FFCP PHASE1:Mm9::chr11:70500401..70500460,-: Difference between revisions
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{{FFCP|EntrezGene=216874|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=-458bp_to_uc007jwb.2_5end|description=CAGE_peak_3_at_Camta2_5end|id=chr11:70500401..70500460,-|ontology_enrichment_celltype=CL:0002563!4.36e-13!9;CL:0002251!4.36e-13!9;CL:0000239!2.96e-10!6;CL:0000677!2.96e-10!6;CL:0000212!2.96e-10!6;CL:0000584!2.96e-10!6;CL:0000075!1.28e-08!7;CL:0000066!7.64e-08!25;CL:0002076!5.50e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,8.11e-20,6;CL:0000677,8.11e-20,6;CL:0000584,8.11e-20,6;CL:0000075,6.65e-17,7;CL:0002563,5.17e-13,9;CL:0002251,5.17e-13,9;CL:0000682,1.39e-10,3;CL:0000066,2.12e-09,25;CL:0002076,1.49e-07,15;CL:0000473,1.52e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!4.20e-22!43;UBERON:0000344!1.28e-21!15;UBERON:0005409!2.78e-20!59;UBERON:0001242!5.54e-19!13;UBERON:0000060!5.54e-19!13;UBERON:0001262!5.54e-19!13;UBERON:0004786!5.54e-19!13;UBERON:0004923!2.21e-13!24;UBERON:0003350!4.36e-13!9;UBERON:0004808!4.36e-13!9;UBERON:0001277!4.36e-13!9;UBERON:0000485!2.66e-10!11;UBERON:0001007!6.76e-10!128;UBERON:0001555!6.76e-10!128;UBERON:0007026!6.76e-10!128;UBERON:0004119!1.42e-09!130;UBERON:0000925!1.42e-09!130;UBERON:0006595!1.42e-09!130;UBERON:0004921!1.24e-08!126;UBERON:0004185!1.24e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.65e-42,31;UBERON:0000344,1.15e-29,15;UBERON:0005409,1.42e-29,47;UBERON:0001242,2.50e-24,13;UBERON:0001262,2.50e-24,13;UBERON:0004786,2.50e-24,13;UBERON:0004923,1.16e-17,24;UBERON:0002108,1.58e-13,4;UBERON:0003350,5.17e-13,9;UBERON:0004808,5.17e-13,9;UBERON:0001277,5.17e-13,9;UBERON:0001007,1.03e-11,116;UBERON:0001555,1.03e-11,116;UBERON:0007026,1.03e-11,116;UBERON:0004119,1.95e-11,118;UBERON:0000925,1.95e-11,118;UBERON:0006595,1.95e-11,118;UBERON:0000331,6.59e-11,3;UBERON:0002116,6.59e-11,3;UBERON:0001204,6.59e-11,3;UBERON:0001168,6.59e-11,3;UBERON:0000485,1.56e-10,11;UBERON:0004921,1.20e-09,114;UBERON:0001155,2.68e-08,2;UBERON:0000059,2.68e-08,2;UBERON:0001962,5.42e-07,2;UBERON:0001961,5.42e-07,2;UBERON:0001744,5.42e-07,2|phase1_expression=0,13.2610654902957,15.0149748998547,17.2404600444893,15.5277676283368,7.89032577985882,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83962871687693,4.12936705920906,13.2073351746455,12.9228598847722,9.69620547086501,16.7220609121609,19.1542898617547,7.98229838359097,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,26.0948465705371,0,0.41889341362691,19.4147361958529,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,10.5734010554815,4.7601101999438,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,7.59246498471219,0.494096864172033,1.00534083520108,1.1937388322469,1.36474860983384,17.9763881730844,9.07779809473716,6.37252074413975,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,2.71952841909355,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,12.9614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p3@Camta2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216874 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-458bp_to_uc007jwb.2_5end | |||
|cluster_id=chr11:70500401..70500460,- | |||
|description=CAGE_peak_3_at_Camta2_5end | |||
|id=chr11:70500401..70500460,- | |||
|ontology_enrichment_celltype=CL:0002563!4.36e-13!9;CL:0002251!4.36e-13!9;CL:0000239!2.96e-10!6;CL:0000677!2.96e-10!6;CL:0000212!2.96e-10!6;CL:0000584!2.96e-10!6;CL:0000075!1.28e-08!7;CL:0000066!7.64e-08!25;CL:0002076!5.50e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,8.11e-20,6;CL:0000677,8.11e-20,6;CL:0000584,8.11e-20,6;CL:0000075,6.65e-17,7;CL:0002563,5.17e-13,9;CL:0002251,5.17e-13,9;CL:0000682,1.39e-10,3;CL:0000066,2.12e-09,25;CL:0002076,1.49e-07,15;CL:0000473,1.52e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.20e-22!43;UBERON:0000344!1.28e-21!15;UBERON:0005409!2.78e-20!59;UBERON:0001242!5.54e-19!13;UBERON:0000060!5.54e-19