FFCP PHASE1:Hg19::chr9:74764099..74764124,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:74764099..74764124,+
|short_description=p8@GDA
|description=CAGE_peak_8_at_GDA_5end
|association_with_transcript=-142bp_to_NM_001242505,NM_001242506,NM_004...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9615 | |EntrezGene=9615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4212 | |HGNC=4212 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2T3 | |UniProt=Q9Y2T3 | ||
|association_with_transcript=-142bp_to_NM_001242505,NM_001242506,NM_004293_5end | |||
|cluster_id=chr9:74764099..74764124,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_8_at_GDA_5end | |||
|id=chr9:74764099..74764124,+ | |||
|ontology_enrichment_celltype=CL:0002150!1.09e-09!3;CL:0000861!1.09e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.60e-16!106;DOID:0050687!1.31e-10!143;DOID:299!1.69e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002619!7.38e-31!22;UBERON:0001950!1.90e-30!20;UBERON:0000956!9.33e-27!25;UBERON:0000203!9.33e-27!25;UBERON:0001869!9.68e-26!32;UBERON:0001893!5.74e-24!34;UBERON:0002020!1.02e-23!34;UBERON:0003528!1.02e-23!34;UBERON:0002791!5.56e-22!33;UBERON:0002780!4.21e-19!41;UBERON:0001890!4.21e-19!41;UBERON:0006240!4.21e-19!41;UBERON:0003080!1.54e-18!42;UBERON:0000200!9.18e-17!6;UBERON:0001049!1.53e-15!57;UBERON:0005068!1.53e-15!57;UBERON:0006241!1.53e-15!57;UBERON:0007135!1.53e-15!57;UBERON:0002616!7.74e-15!59;UBERON:0000955!1.13e-14!69;UBERON:0006238!1.13e-14!69;UBERON:0001737!6.93e-14!9;UBERON:0007023!1.41e-13!115;UBERON:0001017!1.03e-12!82;UBERON:0001871!4.80e-12!7;UBERON:0005743!7.48e-12!86;UBERON:0003056!2.49e-11!61;UBERON:0000073!3.41e-11!94;UBERON:0001016!3.41e-11!94;UBERON:0005409!2.56e-10!35;UBERON:0000160!3.11e-10!27;UBERON:0000062!4.36e-10!511;UBERON:0004921!7.53e-10!129;UBERON:0004185!7.53e-10!129;UBERON:0003075!1.26e-09!86;UBERON:0007284!1.26e-09!86;UBERON:0001872!2.19e-09!5;UBERON:0000481!5.11e-09!347;UBERON:0002346!5.76e-09!90;UBERON:0002771!7.01e-09!3;UBERON:0001007!1.42e-08!155;UBERON:0001555!1.42e-08!155;UBERON:0007026!1.42e-08!155;UBERON:0002108!2.23e-08!14;UBERON:0000064!2.61e-08!219;UBERON:0004119!2.81e-07!169;UBERON:0000925!2.81e-07!169;UBERON:0006595!2.81e-07!169;UBERON:0000923!4.23e-07!604;UBERON:0005291!4.23e-07!604;UBERON:0006598!4.23e-07!604;UBERON:0002532!4.23e-07!604;UBERON:0002050!4.62e-07!605;UBERON:0005423!4.62e-07!605;UBERON:0001870!6.28e-07!2;UBERON:0000922!8.50e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.05e-23;17!UBERON:0005409;3.18e-18;22!UBERON:0003112;1.12e-17;1!UBERON:0011158;1.12e-17;1!UBERON:0003128;1.12e-17;1!UBERON:0001703;1.12e-17;1!UBERON:0002241;1.12e-17;1!UBERON:0002108;1.72e-14;4!UBERON:0000059;3.08e-14;11!UBERON:0004921;2.07e-10;33!UBERON:0001155;2.42e-08;9!UBERON:0002114;6.50e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.05e-23,17;UBERON:0003112,1.44e-17,1;UBERON:0011158,1.44e-17,1;UBERON:0003128,1.44e-17,1;UBERON:0001703,1.44e-17,1;UBERON:0002241,1.44e-17,1;UBERON:0004761,1.44e-17,1;UBERON:0009617,1.44e-17,1;UBERON:0005409,3.90e-16,25;UBERON:0002108,1.72e-14,4;UBERON:0000059,3.08e-14,11;UBERON:0005253,1.86e-09,2;UBERON:0001155,2.46e-08,9;UBERON:0002114,6.50e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.842923450390509,0,0.55146986366197,0.435758888184812,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0.969332746095218,1.57705766875147,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.438770794307945,0.435753854075961,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,0,0,5.13053874119367,1.22206028986725,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,3.62972148145992,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.195984794828755,0,0,0,0.677294319023596,1.38869702463753,1.06750094169172,0,0,0,0,0,0.759729551470544,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0.394028536495991,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.159633859057151,0.82046545696302,0,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0.295712172434091,0.87798860003913,1.56215619722769,0.206686796501184,0.760989722326882,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.40781839786099,0.72350050919134,0,0,0,0,2.5224494698241,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,9.41524728916925,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0,0,0.449126010532934,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.842923450390509,0,0.55146986366197,0.435758888184812,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0.969332746095218,1.57705766875147,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.438770794307945,0.435753854075961,0.697118721393016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28525931422807,0,0,0,5.13053874119367,1.22206028986725,0,0,0,0,0,0,0,0.586993856796269,0,0.394584402849391,3.62972148145992,0.30607276163049,0,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.195984794828755,0,0,0,0.677294319023596,1.38869702463753,1.06750094169172,0,0,0,0,0,0.759729551470544,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0.394028536495991,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.159633859057151,0.82046545696302,0,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0,0,0,0,0.818859587550484,0.295712172434091,0.87798860003913,1.56215619722769,0.206686796501184,0.760989722326882,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.40781839786099,0.72350050919134,0,0,0,0,2.5224494698241,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,9.41524728916925,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475940431336403,0,4.2322147241232,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488419611665847,0,0,0.449126010532934,0,0,0,0,0,0 | ||
|short_description=p8@GDA | |||
}} | }} |
Latest revision as of 19:30, 17 September 2015
Short description: | p8@GDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GDA_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -142bp_to_NM_001242505, NM_001242506, NM_004293_5end |
EntrezGene: | GDA |
HGNC: | 4212 |
UniProt: | Q9Y2T3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.05e-23 | 17 |
olfactory region | 1.44e-17 | 1 |
primary subdivision of skull | 1.44e-17 | 1 |
cranium | 1.44e-17 | 1 |
neurocranium | 1.44e-17 | 1 |
chondrocranium | 1.44e-17 | 1 |
cartilaginous neurocranium | 1.44e-17 | 1 |
head paraxial mesoderm | 1.44e-17 | 1 |
gastrointestinal system | 3.90e-16 | 25 |
small intestine | 1.72e-14 | 4 |
large intestine | 3.08e-14 | 11 |
head mesenchyme | 1.86e-09 | 2 |
colon | 2.46e-08 | 9 |
duodenum | 6.50e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.22e-09 | 2 |