FFCP PHASE1:Hg19::chr3:58613323..58613342,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11170 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30827 | |||
|TSSclassifier=strong | |||
|UniProt=C9JAU5,O95990 | |||
|association_with_transcript=0bp_to_ENST00000465970,ENST00000474531,uc003dko.2_5end | |||
|cluster_id=chr3:58613323..58613342,- | |||
|coexpression_cluster_id=C550 | |||
|description=CAGE_peak_4_at_FAM107A_5end | |||
|id=chr3:58613323..58613342,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.27e-20;82!UBERON:0006215;5.58e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.52e-70!57;UBERON:0005068!3.52e-70!57;UBERON:0006241!3.52e-70!57;UBERON:0007135!3.52e-70!57;UBERON:0007023!7.70e-68!115;UBERON:0002616!3.02e-64!59;UBERON:0005743!4.39e-64!86;UBERON:0001017!1.68e-63!82;UBERON:0003075!1.55e-62!86;UBERON:0007284!1.55e-62!86;UBERON:0002346!8.08e-59!90;UBERON:0000955!1.37e-58!69;UBERON:0006238!1.37e-58!69;UBERON:0000073!4.55e-56!94;UBERON:0001016!4.55e-56!94;UBERON:0000033!1.88e-55!123;UBERON:0003080!3.18e-53!42;UBERON:0002780!4.38e-52!41;UBERON:0001890!4.38e-52!41;UBERON:0006240!4.38e-52!41;UBERON:0000153!8.76e-52!129;UBERON:0007811!8.76e-52!129;UBERON:0004121!1.19e-46!169;UBERON:0001893!2.07e-45!34;UBERON:0000924!5.50e-45!173;UBERON:0006601!5.50e-45!173;UBERON:0002020!7.70e-45!34;UBERON:0003528!7.70e-45!34;UBERON:0003056!1.02e-44!61;UBERON:0002791!4.94e-44!33;UBERON:0001869!2.65e-42!32;UBERON:0000956!6.84e-32!25;UBERON:0000203!6.84e-32!25;UBERON:0002619!1.83e-28!22;UBERON:0001950!2.47e-25!20;UBERON:0000477!1.53e-23!286;UBERON:0004111!6.03e-20!241;UBERON:0003076!2.77e-17!15;UBERON:0003057!2.77e-17!15;UBERON:0004733!1.55e-16!12;UBERON:0002028!1.55e-16!12;UBERON:0007277!1.55e-16!12;UBERON:0000481!4.80e-16!347;UBERON:0000475!1.39e-15!365;UBERON:0000025!1.90e-15!194;UBERON:0000062!2.94e-15!511;UBERON:0000064!3.36e-15!219;UBERON:0004732!5.26e-15!13;UBERON:0002420!6.19e-15!9;UBERON:0007245!6.19e-15!9;UBERON:0010009!6.19e-15!9;UBERON:0010011!6.19e-15!9;UBERON:0000454!6.19e-15!9;UBERON:0002308!2.84e-14!9;UBERON:0000125!2.84e-14!9;UBERON:0002680!1.17e-12!9;UBERON:0001895!1.17e-12!9;UBERON:0010092!1.17e-12!9;UBERON:0009663!5.53e-12!7;UBERON:0002298!1.46e-11!8;UBERON:0000483!1.72e-11!309;UBERON:0000119!3.50e-11!312;UBERON:0000923!5.35e-11!604;UBERON:0005291!5.35e-11!604;UBERON:0006598!5.35e-11!604;UBERON:0002532!5.35e-11!604;UBERON:0000922!5.52e-11!612;UBERON:0002050!6.31e-11!605;UBERON:0005423!6.31e-11!605;UBERON:0000467!1.21e-10!625;UBERON:0000480!1.42e-10!626;UBERON:0000468!1.46e-10!659;UBERON:0000200!1.80e-10!6;UBERON:0001871!3.17e-10!7;UBERON:0001044!7.02e-10!6;UBERON:0003293!7.02e-10!6;UBERON:0003294!7.02e-10!6;UBERON:0010047!7.02e-10!6;UBERON:0000167!7.02e-10!6;UBERON:0000349!3.73e-09!5;UBERON:0002037!4.05e-09!6;UBERON:0006215!4.05e-09!6;UBERON:0002021!1.50e-08!5;UBERON:0001894!4.88e-08!7;UBERON:0006222!4.88e-08!7;UBERON:0000369!2.24e-07!4;UBERON:0002435!2.24e-07!4;UBERON:0000204!2.24e-07!4;UBERON:0010082!2.24e-07!4;UBERON:0000166!7.33e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.01e-52;34!UBERON:0003528;1.52e-52;34!UBERON:0002020;1.52e-52;34!UBERON:0002791;3.46e-52;32!UBERON:0001869;5.35e-52;32!UBERON:0002780;4.85e-48;41!UBERON:0001890;4.85e-48;41!UBERON:0000073;9.96e-47;53!UBERON:0002616;9.96e-47;53!UBERON:0000956;4.46e-42;25!UBERON:0000203;4.46e-42;25!UBERON:0002619;2.61e-40;22!UBERON:0001950;1.68e-35;20!UBERON:0000955;9.44e-31;68!UBERON:0001017;2.18e-30;75!UBERON:0001016;7.15e-25;83!UBERON:0002420;2.34e-22;9!UBERON:0007245;2.34e-22;9!UBERON:0010009;2.34e-22;9!UBERON:0010011;2.34e-22;9!UBERON:0000454;2.34e-22;9!UBERON:0000125;2.32e-21;9!UBERON:0002308;2.32e-21;9!UBERON:0007023;1.68e-18;114!UBERON:0009663;8.86e-18