FFCP PHASE1:Mm9::chr11:61267494..61267521,-: Difference between revisions
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{{FFCP|EntrezGene=22671|HGNC=|MCL_coexpression_id=2|UniProt=Q96DY5,Q8JZT5|association_with_transcript=0bp_to_ENSMUST00000054927,ENSMUST00000060255_5end|description=CAGE_peak_2_at_Rnf112_5end|id=chr11:61267494..61267521,-|ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000117!9.42e-14!23;CL:0000337!9.42e-14!23;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0000221!4.09e-10!44;CL:0000133!4.09e-10!44;CL:0002319!5.56e-10!43;CL:0000055!3.84e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-14,23;CL:0000337,1.19e-14,23;CL:0000540,3.79e-09,33;CL:0000047,3.79e-09,33;CL:0000031,3.79e-09,33;CL:0000404,3.79e-09,33;CL:0000393,3.16e-07,39;CL:0000211,3.16e-07,39;CL:0002610,6.47e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.98e-35!73;UBERON:0005743!3.98e-35!73;UBERON:0000073!2.33e-34!75;UBERON:0001016!2.33e-34!75;UBERON:0001049!1.01e-33!52;UBERON:0005068!1.01e-33!52;UBERON:0006241!1.01e-33!52;UBERON:0007135!1.01e-33!52;UBERON:0000955!1.43e-32!50;UBERON:0006238!1.43e-32!50;UBERON:0002616!8.23e-32!49;UBERON:0000033!7.11e-28!63;UBERON:0004121!7.46e-28!102;UBERON:0000924!7.46e-28!102;UBERON:0006601!7.46e-28!102;UBERON:0003080!8.04e-28!40;UBERON:0002346!2.85e-27!71;UBERON:0003075!2.85e-27!71;UBERON:0007284!2.85e-27!71;UBERON:0002780!5.19e-27!39;UBERON:0001890!5.19e-27!39;UBERON:0006240!5.19e-27!39;UBERON:0002020!1.36e-23!34;UBERON:0003056!3.51e-23!49;UBERON:0002791!5.43e-20!29;UBERON:0003528!5.43e-20!29;UBERON:0001893!5.43e-20!29;UBERON:0000153!1.81e-15!94;UBERON:0007811!1.14e-14!86;UBERON:0000956!2.64e-14!21;UBERON:0001869!2.64e-14!21;UBERON:0000203!2.64e-14!21;UBERON:0002619!2.55e-12!17;UBERON:0002021!1.75e-10!10;UBERON:0000411!1.75e-10!10;UBERON:0001950!1.75e-10!10;UBERON:0000025!1.23e-08!114;UBERON:0004111!4.72e-08!122;UBERON:0001894!8.43e-08!10;UBERON:0006222!8.43e-08!10;UBERON:0002420!7.14e-07!8;UBERON:0007245!7.14e-07!8;UBERON:0010009!7.14e-07!8;UBERON:0010011!7.14e-07!8;UBERON:0000454!7.14e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-59,54;UBERON:0001049,3.30e-55,52;UBERON:0005068,3.30e-55,52;UBERON:0006241,3.30e-55,52;UBERON:0007135,3.30e-55,52;UBERON:0000955,5.90e-47,47;UBERON:0006238,5.90e-47,47;UBERON:0001017,5.89e-46,73;UBERON:0002616,2.17e-45,46;UBERON:0001016,1.80e-44,75;UBERON:0002346,4.34e-43,64;UBERON:0003075,4.34e-43,64;UBERON:0007284,4.34e-43,64;UBERON:0003080,1.06e-40,40;UBERON:0002780,5.01e-39,39;UBERON:0001890,5.01e-39,39;UBERON:0006240,5.01e-39,39;UBERON:0002020,1.13e-36,34;UBERON:0010371,1.30e-36,73;UBERON:0004121,4.72e-33,95;UBERON:0000924,4.72e-33,95;UBERON:0006601,4.72e-33,95;UBERON:0003056,9.42e-32,49;UBERON:0003528,4.69e-29,29;UBERON:0002791,4.69e-29,29;UBERON:0001893,4.69e-29,29;UBERON:0010314,4.34e-27,92;UBERON:0002021,2.39e-21,10;UBERON:0000411,2.39e-21,10;UBERON:0001950,2.39e-21,10;UBERON:0000025,2.92e-21,114;UBERON:0004111,3.11e-19,122;UBERON:0002619,3.90e-19,17;UBERON:0000956,2.48e-17,21;UBERON:0001869,2.48e-17,21;UBERON:0000203,2.48e-17,21;UBERON:0003076,1.08e-13,12;UBERON:0003057,1.08e-13,12;UBERON:0002420,2.37e-13,8;UBERON:0007245,2.37e-13,8;UBERON:0010009,2.37e-13,8;UBERON:0010011,2.37e-13,8;UBERON:0000454,2.37e-13,8;UBERON:0011216,6.51e-12,194;UBERON:0000483,1.37e-10,174;UBERON:0001894,2.31e-10,10;UBERON:0006222,2.31e-10,10;UBERON:0000119,2.33e-10,176;UBERON:0002240,3.39e-10,6;UBERON:0005174,3.39e-10,6;UBERON:0001137,3.39e-10,6;UBERON:0001948,9.00e-09,5;UBERON:0002315,9.00e-09,5;UBERON:0000369,1.93e-08,5;UBERON:0002435,1.93e-08,5;UBERON:0000204,1.93e-08,5;UBERON:0010082,1.93e-08,5;UBERON:0002950,4.45e-08,4;UBERON