FFCP PHASE1:Hg19::chr3:185270383..185270406,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18483 | |||
|TSSclassifier=strong | |||
|UniProt=Q8WWY8 | |||
|association_with_transcript=0bp_to_ENST00000296252_5end | |||
|cluster_id=chr3:185270383..185270406,- | |||
|description=CAGE_peak_2_at_LIPH_5end | |||
|id=chr3:185270383..185270406,- | |||
|ontology_enrichment_celltype=CL:0000066!1.96e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.09e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0006595;4.71e-08;86!UBERON:0001041;3.54e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.06e-23!106;DOID:0050687!1.27e-16!143;DOID:162!9.78e-12!235;DOID:14566!2.06e-11!239;DOID:299!1.49e-08!25;DOID:1749!1.51e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.21e-09;25!DOID:1749;7.92e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.30e-17,106;DOID:0050687,3.17e-11,143;DOID:299,3.80e-09,25;DOID:1749,7.17e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.95e-17!129;UBERON:0004185!1.95e-17!129;UBERON:0001007!3.54e-17!155;UBERON:0001555!3.54e-17!155;UBERON:0007026!3.54e-17!155;UBERON:0004119!1.82e-16!169;UBERON:0000925!1.82e-16!169;UBERON:0006595!1.82e-16!169;UBERON:0000077!2.61e-14!130;UBERON:0001041!2.39e-11!98;UBERON:0000481!7.68e-10!347;UBERON:0000464!9.07e-10!104;UBERON:0001004!3.15e-09!72;UBERON:0003104!4.00e-09!238;UBERON:0009142!4.00e-09!238;UBERON:0000466!5.11e-09!126;UBERON:0005409!7.04e-09!35;UBERON:0000065!9.66e-08!53;UBERON:0005177!2.27e-07!107;UBERON:0002075!2.65e-07!18;UBERON:0008947!3.17e-07!38;UBERON:0003258!3.17e-07!38;UBERON:0002294!3.33e-07!7;UBERON:0001173!3.33e-07!7;UBERON:0004912!3.33e-07!7;UBERON:0007023!6.58e-07!115;UBERON:0000072!9.10e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.31e-12;33!UBERON:0005409;1.36e-12;22!UBERON:0002294;1.06e-10;7!UBERON:0001173;1.06e-10;7!UBERON:0000160;8.86e-10;17!UBERON:0002048;2.20e-07;22!UBERON:0000117;2.20e-07;22!UBERON:0000171;2.20e-07;22!UBERON:0000170;2.20e-07;22!UBERON:0002110;3.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.51e-15,118;UBERON:0001007,4.16e-14,145;UBERON:0001555,4.16e-14,145;UBERON:0007026,4.16e-14,145;UBERON:0004119,3.46e-13,160;UBERON:0000925,3.46e-13,160;UBERON:0006595,3.46e-13,160;UBERON:0005409,1.17e-12,25;UBERON:0000160,8.83e-10,17;UBERON:0005177,3.06e-08,101;UBERON:0002294,4.16e-08,9;UBERON:0001173,4.16e-08,9;UBERON:0004912,4.16e-08,9;UBERON:0005911,1.30e-07,82;UBERON:0001041,1.63e-07,87;UBERON:0002048,2.31e-07,22;UBERON:0000117,2.31e-07,22;UBERON:0000171,2.31e-07,22;UBERON:0000170,2.31e-07,22;UBERON:0005597,2.31e-07,22;UBERON:0000118,2.31e-07,22;UBERON:0002110,3.33e-07,3;UBERON:0006242,3.33e-07,3;UBERON:0002100,4.11e-07,199;UBERON:0005178,6.08e-07,34;UBERON:0002224,6.08e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.7030733015166,1.39560233594486,0,0,0,0,1.34465029290355,1.20538905604795,0,0,0,0,0,0,0,0,1.14620108621927,0.821005894499457,0.393553906568396,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0.364295288292542,0.741568885568859,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,2.78059279707759,0,0,0,0,0.24666754841716,0.933633106199299,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.964044119533928,0.330881918197182,0,0.71181185733329,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,15.4965432564323,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.82303003295338,12.2014684204041,0.299918973546171,0,0,0,0.239624855491583,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73500477386382,0,2.02578175658972,0.114814448164607,0,0,0.451199612907412,0.231046011313244,0,1.46139224653261,3.69430701125065,0,0,0,0,0,0,1.78413391131527,0,0,0,0,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0,0,0,0,0,0,0,1.06461206063404,0,0.55597265731176,2.71937284809783,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,1.01091240786658,0,0,0,0.731140468893853,0,0,0,0,0,1.32687795048244,2.19225442626881,0,0,0.811641507850816,0,0,0,0,0.35667105148125,0,0,0,0,0.349934720244983,0.192444225451024,0.670302275535787,0,1.7887322147588,0.43050537267123,0,1.33029046061003,2.06751060186264,1.01489521846434,0,0,0.238231775457789,0.411362273086194,0.648473311192717,0,0.79312517629427,0,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,1.33228787199128,0,2.61996756571508,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.494411622680279,0,0.597743964753209,1.38141957765574,0.251932747854276,0.20453736500431,0.615424027305347,0,2.42644548097782,10.3832281311853,0,2.95930216910801,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0,9.66163871112512,2.83665218121524,0,0.874813840149763,0,0,0.241