;7!UBERON:0000200;2.03e-15;6!UBERON:0004733;8.25e-15;12!UBERON:0002028;8.25e-15;12!UBERON:0004732;1.57e-13;13!UBERON:0000349;2.45e-13;5!UBERON:0011216;3.20e-13;132!UBERON:0002298;3.86e-13;6!UBERON:0002021;2.00e-12;5!UBERON:0001044;9.22e-11;6!UBERON:0003293;9.22e-11;6!UBERON:0003294;9.22e-11;6!UBERON:0010047;9.22e-11;6!UBERON:0003408;9.22e-11;6!UBERON:0000167;9.22e-11;6!UBERON:0000369;1.25e-10;4!UBERON:0002435;1.25e-10;4!UBERON:0000204;1.25e-10;4!UBERON:0002784;2.24e-10;4!UBERON:0001871;1.55e-09;6!UBERON:0010314;1.81e-09;132!UBERON:0002680;2.56e-09;9!UBERON:0001895;2.56e-09;9!UBERON:0001894;6.96e-09;7!UBERON:0001870;1.26e-08;3!UBERON:0005383;1.91e-08;3!UBERON:0005382;1.91e-08;3!UBERON:0001872;2.69e-08;5!UBERON:0011135;6.11e-08;5!UBERON:0002216;6.11e-08;5!UBERON:0011134;6.11e-08;5!UBERON:0002209;6.11e-08;5!UBERON:0002213;6.11e-08;5!UBERON:0007844;6.11e-08;5!UBERON:0011138;6.11e-08;5!UBERON:0001130;6.11e-08;5!UBERON:0001066;6.11e-08;5!UBERON:0001468;6.11e-08;5!UBERON:0001896;1.09e-07;3!UBERON:0005290;1.09e-07;3!UBERON:0004121;1.25e-07;165!UBERON:0000161;3.10e-07;19!UBERON:0000166;3.10e-07;19!UBERON:0000988;4.09e-07;3!UBERON:0001897;8.61e-07;2!UBERON:0010225;8.61e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.83e-86,56;UBERON:0005068,2.83e-86,56;UBERON:0006241,2.83e-86,56;UBERON:0007135,2.83e-86,56;UBERON:0000073,3.19e-84,53;UBERON:0002616,3.19e-84,53;UBERON:0001017,8.77e-78,81;UBERON:0000955,2.22e-71,68;UBERON:0006238,2.22e-71,68;UBERON:0002780,3.78e-70,41;UBERON:0001890,3.78e-70,41;UBERON:0003080,3.78e-70,41;UBERON:0006240,3.78e-70,41;UBERON:0003075,3.61e-69,82;UBERON:0007284,3.61e-69,82;UBERON:0001016,1.06e-68,89;UBERON:0007023,8.01e-66,114;UBERON:0002346,2.54e-65,86;UBERON:0001893,8.28e-63,34;UBERON:0003528,5.79e-62,34;UBERON:0002020,5.79e-62,34;UBERON:0002791,3.53e-58,32;UBERON:0001869,5.12e-58,32;UBERON:0003056,1.48e-55,61;UBERON:0010371,1.20e-51,104;UBERON:0004121,7.40e-51,171;UBERON:0000924,7.40e-51,171;UBERON:0006601,7.40e-51,171;UBERON:0010314,4.87e-45,132;UBERON:0000956,5.29e-42,25;UBERON:0000203,5.29e-42,25;UBERON:0002619,2.51e-40,22;UBERON:0001950,1.72e-35,20;UBERON:0011216,2.07e-32,223;UBERON:0002420,2.15e-22,9;UBERON:0007245,2.15e-22,9;UBERON:0010009,2.15e-22,9;UBERON:0010011,2.15e-22,9;UBERON:0000454,2.15e-22,9;UBERON:0004111,2.04e-21,240;UBERON:0000125,2.33e-21,9;UBERON:0002308,2.33e-21,9;UBERON:0000025,2.50e-19,192;UBERON:0009663,8.66e-18,7;UBERON:0003076,6.56e-17,15;UBERON:0003057,6.56e-17,15;UBERON:0000200,1.96e-15,6;UBERON:0004733,7.13e-15,12;UBERON:0002028,7.13e-15,12;UBERON:0007277,7.13e-15,12;UBERON:0004732,1.37e-13,13;UBERON:0000349,2.19e-13,5;UBERON:0002298,3.00e-13,6;UBERON:0002021,1.91e-12,5;UBERON:0001044,8.86e-11,6;UBERON:0003293,8.86e-11,6;UBERON:0003294,8.86e-11,6;UBERON:0010047,8.86e-11,6;UBERON:0000167,8.86e-11,6;UBERON:0000369,1.27e-10,4;UBERON:0002435,1.27e-10,4;UBERON:0000204,1.27e-10,4;UBERON:0010082,1.27e-10,4;UBERON:0000483,1.34e-10,306;UBERON:0002784,1.89e-10,4;UBERON:0000119,2.28e-10,309;UBERON:0001871,1.51e-09,6;UBERON:0002680,2.37e-09,9;UBERON:0001895,2.37e-09,9;UBERON:0010092,2.37e-09,9;UBERON:0001894,6.29e-09,7;UBERON:0006222,6.29e-09,7;UBERON:0001870,1.36e-08,3;UBERON:0005383,1.89e-08,3;UBERON:0005382,1.89e-08,3;UBERON:0001872,2.72e-08,5;UBERON:0000923,2.99e-08,560;UBERON:0010316,2.99e-08,560;UBERON:0005291,2.99e-08,560;UBERON:0006598,2.99e-08,560;UBERON:0010317,2.99e-08,560;UBERON:0002532,2.99e-08,560;UBERON:0002050,4.55e-08,564;UBERON:0011135,6.78e-08,5;UBERON:0002216,6.78e-08,5;UBERON:0011134,6.78e-08,5;UBERON:0002209,6.78e-08,5;UBERON:0002213,6.78e-08,5;UBERON:0005856,6.78e-08,5;UBERON:0005866,6.78e-08,5;UBERON:0005863,6.78e-08,5;UBERON:0007844,6.78e-08,5;UBERON:0011138,6.78e-08,5;UBERON:0