:0001891,4.45e-08,4;UBERON:0009616,4.45e-08,4;UBERON:0010286,4.45e-08,4;UBERON:0000007,3.00e-07,8;UBERON:0003296,3.00e-07,8;UBERON:0010133,3.00e-07,8;UBERON:0004684,6.47e-07,3;UBERON:0002275,6.47e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0.210324961351382,3.42781181284564,3.09215957332259,0.734944795289724,0.575072826109418,1.83843757322004,13.2139057199266,9.3211756802187,14.5926206593431,1.71452174049252,2.65314166446988,1.04182674111352,5.02529398202486,7.87867654044352,6.57032465440283,3.24091444021034,2.13557521198654,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,16.1029438356351,18.850203613211,0,0,0,0,3.74476598512057,6.8625090422794,1.13088916901578,11.1247564923057,11.5071955798649,10.1816141834184,8.27430441645564,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.703804496655795,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22671 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q96DY5,Q8JZT5 | |||
|association_with_transcript=0bp_to_ENSMUST00000054927,ENSMUST00000060255_5end | |||
|cluster_id=chr11:61267494..61267521,- | |||
|description=CAGE_peak_2_at_Rnf112_5end | |||
|id=chr11:61267494..61267521,- | |||
|ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000117!9.42e-14!23;CL:0000337!9.42e-14!23;CL:0000393!1.03e-10!39;CL:0000211!1.03e-10!39;CL:0000221!4.09e-10!44;CL:0000133!4.09e-10!44;CL:0002319!5.56e-10!43;CL:0000055!3.84e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.19e-14,23;CL:0000337,1.19e-14,23;CL:0000540,3.79e-09,33;CL:0000047,3.79e-09,33;CL:0000031,3.79e-09,33;CL:0000404,3.79e-09,33;CL:0000393,3.16e-07,39;CL:0000211,3.16e-07,39;CL:0002610,6.47e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.98e-35!73;UBERON:0005743!3.98e-35!73;UBERON:0000073!2.33e-34!75;UBERON:0001016!2.33e-34!75;UBERON:0001049!1.01e-33!52;UBERON:0005068!1.01e-33!52;UBERON:0006241!1.01e-33!52;UBERON:0007135!1.01e-33!52;UBERON:0000955!1.43e-32!50;UBERON:0006238!1.43e-32!50;UBERON:0002616!8.23e-32!49;UBERON:0000033!7.11e-28!63;UBERON:0004121!7.46e-28!102;UBERON:0000924!7.46e-28!102;UBERON:0006601!7.46e-28!102;UBERON:0003080!8.04e-28!40;UBERON:0002346!2.85e-27!71;UBERON:0003075!2.85e-27!71;UBERON:0007284!2.85e-27!71;UBERON:0002780!5.19e-27!39;UBERON:0001890!5.19e-27!39;UBERON:0006240!5.19e-27!39;UBERON:0002020!1.36e-23!34;UBERON:0003056!3.51e-23!49;UBERON:0002791!5.43e-20!29;UBERON:0003528!5.43e-20!29;UBERON:0001893!5.43e-20!29;UBERON:0000153!1.81e-15!94;UBERON:0007811!1.14e-14!86;UBERON:0000956!2.64e-14!21;UBERON:0001869!2.64e-14!21;UBERON:0000203!2.64e-14!21;UBERON:0002619!2.55e-12!17;UBERON:0002021!1.75e-10!10;UBERON:0000411!1.75e-10!10;UBERON:0001950!1.75e-10!10;UBERON:0000025!1.23e-08!114;UBERON:0004111!4.72e-08!122;UBERON:0001894!8.43e-08!10;UBERON:0006222!8.43e-08!10;UBERON:0002420!7.14e-07!8;UBERON:0007245!7.14e-07!8;UBERON:0010009!7.14e-07!8;UBERON:0010011!7.14e-07!8;UBERON:0000454!7.14e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.80e-59,54;UBERON:0001049,3.30e-55,52;UBERON:0005068,3.30e-55,52;UBERON:0006241,3.30e-55,52;UBERON:0007135,3.30e-55,52;UBERON:0000955,5.90e-47,47;UBERON:0006238,5.90e-47,47;UBERON:0001017,5.89e-46,73;UBERON:0002616,2.17e-45,46;UBERON:0001016,1.80e-44,75;UBERON:0002346,4.34e-43,64;UBERON:0003075,4.34e-43,64;UBERON:0007284,4.34e-43,64;UBERON:0003080,1.06e-40,40;UBERON:0002780,5.01e-39,39;UBERON:0001890,5.01e-39,39;UBERON:0006240,5.01e-39,39;UBERON:0002020,1.13e-36,34;UBERON:0010371,1.30e-36,73;UBERON:0004121,4.72e-33,95;UBERON:0000924,4.72e-33,95;UBERON:0006601,4.72e-33,95;UBERON:0003056,9.42e-32,49;UBERON:0003528,4.69e-29,29;UBERON:0002791,4.69e-29,29;UBERON:0001893,4.69e-29,29;UBERON:0010314,4.34e-27,92;UBERON:0002