FFCP PHASE1:Hg19::chr3:35683726..35683735,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |||
|TSSclassifier=strong | |||
|UniProt=C9JD93 | |||
|association_with_transcript=-46bp_to_ENST00000452563_5end | |||
|cluster_id=chr3:35683726..35683735,+ | |||
|coexpression_cluster_id=C636 | |||
|description=CAGE_peak_41_at_ARPP21_5end | |||
|id=chr3:35683726..35683735,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.82e-09!6;CL:0000031!9.82e-09!6;CL:0000404!9.82e-09!6 | |||
|ontology_enrichment_celltype_v019=CL:0000817;7.62e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.30e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.57e-27!82;UBERON:0005743!1.05e-25!86;UBERON:0001869!2.40e-23!32;UBERON:0000073!7.57e-23!94;UBERON:0001016!7.57e-23!94;UBERON:0001950!1.96e-22!20;UBERON:0001893!7.39e-22!34;UBERON:0001049!1.20e-21!57;UBERON:0005068!1.20e-21!57;UBERON:0006241!1.20e-21!57;UBERON:0007135!1.20e-21!57;UBERON:0002619!2.52e-20!22;UBERON:0002791!3.48e-19!33;UBERON:0000955!3.91e-19!69;UBERON:0006238!3.91e-19!69;UBERON:0002020!1.44e-18!34;UBERON:0003528!1.44e-18!34;UBERON:0002616!3.24e-18!59;UBERON:0000956!9.04e-18!25;UBERON:0000203!9.04e-18!25;UBERON:0002780!9.11e-18!41;UBERON:0001890!9.11e-18!41;UBERON:0006240!9.11e-18!41;UBERON:0003080!2.72e-17!42;UBERON:0003075!5.37e-15!86;UBERON:0007284!5.37e-15!86;UBERON:0002346!3.65e-14!90;UBERON:0000200!2.47e-13!6;UBERON:0007023!1.30e-11!115;UBERON:0000153!3.44e-11!129;UBERON:0007811!3.44e-11!129;UBERON:0003056!3.51e-11!61;UBERON:0004121!1.09e-10!169;UBERON:0000924!2.46e-10!173;UBERON:0006601!2.46e-10!173;UBERON:0001871!3.05e-10!7;UBERON:0002021!4.81e-10!5;UBERON:0000033!3.39e-09!123;UBERON:0002771!1.62e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.14e-50;2!UBERON:0005058;1.14e-50;2!UBERON:0009113;1.14e-50;2!UBERON:0004177;5.44e-21;5!UBERON:0005057;5.44e-21;5!UBERON:0002114;1.53e-09;2!UBERON:0000922;2.86e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,5.94e-26,4;UBERON:0005058,5.94e-26,4;UBERON:0009113,5.94e-26,4;UBERON:0003295,5.94e-26,4;UBERON:0005562,5.94e-26,4;UBERON:0003351,1.12e-17,6;UBERON:0004177,2.65e-15,7;UBERON:0005057,2.65e-15,7;UBERON:0000974,5.15e-11,10;UBERON:0003408,5.15e-11,10;UBERON:0001042,5.15e-11,10;UBERON:0009145,5.15e-11,10;UBERON:0006562,4.22e-10,11;UBERON:0009722,4.22e-10,11;UBERON:0007690,4.22e-10,11;UBERON:0002114,1.54e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.50764638800914,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58696134274089,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.205116364240755,1.00828678488687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,2.7348740450911,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0.0679914901909147,1.30905207102113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58355639344024,2.97958628620118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p41@ARPP21 | |||
}} |
Latest revision as of 01:19, 18 September 2015
Short description: | p41@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_41_at_ARPP21_5end |
Coexpression cluster: | C636_thymus_skeletal_cerebellum_Hodgkin_temporal_duodenum_parietal |
Association with transcript: | -46bp_to_ENST00000452563_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | C9JD93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 5.94e-26 | 4 |
hemolymphoid system gland | 5.94e-26 | 4 |
thymic region | 5.94e-26 | 4 |
pharyngeal gland | 5.94e-26 | 4 |
thymus primordium | 5.94e-26 | 4 |
pharyngeal epithelium | 1.12e-17 | 6 |
hemopoietic organ | 2.65e-15 | 7 |
immune organ | 2.65e-15 | 7 |
neck | 5.15e-11 | 10 |
gland of gut | 5.15e-11 | 10 |
chordate pharynx | 5.15e-11 | 10 |
pharyngeal region of foregut | 5.15e-11 | 10 |
pharynx | 4.22e-10 | 11 |
entire pharyngeal arch endoderm | 4.22e-10 | 11 |
early pharyngeal endoderm | 4.22e-10 | 11 |
duodenum | 1.54e-09 | 2 |