192877250816,0,0,0,0,0.980446171670911,3.76444109552229,0.461701551022782,0.227884111694002,0.922255617552241,0.718061155278177,0,0,0,0,0,0,0,0,0.19606253431774,0.503464760927528,0,0,0.210998064528027,2.93819054686466,2.54435528581093,0,12.9384051040206,4.77670848318032,7.33236173920351,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,4.69595085437015,0,0,3.62972148145992,0,0,0.60129367765797,0.622129148383483,0.664653872707185,0.330991955875499,0.627865836814451,0,3.9845336444171,0,0.694238953340524,6.46749822934892,0.609414446062818,1.92199335066233,0,2.51566461351621,1.5348756588099,1.88865551222381,1.74580229679155,0,1.35588444468319,0,0,0.0633107959558787,19.5551382734803,4.72937039484049,3.84215390530835,0,12.247685458099,0,0,3.02515075775114,1.36677789121976,0.471388069233591,0,0.418411385249333,0,0,0,0,0,0.859530882839914,0,0,0,0,7.98716001995964,0.429226048136571,0,0.134366944973453,0,0,0,0,0,2.16540459332447,0.76205998859206,0,0,0,0,0,0.2249738915515,1.5476039091159,0.121499113316049,1.67717343799633,1.81253126788156,1.10154635083496,0.105600336519406,2.15144807199414,0.575745591958336,0,0,0,0,1.72844298240254,0,1.19730191562487,0.164185041498678,0,0,0,0,0.387848869084652,0.13223260174269,3.59282359557092,12.6866704017001,8.1158433551448,6.60258081418597,3.31391244277756,0,1.38328142328561,0,3.83004754662109,0,0,0,0,2.66991963625398,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0.796191777397232,0,0,0,0,0.385239660814607,0,0,0.906823702049089,0.231522474323834,0,0,0.926404341482917,0,0.176689145945881,0,0,0,0.690860683462397,4.86175929883811,0.276516872303462,0,0,0,0.327609848846413,0.737318726261158,4.01493034381391,0,0,0,1.13503190713367,0,0.279759015438889,0,0,0,0,0,0.169732529954025,0,0.495743057036009,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0,0,0,0.196295437002051,1.53360640352062,0.366857197043358,1.61735932610474,0,0,0,0.0752103283492573,0,3.90757005616546,0,0.982631505060581,13.8984721044023,0.0675375846183947,0,0,0.0634158101939068,0,2.74128883428591,1.48863353516788,0,1.91643641459393,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,0.685952037749674,0,0.197318320688547,0.118193840883968,0.889851215136553,3.9246546425257,0,5.32517110296199,0,0.863710364874486,0.47775168788705,0.357382720883282,0,0.348724276104376,0,0,0.207216164163037,0,0,2.58136415292167,0,0,0.423387050190929,0.4582137370881,0,0,0,2.35560560676583,9.87535192356382,0,0,0,2.91426595835484,0,0,0,0,0,0.603851374266694,7.9489382851183,0.655678681511872,1.41095188908457,0.245148321753905,4.24217784782927,0,0,0,0,0.281951753939561,0.322289439867886,8.49499825361896,5.35661815816973,4.58763333230399,5.85761976830928,15.3370641531769,0.917458566809082,0,0,0.203974470572744,0,4.7612415646386,0,0,0,0.126166424835079,1.09265571963696,0.380095503034311,0.509944148709909,1.06886962106224,0.0918948995348449,0,2.19758224832894,1.87574891109325,0,0,3.62497769231668,0.476128862927481,0,0.31037357147929,0,0,0,0.870866991587845,0.684466602170562,2.82878622661268,4.2316101181679,1.99596213927608,0.407016343054873,0,0,19.4920688571294,4.69281884806909,0.122241444182866,0.406896178315738,1.99727032255654,0,0.641136984606466 | |||
|short_description=p2@LIPH | |||
}} |
Latest revision as of 03:49, 17 September 2015
Short description: | p2@LIPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LIPH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000296252_5end |
EntrezGene: | LIPH |
HGNC: | 18483 |
UniProt: | Q8WWY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.09e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 1.51e-15 | 118 |
digestive system | 4.16e-14 | 145 |
digestive tract | 4.16e-14 | 145 |
primitive gut | 4.16e-14 | 145 |
endoderm-derived structure | 3.46e-13 | 160 |
endoderm | 3.46e-13 | 160 |
presumptive endoderm | 3.46e-13 | 160 |
gastrointestinal system | 1.17e-12 | 25 |
intestine | 8.83e-10 | 17 |
trunk region element | 3.06e-08 | 101 |
biliary system | 4.16e-08 | 9 |
biliary tree | 4.16e-08 | 9 |
biliary bud | 4.16e-08 | 9 |
endo-epithelium | 1.30e-07 | 82 |
foregut | 1.63e-07 | 87 |
lung | 2.31e-07 | 22 |
respiratory tube | 2.31e-07 | 22 |
respiration organ | 2.31e-07 | 22 |
pair of lungs | 2.31e-07 | 22 |
lung primordium | 2.31e-07 | 22 |
lung bud | 2.31e-07 | 22 |
gallbladder | 3.33e-07 | 3 |
gall bladder primordium | 3.33e-07 | 3 |
trunk | 4.11e-07 | 199 |
thoracic cavity element | 6.08e-07 | 34 |
thoracic cavity | 6.08e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.30e-17 | 106 |
cell type cancer | 3.17e-11 | 143 |
adenocarcinoma | 3.80e-09 | 25 |
squamous cell carcinoma | 7.17e-08 | 14 |