021,2.39e-21,10;UBERON:0000411,2.39e-21,10;UBERON:0001950,2.39e-21,10;UBERON:0000025,2.92e-21,114;UBERON:0004111,3.11e-19,122;UBERON:0002619,3.90e-19,17;UBERON:0000956,2.48e-17,21;UBERON:0001869,2.48e-17,21;UBERON:0000203,2.48e-17,21;UBERON:0003076,1.08e-13,12;UBERON:0003057,1.08e-13,12;UBERON:0002420,2.37e-13,8;UBERON:0007245,2.37e-13,8;UBERON:0010009,2.37e-13,8;UBERON:0010011,2.37e-13,8;UBERON:0000454,2.37e-13,8;UBERON:0011216,6.51e-12,194;UBERON:0000483,1.37e-10,174;UBERON:0001894,2.31e-10,10;UBERON:0006222,2.31e-10,10;UBERON:0000119,2.33e-10,176;UBERON:0002240,3.39e-10,6;UBERON:0005174,3.39e-10,6;UBERON:0001137,3.39e-10,6;UBERON:0001948,9.00e-09,5;UBERON:0002315,9.00e-09,5;UBERON:0000369,1.93e-08,5;UBERON:0002435,1.93e-08,5;UBERON:0000204,1.93e-08,5;UBERON:0010082,1.93e-08,5;UBERON:0002950,4.45e-08,4;UBERON:0001891,4.45e-08,4;UBERON:0009616,4.45e-08,4;UBERON:0010286,4.45e-08,4;UBERON:0000007,3.00e-07,8;UBERON:0003296,3.00e-07,8;UBERON:0010133,3.00e-07,8;UBERON:0004684,6.47e-07,3;UBERON:0002275,6.47e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14660173558958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0.210324961351382,3.42781181284564,3.09215957332259,0.734944795289724,0.575072826109418,1.83843757322004,13.2139057199266,9.3211756802187,14.5926206593431,1.71452174049252,2.65314166446988,1.04182674111352,5.02529398202486,7.87867654044352,6.57032465440283,3.24091444021034,2.13557521198654,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0,0.230615497256059,0,0.352766121407114,0,0,0,0,0,0,0,0,16.1029438356351,18.850203613211,0,0,0,0,3.74476598512057,6.8625090422794,1.13088916901578,11.1247564923057,11.5071955798649,10.1816141834184,8.27430441645564,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0.703804496655795,0.43839146485515,0.278047249225598,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,21.0289948564127,2.88132914661996,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,2.93029216480508,0,0,0,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,0.283076530788832,0,0.292255857911312,0.790575555893047,2.57057053137446,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.02131881726136,0.540183282093931,1.03486947026204,0.857348140126369,5.32020700926821,4.45922044005176,1.97458824722545,2.13125464380219,0,0,0,0,0,0.120625849856312,0.477489376012546,0.164140899745061,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0.36630324853453,0,0,19.7663144915973,20.714635642823,20.6242384838183,23.3720327987415,25.3480532315138,34.7481192799262,29.0259675099676,20.2644541450899,15.406841905463,24.8524949640874,0,0,0.341467211508268,0,0,0.367687016900028,0.222246727801615,0,0,0.758091635291392,0.25347929989024,0,0.187283014939765,0.512201219238954,0.17230640686684,0,0.115884325944855,0.38581844092741,0.412085900803307,0.588795680537589,0,0.177475806159338,0,0.436039249896986,0.188218760830661,0.507687647350059,0.365855945745545,0.526139422875686,0.679020569229309,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Rnf112 | |||
}} |
Latest revision as of 20:30, 1 October 2015
Short description: | p2@Rnf112 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnf112_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000054927, ENSMUST00000060255_5end |
EntrezGene: | Rnf112 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.19e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.19e-14 | 23 |
neuron | 3.79e-09 | 33 |
neuronal stem cell | 3.79e-09 | 33 |
neuroblast | 3.79e-09 | 33 |
electrically signaling cell | 3.79e-09 | 33 |
electrically responsive cell | 3.16e-07 | 39 |
electrically active cell | 3.16e-07 | 39 |
raphe nuclei neuron | 6.47e-07 | 3 |