FFCP PHASE1:Hg19::chr3:46068936..46068956,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2829 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1625 | |||
|TSSclassifier=strong | |||
|UniProt=Q689E2,P46094,Q502V0 | |||
|association_with_transcript=22bp_to_ENST00000395946,ENST00000542109,NM_001024644,NM_005283,uc003cpe.2,uc003cpf.2_5end | |||
|cluster_id=chr3:46068936..46068956,- | |||
|description=CAGE_peak_1_at_XCR1_5end | |||
|id=chr3:46068936..46068956,- | |||
|ontology_enrichment_celltype=CL:0002541!5.07e-11!3;CL:0000842!9.23e-10!3;CL:0000224!2.01e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.09e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,8.44e-16,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;4.17e-15;7!UBERON:0001045;3.64e-12;1!UBERON:0006242;3.64e-12;1!UBERON:0006965;4.69e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.94e-20!115;UBERON:0000178!3.23e-12!15;UBERON:0000179!3.23e-12!15;UBERON:0000463!3.23e-12!15;UBERON:0000476!5.07e-11!3;UBERON:0000920!5.07e-11!3;UBERON:0004177!2.74e-08!7;UBERON:0003124!6.88e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;2.86e-36;5!UBERON:0005057;2.86e-36;5!UBERON:0002370;8.98e-24;2!UBERON:0005058;8.98e-24;2!UBERON:0009113;8.98e-24;2!UBERON:0002106;7.00e-16;3!UBERON:0003124;9.09e-16;3!UBERON:0000920;9.09e-16;3!UBERON:0002405;1.38e-14;27!UBERON:0000029;1.05e-12;1!UBERON:0002372;3.64e-12;1!UBERON:0001154;3.64e-12;1!UBERON:0001153;3.64e-12;1!UBERON:0009854;3.64e-12;1!UBERON:0001961;3.64e-12;1!UBERON:0001744;3.64e-12;1!UBERON:0001042;3.64e-12;1!UBERON:0001735;3.64e-12;1!UBERON:0000160;4.21e-10;17!UBERON:0002108;6.65e-10;4!UBERON:0002193;4.88e-09;42!UBERON:0005409;6.02e-08;22!UBERON:0002390;8.80e-08;32!UBERON:0004921;3.75e-07;33!UBERON:0000922;5.30e-07;49!UBERON:0000077;6.53e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.22e-26,7;UBERON:0005057,5.22e-26,7;UBERON:0001042,5.57e-18,10;UBERON:0009145,5.57e-18,10;UBERON:0006562,2.25e-16,11;UBERON:0002106,6.74e-16,3;UBERON:0004854,6.74e-16,3;UBERON:0009034,6.74e-16,3;UBERON:0002095,6.74e-16,3;UBERON:0004782,6.74e-16,3;UBERON:0003281,6.74e-16,3;UBERON:0009664,6.74e-16,3;UBERON:0002296,6.74e-16,3;UBERON:0005602,6.74e-16,3;UBERON:0001179,6.74e-16,3;UBERON:0006293,6.74e-16,3;UBERON:0000920,8.44e-16,3;UBERON:0005409,4.78e-15,25;UBERON:0000029,1.11e-12,1;UBERON:0002370,2.33e-12,4;UBERON:0005058,2.33e-12,4;UBERON:0009113,2.33e-12,4;UBERON:0003295,2.33e-12,4;UBERON:0005562,2.33e-12,4;UBERON:0001154,2.75e-12,1;UBERON:0001153,2.75e-12,1;UBERON:0001045,2.75e-12,1;UBERON:0002372,3.45e-12,1;UBERON:0001961,3.45e-12,1;UBERON:0001744,3.45e-12,1;UBERON:0001735,3.45e-12,1;UBERON:0000160,4.01e-10,17;UBERON:0008814,4.31e-10,18;UBERON:0002108,6.51e-10,4;UBERON:0009722,9.69e-10,11;UBERON:0007690,9.69e-10,11;UBERON:0001557,1.40e-09,19;UBERON:0001007,3.47e-09,145;UBERON:0001555,3.47e-09,145;UBERON:0007026,3.47e-09,145;UBERON:0003351,1.55e-08,6;UBERON:0004119,3.62e-08,160;UBERON:0000925,3.62e-08,160;UBERON:0006595,3.62e-08,160;UBERON:0004921,5.47e-08,118;UBERON:0003124,2.77e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0.511946444617674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,1.65770349318689,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0.69169171316418,0,0,0.957003479195758,2.1983422416447,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,3.05515072466813,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.236417121897595,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.427149650270779,0.157204305099666,0.828478110694391,4.46549419630756,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0.227662191351298,0.532214220975833,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0.926089897295336,4.5897507705831,0,0,0,0,0,0,0,2.06764619555678,4.76988371004471,0,0,0,0,0,0.458729283404541,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,7.75066918032073,4.34523000071005,0,0,1.21270313374932,1.08858373948481,0,1.48174516632093,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,7.44713036286797,0 | |||
|short_description=p1@XCR1 | |||
}} |
Latest revision as of 09:46, 18 September 2015
Short description: | p1@XCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XCR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000395946, ENST00000542109, NM_001024644, NM_005283, uc003cpe.2, uc003cpf.2_5end |
EntrezGene: | XCR1 |
HGNC: | 1625 |
UniProt: | Q689E2P46094Q502V0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 8.44e-16 | 3 |