FFCP PHASE1:Hg19::chr2:21234147..21234160,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=P04114 | |||
|association_with_transcript=-216bp_to_X03326_5end | |||
|cluster_id=chr2:21234147..21234160,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_12_at_APOB_5end | |||
|id=chr2:21234147..21234160,- | |||
|ontology_enrichment_celltype=CL:0000181!1.05e-27!12;CL:0000417!1.05e-27!12;CL:0000668!1.05e-27!12;CL:0000414!1.05e-27!12;CL:0000412!1.05e-27!12;CL:0000182!1.05e-27!12;CL:0000223!4.80e-09!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.25e-40;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.07e-40,12;CL:0000223,8.59e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.28e-30;11!UBERON:0009497;1.02e-25;13!UBERON:0001041;3.70e-11;30!UBERON:0003104;8.79e-11;31!CL:0000223;3.09e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.96e-30!19;UBERON:0006925!1.96e-30!19;UBERON:0008836!1.96e-30!19;UBERON:0008835!3.69e-26!22;UBERON:0003894!3.69e-26!22;UBERON:0009854!5.56e-25!23;UBERON:0007499!6.60e-23!25;UBERON:0009497!6.60e-23!25;UBERON:0000015!6.60e-23!25;UBERON:0002423!6.60e-23!25;UBERON:0006235!6.60e-23!25;UBERON:0004161!6.60e-23!25;UBERON:0005057!5.46e-22!26;UBERON:0009856!5.46e-22!26;UBERON:0002365!2.76e-18!31;UBERON:0002330!2.76e-18!31;UBERON:0002368!4.40e-16!35;UBERON:0003929!1.25e-15!54;UBERON:0004921!2.20e-15!129;UBERON:0004185!2.20e-15!129;UBERON:0001007!2.25e-12!155;UBERON:0001555!2.25e-12!155;UBERON:0007026!2.25e-12!155;UBERON:0000949!2.76e-12!45;UBERON:0005911!7.62e-12!82;UBERON:0002530!1.74e-11!59;UBERON:0004119!3.92e-11!169;UBERON:0000925!3.92e-11!169;UBERON:0006595!3.92e-11!169;UBERON:0005172!7.28e-10!55;UBERON:0005173!7.28e-10!55;UBERON:0002417!8.61e-09!61;UBERON:0000916!8.61e-09!61;UBERON:0000160!5.10e-08!27;UBERON:0001041!6.94e-08!98;UBERON:0005177!4.29e-07!107;UBERON:0000077!8.43e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.67e-44;19!UBERON:0006925;2.67e-44;19!UBERON:0002423;1.56e-33;25!UBERON:0002365;6.54e-26;31!UBERON:0002330;6.54e-26;31!UBERON:0002108;2.02e-24;4!UBERON:0002368;7.27e-23;33!UBERON:0000949;9.49e-17;43!UBERON:0000160;5.28e-12;17!UBERON:0001007;7.13e-12;81!UBERON:0005172;4.85e-10;52!UBERON:0005173;4.85e-10;52!UBERON:0005409;1.89e-09;22!UBERON:0002417;7.73e-09;58!UBERON:0000916;7.73e-09;58!UBERON:0002530;9.40e-09;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.60e-44,19;UBERON:0006925,2.60e-44,19;UBERON:0008836,2.60e-44,19;UBERON:0008835,3.39e-38,22;UBERON:0003894,3.39e-38,22;UBERON:0009854,1.64e-36,23;UBERON:0007499,1.52e-33,25;UBERON:0009497,1.52e-33,25;UBERON:0000015,1.52e-33,25;UBERON:0002423,1.52e-33,25;UBERON:0006235,1.52e-33,25;UBERON:0004161,1.52e-33,25;UBERON:0009856,3.13e-32,26;UBERON:0002365,6.19e-27,31;UBERON:0002330,6.19e-27,31;UBERON:0002108,2.10e-24,4;UBERON:0002368,8.77e-24,35;UBERON:0003929,4.14e-19,54;UBERON:0000949,2.39e-18,45;UBERON:0005172,3.59e-15,54;UBERON:0005173,3.59e-15,54;UBERON:0004921,9.03e-15,118;UBERON:0002530,8.01e-14,59;UBERON:0002417,1.40e-13,60;UBERON:0000916,1.40e-13,60;UBERON:0005911,2.88e-12,82;UBERON:0000160,5.44e-12,17;UBERON:0001007,8.87e-12,145;UBERON:0001555,8.87e-12,145;UBERON:0007026,8.87e-12,145;UBERON:0004119,1.52e-10,160;UBERON:0000925,1.52e-10,160;UBERON:0006595,1.52e-10,160;UBERON:0001041,4.02e-09,87;UBERON:0011216,2.08e-08,223;UBERON:0005409,2.24e-08,25;UBERON:0005177,9.62e-08,101;UBERON:0009569,6.71e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,34.2238594018943,17.6908899001973,3.54473944008842,0,1.22988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,6.69657049611401,8.90091270516598,7.27958273625197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.03450721654796,2.65013777824443,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01305622161312,4.37119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@APOB | |||
}} |
Latest revision as of 23:37, 19 September 2015
Short description: | p12@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -216bp_to_X03326_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.07e-40 | 12 |
endodermal cell | 8.59e-11 | 58 |