!13;UBERON:0001262!5.54e-19!13;UBERON:0004786!5.54e-19!13;UBERON:0004923!2.21e-13!24;UBERON:0003350!4.36e-13!9;UBERON:0004808!4.36e-13!9;UBERON:0001277!4.36e-13!9;UBERON:0000485!2.66e-10!11;UBERON:0001007!6.76e-10!128;UBERON:0001555!6.76e-10!128;UBERON:0007026!6.76e-10!128;UBERON:0004119!1.42e-09!130;UBERON:0000925!1.42e-09!130;UBERON:0006595!1.42e-09!130;UBERON:0004921!1.24e-08!126;UBERON:0004185!1.24e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.65e-42,31;UBERON:0000344,1.15e-29,15;UBERON:0005409,1.42e-29,47;UBERON:0001242,2.50e-24,13;UBERON:0001262,2.50e-24,13;UBERON:0004786,2.50e-24,13;UBERON:0004923,1.16e-17,24;UBERON:0002108,1.58e-13,4;UBERON:0003350,5.17e-13,9;UBERON:0004808,5.17e-13,9;UBERON:0001277,5.17e-13,9;UBERON:0001007,1.03e-11,116;UBERON:0001555,1.03e-11,116;UBERON:0007026,1.03e-11,116;UBERON:0004119,1.95e-11,118;UBERON:0000925,1.95e-11,118;UBERON:0006595,1.95e-11,118;UBERON:0000331,6.59e-11,3;UBERON:0002116,6.59e-11,3;UBERON:0001204,6.59e-11,3;UBERON:0001168,6.59e-11,3;UBERON:0000485,1.56e-10,11;UBERON:0004921,1.20e-09,114;UBERON:0001155,2.68e-08,2;UBERON:0000059,2.68e-08,2;UBERON:0001962,5.42e-07,2;UBERON:0001961,5.42e-07,2;UBERON:0001744,5.42e-07,2 | |||
|phase1_expression=0,13.2610654902957,15.0149748998547,17.2404600444893,15.5277676283368,7.89032577985882,8.64366770203445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.83962871687693,4.12936705920906,13.2073351746455,12.9228598847722,9.69620547086501,16.7220609121609,19.1542898617547,7.98229838359097,0,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,26.0948465705371,0,0.41889341362691,19.4147361958529,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0,10.5734010554815,4.7601101999438,0,0,0.128867461322093,0.201683524623343,0,0.380451252225118,7.59246498471219,0.494096864172033,1.00534083520108,1.1937388322469,1.36474860983384,17.9763881730844,9.07779809473716,6.37252074413975,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0,0,0,2.71952841909355,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.66369338607761,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0.26175594198403,12.9614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Camta2 | |||
}} |
Latest revision as of 15:04, 25 September 2015
Short description: | p3@Camta2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Camta2_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -458bp_to_uc007jwb.2_5end |
EntrezGene: | Camta2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 8.11e-20 | 6 |
gut absorptive cell | 8.11e-20 | 6 |
enterocyte | 8.11e-20 | 6 |
columnar/cuboidal epithelial cell | 6.65e-17 | 7 |
intestinal epithelial cell | 5.17e-13 | 9 |
epithelial cell of alimentary canal | 5.17e-13 | 9 |
M cell of gut | 1.39e-10 | 3 |
epithelial cell | 2.12e-09 | 25 |
endo-epithelial cell | 1.49e-07 | 15 |
defensive cell | 1.52e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.65e-42 | 31 |
mucosa | 1.15e-29 | 15 |
gastrointestinal system | 1.42e-29 | 47 |
intestinal mucosa | 2.50e-24 | 13 |
wall of intestine | 2.50e-24 | 13 |
gastrointestinal system mucosa | 2.50e-24 | 13 |
organ component layer | 1.16e-17 | 24 |
small intestine | 1.58e-13 | 4 |
epithelium of mucosa | 5.17e-13 | 9 |
gastrointestinal system epithelium | 5.17e-13 | 9 |
intestinal epithelium | 5.17e-13 | 9 |
digestive system | 1.03e-11 | 116 |
digestive tract | 1.03e-11 | 116 |
primitive gut | 1.03e-11 | 116 |
endoderm-derived structure | 1.95e-11 | 118 |
endoderm | 1.95e-11 | 118 |
presumptive endoderm | 1.95e-11 | 118 |
ileal mucosa | 6.59e-11 | 3 |
ileum | 6.59e-11 | 3 |
mucosa of small intestine | 6.59e-11 | 3 |
wall of small intestine | 6.59e-11 | 3 |
simple columnar epithelium | 1.56e-10 | 11 |
subdivision of digestive tract | 1.20e-09 | 114 |
colon | 2.68e-08 | 2 |
large intestine | 2.68e-08 | 2 |
gut-associated lymphoid tissue | 5.42e-07 | 2 |
mucosa-associated lymphoid tissue | 5.42e-07 | 2 |
lymphoid tissue | 5.42e-07 | 2 |