511348888,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0.20778804455956,0,0.305518091550949,0,0,0,0,0,0,0.60281927134286,0.0680364991513279,0,0,0,0,0,0,0,0.834141747676794,5.2237824978325,3.90986059175093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,333.062133247668,210.502651064181,0,0,0.515469845288373,7.05892336181699,10.8965241483986,19.9736907418187,232.519240156811,46.6098041868951,25.1335208800269,30.0424272782138,22.8107981929371,191.448534043349,221.325363071687,249.524015387722,0,0,0,0,0,0.280543279561274,0.189709611372772,0,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,2.13022309130459,0.172684981865896,1.44649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,3.83238230062325,0.178065603667255,0.488660878060728,9.73323725537959,0,0.242780636154981,0.302323556964751,0,0.295301892880773,0.614870295887855,10.5955600198971,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0.608929898229199,0,0.42366414172764,0,13.3557864882599,19.5371956302046,10.4944489374991,17.3089898804548,25.4418394604845,123.004913057797,0.556275906031529,0,0,0,0,0,0,0,0,0,6.68269432610579,0,0,1.83609079397062,8.99079672862215,8.95286511359328,9.03591120778299,6.52962300230154,6.28214260761671,0.518459893167171,4.34937519160848,0,0,0.496375471371293,0,0,0,0,0,0,0.724752362478018,0.864090018773596,0.632022241256357,0.202725215290164,0,0,0.358053391334963,0.198681354781265,0.360586348559907,0.738447635872886,0.201932899896295,0.304827226619999,0,0.682205165178267,0.288635524920988,0.584384510907845,16.09785723668,0,0,0,0,0.187682475451182,2.19781949120718,10.5040505748742,0,0,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.972426868273176,0,0.183843508450014,0.666740183404846,0.412070114477788,1.28367683836726,0.505394423527595,0.50695859978048,0.565879024158229,1.31098110457835,0.89635213366817,0.631790158511746,0.476293691283074,1.0429589335037,0.77163688185482,2.06042950401653,0.588795680537589,1.02860775715625,0.354951612318675,0,0.726732083161643,1.31753132581463,1.09998990259179,0.365855945745545,0.789209134313529,1.08643291076689,1.12228454331548,1.54225523561426,0.788035859004508,1.22769312950907,0.309873682371932,3.08650577569826,3.99696924700713,3.74290573512653,7.52048689169044,2.29545998482612,3.30887128679273,0 | |||
|short_description=p1@Slc15a1 | |||
}} |
Latest revision as of 16:52, 25 September 2015
Short description: | p1@Slc15a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc15a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000088386, NM_053079, uc007vad.1_5end |
EntrezGene: | Slc15a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.82e-09 | 6 |
gut absorptive cell | 4.82e-09 | 6 |
enterocyte | 4.82e-09 | 6 |
intestinal epithelial cell | 8.43e-09 | 9 |
epithelial cell of alimentary canal | 8.43e-09 | 9 |
columnar/cuboidal epithelial cell | 1.42e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.94e-28 | 31 |
gastrointestinal system | 4.16e-26 | 47 |
mucosa | 1.54e-16 | 15 |
intestinal mucosa | 4.60e-14 | 13 |
wall of intestine | 4.60e-14 | 13 |
gastrointestinal system mucosa | 4.60e-14 | 13 |
organ component layer | 4.32e-10 | 24 |
digestive system | 5.67e-09 | 116 |
digestive tract | 5.67e-09 | 116 |
primitive gut | 5.67e-09 | 116 |
epithelium of mucosa | 8.43e-09 | 9 |
gastrointestinal system epithelium | 8.43e-09 | 9 |
intestinal epithelium | 8.43e-09 | 9 |
endoderm-derived structure | 1.24e-08 | 118 |
endoderm | 1.24e-08 | 118 |
presumptive endoderm | 1.24e-08 | 118 |
subdivision of digestive tract | 8.73e-08 | 114 |
simple columnar epithelium | 7.17e-07 | 11 |
small intestine | 8.70e-07 | 4 |
zone of skin | 9.73e-07 | 5 |
skin epidermis | 9.73e-07 | 5 |
skin of body | 9.73e-07 | 5 |
integument | 9.73e-07 | 5 |
surface | 9.73e-07 | 5 |
outer epithelium | 9.73e-07 | 5 |
integumental system | 9.73e-07 | 5 |
enveloping layer of ectoderm | 9.73e-07 | 5 |