001130,6.78e-08,5;UBERON:0001066,6.78e-08,5;UBERON:0001468,6.78e-08,5;UBERON:0001896,1.00e-07,3;UBERON:0005290,1.00e-07,3;UBERON:0010096,1.00e-07,3;UBERON:0000922,2.31e-07,592;UBERON:0005423,2.53e-07,581;UBERON:0000988,3.45e-07,3;UBERON:0001897,8.62e-07,2;UBERON:0010225,8.62e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,4.33182235360163,2.31978163009541,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,1.43117993565528,1.09499540058307,0.753255837568817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.189069634328136,0,0,1.63723844372141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,5.71631679513701,0.859840221182376,7.74943358818241,1.18800285728205,0,0,0,0,0.125118519871964,0.554128230968366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95484983186195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,2.60279707715243,1.54657762555539,0.502548796003046,0,0,0,0,6.25726607767613,2.50085260529839,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,2.65631221636001,7.69856384538962,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97659059106519,20.2563959631138,0,0,7.60051469260776,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,9.92618650331809,1.99613798001194,0,0,0.724999575434793,0,0,0,0,0,0,8.85741385813839,4.5826646677655,16.7839909948792,9.28865783422287,8.27533333069933,9.87234287192876,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,13.4128254631547,0,6.09087558885882,0,0,0,0.789168805698781,0,0.61214552326098,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0,0,1.35588444468319,0,0,4.36844492095563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8075651967762,14.5119701625513,0,0,0,0.279282401272254,4.58320848023367,0,2.79550600698588,6.00916467391199,5.13294352116307,0.739018197353989,0,0,0,0,0,0,0,7.95229689809303,24.6528165061952,0,0,0,0,0,7.59369458225308,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,3.31045985182716,0,0,0,0,0,0,0,0,0,0,1.68067843270016,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,8.66386480803938,19.4045942595075,5.73409195690071,3.77158775225298,1.61450647647597,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.4849448489938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26679645790968,4.25089728976755,20.1138662412011,2.87162909937057,2.52071696221718,5.8092092069943,16.9549427913444,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,3.98471749248528,4.68646859168308,10.7477134180616,4.24885928299176,0,19.1890218400014,0,0,0,1.60710550763486,1.68141861109412,0,0.227662191351298,0,0,0,1.97112225632812,3.8805936402081,0.236387681767936,0,0.470958557103084,7.54154831596809,0,0,0.215927591218621,0,8.29127912449214,0,0,0,0,0.414432328326074,3.414369541879,4.83881763269864,9.03477453522583,0,0,3.38709640152743,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,1.37415926980462,1.18818560130834,0,0,8.83448829010624,0.966868319603658,0,0,0,0,0,6.88093925106811,6.59362082496676,0,9.11085968558257,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.530450887527676,0.267964130156178,21.5584054259283,17.1698773130746,0,0,0,0,1.34558235096736,0.445530107947154,0,0,0,0.0673520530145875,0.717222053926764,0.332660356546013,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p4@FAM107A | |||
}} |
Latest revision as of 06:36, 19 September 2015
Short description: | p4@FAM107A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FAM107A_5end |
Coexpression cluster: | C550_hippocampus_amygdala_globus_medial_occipital_thalamus_middle |
Association with transcript: | 0bp_to_ENST00000465970, ENST00000474531, uc003dko.2_5end |
EntrezGene: | FAM107A |
HGNC: | 30827 |
UniProt: | C9JAU5O95990 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data