FFCP PHASE1:Hg19::chr9:140033591..140033614,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:140033591..140033614,+
|short_description=p1@GRIN1
|description=CAGE_peak_1_at_GRIN1_5end
|association_with_transcript=0bp_to_NM_000832,NM_001185090,NM_001...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2902 | |EntrezGene=2902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4584 | |HGNC=4584 | ||
|TSSclassifier=strong | |||
|UniProt=Q05586,Q59GW0,Q5VSF5,Q9UPF8,Q5VSF4,Q9UPF9,A2AVK2 | |UniProt=Q05586,Q59GW0,Q5VSF5,Q9UPF8,Q5VSF4,Q9UPF9,A2AVK2 | ||
|association_with_transcript=0bp_to_NM_000832,NM_001185090,NM_001185091,NM_007327,NM_021569,uc004cli.1,uc004clj.1,uc004clk.2,uc004cll.2,uc004clm.2,uc004cln.2,uc004clo.2_5end | |||
|cluster_id=chr9:140033591..140033614,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GRIN1_5end | |||
|id=chr9:140033591..140033614,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.59e-24;82!UBERON:0006215;1.75e-09;3!UBERON:0006241;1.86e-09;3!UBERON:0003057;1.86e-09;3!UBERON:0010122;1.81e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@GRIN1 | |||
}} | }} |
Latest revision as of 15:57, 16 September 2015
Short description: | p1@GRIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRIN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_000832, NM_001185090, NM_001185091, NM_007327, NM_021569, uc004cli.1, uc004clj.1, uc004clk.2, uc004cll.2, uc004clm.2, uc004cln.2, uc004clo.2_5end |
EntrezGene: | GRIN1 |
HGNC: | 4584 |
UniProt: | Q05586Q59GW0Q5VSF5Q9UPF8Q5VSF4Q9UPF9A2AVK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data