FFCP PHASE1:Hg19::chr9:84202578..84202590,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:84202578..84202590,+
|short_description=p@chr9:84202578..84202590,+
|description=CAGE_peak_at_chr9:84202578..84202590,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:84202578..84202590,+ | |||
|description=CAGE_peak_at_chr9:84202578..84202590,+ | |||
|id=chr9:84202578..84202590,+ | |||
|ontology_enrichment_celltype=CL:0000349!7.30e-11!3;CL:0002577!7.30e-11!3;CL:0002541!1.59e-09!3;CL:0000066!1.96e-09!254;CL:0002536!2.27e-07!2;CL:1000415!2.74e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002577;1.59e-27;3!CL:0000349;3.69e-17;19!CL:0002537;6.66e-17;5!CL:1000415;3.34e-11;2!CL:0000322;6.78e-08;3!CL:0002178;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,1.22e-27,3;CL:0000349,3.77e-17,19;CL:0002537,8.14e-17,5;CL:1000415,3.02e-11,2;CL:0002178,6.78e-08,3;CL:0000322,7.26e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!9.57e-09!25;DOID:305!1.72e-08!106;DOID:4468!1.50e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;2.12e-11;2!DOID:3910;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.23e-11,2;DOID:3910,3.70e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.16e-25!14;UBERON:0000158!1.16e-25!14;UBERON:0003124!7.04e-16!7;UBERON:0000478!6.60e-14!24;UBERON:0000305!1.26e-11!7;UBERON:0004119!2.23e-11!169;UBERON:0000925!2.23e-11!169;UBERON:0006595!2.23e-11!169;UBERON:0004871!4.03e-10!8;UBERON:0000476!1.59e-09!3;UBERON:0000920!1.59e-09!3;UBERON:0001987!3.13e-08!4;UBERON:0004340!3.13e-08!4;UBERON:0002294!1.44e-07!7;UBERON:0001173!1.44e-07!7;UBERON:0004912!1.44e-07!7;UBERON:0005911!1.67e-07!82;UBERON:0001007!8.53e-07!155;UBERON:0001555!8.53e-07!155;UBERON:0007026!8.53e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;6.32e-21;4!UBERON:0000478;1.13e-13;24!UBERON:0000305;2.31e-12;7!UBERON:0004903;3.34e-11;2!UBERON:0002173;3.34e-11;2!UBERON:0002186;3.34e-11;2!UBERON:0005631;6.16e-09;10!UBERON:0000158;6.16e-09;10!UBERON:0005409;2.30e-08;22!UBERON:0002110;6.78e-08;3!UBERON:0004821;6.78e-08;3!UBERON:0007499;6.78e-08;3!UBERON:0003215;6.78e-08;3!UBERON:0010368;6.78e-08;3!UBERON:0009911;6.78e-08;3!UBERON:0002299;6.78e-08;3!UBERON:0002114;6.78e-08;2!UBERON:0006524;6.78e-08;3!UBERON:0008874;6.78e-08;3!UBERON:0002169;6.78e-08;3!UBERON:0004894;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.19e-23,14;UBERON:0000158,4.19e-23,14;UBERON:0001987,5.17e-21,4;UBERON:0004340,5.17e-21,4;UBERON:0000478,1.15e-13,24;UBERON:0003124,1.89e-12,7;UBERON:0000305,2.66e-12,7;UBERON:0004903,3.70e-11,2;UBERON:0002173,3.70e-11,2;UBERON:0002186,3.70e-11,2;UBERON:0004871,6.94e-11,8;UBERON:0002114,5.54e-08,2;UBERON:0002110,6.34e-08,3;UBERON:0006242,6.34e-08,3;UBERON:0004821,7.26e-08,3;UBERON:0003215,7.26e-08,3;UBERON:0010368,7.26e-08,3;UBERON:0009911,7.26e-08,3;UBERON:0002299,7.26e-08,3;UBERON:0006524,7.26e-08,3;UBERON:0008874,7.26e-08,3;UBERON:0002169,7.26e-08,3;UBERON:0004894,7.26e-08,3;UBERON:0005409,1.79e-07,25 | |||
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| ||
|short_description=p@chr9:84202578..84202590,+ | |||
}} | }} |
Latest revision as of 02:55, 1 August 2015
Short description: | p@chr9:84202578..84202590, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:84202578..84202590, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 1.22e-27 | 3 |
extraembryonic cell | 3.77e-17 | 19 |
amnion mesenchymal stem cell | 8.14e-17 | 5 |
epithelial cell of gall bladder | 3.02e-11 | 2 |
epithelial cell of stomach | 6.78e-08 | 3 |
pneumocyte | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.19e-23 | 14 |
membranous layer | 4.19e-23 | 14 |
placenta | 5.17e-21 | 4 |
allantois | 5.17e-21 | 4 |
extraembryonic structure | 1.15e-13 | 24 |
chorion | 1.89e-12 | 7 |
amnion | 2.66e-12 | 7 |
bronchoalveolar duct junction | 3.70e-11 | 2 |
alveolar duct | 3.70e-11 | 2 |
bronchiole | 3.70e-11 | 2 |
somatic layer of lateral plate mesoderm | 6.94e-11 | 8 |
duodenum | 5.54e-08 | 2 |
gallbladder | 6.34e-08 | 3 |
gall bladder primordium | 6.34e-08 | 3 |
pulmonary alveolus epithelium | 7.26e-08 | 3 |
alveolus | 7.26e-08 | 3 |
pulmonary lobule | 7.26e-08 | 3 |
lobule | 7.26e-08 | 3 |
alveolus of lung | 7.26e-08 | 3 |
alveolar system | 7.26e-08 | 3 |
pulmonary acinus | 7.26e-08 | 3 |
alveolar sac | 7.26e-08 | 3 |
alveolar wall | 7.26e-08 | 3 |
gastrointestinal system | 1.79e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.23e-11 | 2 |
lung adenocarcinoma | 3.70e-11 | 2 |