FFCP PHASE1:Hg19::chr2:176973275..176973300,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3236 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5133 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-217bp_to_ENST00000490088_5end | |||
|cluster_id=chr2:176973275..176973300,+ | |||
|description=CAGE_peak_4_at_HOXD10_5end | |||
|id=chr2:176973275..176973300,+ | |||
|ontology_enrichment_celltype=CL:1000449!8.42e-15!16;CL:0002681!9.59e-15!13;CL:0002584!9.59e-15!13;CL:1000497!5.77e-13!18;CL:0002518!5.77e-13!18;CL:1000507!3.27e-12!12;CL:1000494!3.27e-12!12;CL:1000612!5.83e-08!7;CL:1000746!5.83e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.09e-16;2!CL:1000500;1.09e-16;2!CL:1000618;1.09e-16;2!CL:1001318;1.09e-16;2!CL:0002173;1.09e-16;2!CL:1000746;1.23e-10;7!CL:1000612;1.23e-10;7!CL:0002553;7.97e-10;1!CL:0000669;8.37e-09;4!CL:0000333;1.43e-07;5!CL:0002537;2.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,1.23e-16,2;CL:1000500,1.23e-16,2;CL:1000618,1.23e-16,2;CL:1001318,1.23e-16,2;CL:0002173,1.23e-16,2;CL:1000746,1.23e-10,7;CL:1000612,1.23e-10,7;CL:0002553,7.98e-10,1;CL:0000669,8.89e-09,4;CL:0002537,2.07e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005795;5.37e-13;10!UBERON:0003918;8.64e-08;10!UBERON:0007687;8.64e-08;10 | |||
|ontology_enrichment_disease=DOID:171!6.58e-12!10;DOID:0060084!7.41e-11!3;DOID:127!7.41e-11!3;DOID:0060072!3.09e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:171;2.32e-13;10!DOID:0060084;1.92e-11;3!DOID:127;1.92e-11;3!DOID:0060072;8.37e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.22e-13,10;DOID:0060084,1.51e-11,3;DOID:127,1.51e-11,3;DOID:0060072,7.00e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002113!9.81e-18!27;UBERON:0003918!9.81e-18!27;UBERON:0005095!9.81e-18!27;UBERON:0007687!9.81e-18!27;UBERON:0004211!8.42e-15!16;UBERON:0001285!8.42e-15!16;UBERON:0007684!8.42e-15!16;UBERON:0003220!8.42e-15!16;UBERON:0004208!8.42e-15!16;UBERON:0001225!9.59e-15!13;UBERON:0008987!9.59e-15!13;UBERON:0000489!1.75e-14!32;UBERON:0006555!7.89e-14!17;UBERON:0005103!7.89e-14!17;UBERON:0000083!7.89e-14!17;UBERON:0009201!7.89e-14!17;UBERON:0004819!7.89e-14!17;UBERON:0006553!7.89e-14!17;UBERON:0003074!7.89e-14!17;UBERON:0003060!7.89e-14!17;UBERON:0000080!5.77e-13!18;UBERON:0002120!5.77e-13!18;UBERON:0004875!5.77e-13!18;UBERON:0005721!5.77e-13!18;UBERON:0005754!5.77e-13!18;UBERON:0007297!5.77e-13!18;UBERON:0009773!3.27e-12!12;UBERON:0001231!3.27e-12!12;UBERON:0004810!3.27e-12!12;UBERON:0001851!1.01e-11!16;UBERON:0004876!1.69e-11!20;UBERON:0000353!5.96e-11!17;UBERON:0003887!7.18e-11!21;UBERON:0006554!1.00e-09!44;UBERON:0001008!1.92e-09!45;UBERON:0000058!1.85e-08!26;UBERON:0000074!5.83e-08!7;UBERON:0001229!5.83e-08!7;UBERON:0001230!5.83e-08!7;UBERON:0005749!5.83e-08!7;UBERON:0004199!5.83e-08!7;UBERON:0004209!5.83e-08!7;UBERON:0004198!5.83e-08!7;UBERON:0005172!3.23e-07!55;UBERON:0005173!3.23e-07!55;UBERON:0000013!7.20e-07!5;UBERON:0002410!7.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;1.09e-16;2!UBERON:0003838;1.09e-16;2!UBERON:0003586;1.09e-16;2!UBERON:0005169;1.09e-16;2!UBERON:0002321;1.09e-16;2!UBERON:0005215;1.09e-16;2!UBERON:0002303;1.09e-16;2!UBERON:0002319;1.09e-16;2!UBERON:0002050;2.67e-15;5!UBERON:0005423;2.67e-15;5!UBERON:0002113;1.95e-11;24!UBERON:0011143;1.95e-11;24!UBERON:0000074;1.23e-10;7!UBERON:0001229;1.23e-10;7!UBERON:0005795;1.26e-09;1!UBERON:0000489;2.21e-09;29!UBERON:0006834;2.55e-09;1!UBERON:0002346;4.51e-09;4!UBERON:0000923;4.51e-09;4!UBERON:0010316;4.51e-09;4!UBERON:0005291;4.51e-09;4!UBERON:0006554;4.70e-09;30!UBERON:0001008;4.70e-09;30!UBERON:0003891;8.37e-09;4!UBERON:0000995;1.12e-07;17!UBERON:0000013;1.43e-07;5!UBERON:0002410;1.43e-07;5!UBERON:0003975;2.94e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,1.23e-16,2;UBERON:0003838,1.23e-16,2;UBERON:0003586,1.23e-16,2;UBERON:0005169,1.23e-16,2;UBERON:0002321,1.23e-16,2;UBERON:0005215,1.23e-16,2;UBERON:0002303,1.23e-16,2;UBERON:0002319,1.23e-16,2;UBERON:0010532,1.23e-10,7;UBERON:0000074,1.23e-10,7;UBERON:0001229,1.23e-10,7;UBERON:0001230,1.23e-10,7;UBERON:0003220,1.23e-10,7;UBERON:0005749,1.23e-10,7;UBERON:0004199,1.23e-10,7;UBERON:0004209,1.23e-10,7;UBERON:0004198,1.23e-10,7;UBERON:0002113,1.68e-10,26;UBERON:0003918,1.68e-10,26;UBERON:0011143,1.68e-10,26;UBERON:0005095,1.68e-10,26;UBERON:0007687,1.68e-10,26;UBERON:0005103,2.27e-09,8;UBERON:0000083,2.27e-09,8;UBERON:0009201,2.27e-09,8;UBERON:0006553,2.27e-09,8;UBERON:0003074,2.27e-09,8;UBERON:0003060,2.27e-09,8;UBERON:0006834,2.77e-09,1;UBERON:0005795,5.64e-09,22;UBERON:0003891,8.89e-09,4;UBERON:0000489,9.90e-09,31;UBERON:0000080,2.20e-08,9;UBERON:0002120,2.20e-08,9;UBERON:0004875,2.20e-08,9;UBERON:0005721,2.20e-08,9;UBERON:0005754,2.20e-08,9;UBERON:0007297,2.20e-08,9;UBERON:0000013,1.36e-07,5;UBERON:0002410,1.36e-07,5;UBERON:0004876,6.05e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0.640672166455702,0,0,0,0,0,0,0,0.252433774244115,0.368199594569197,0,0.710019185033229,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39344304926383,4.16029747645464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,1.29058417979192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.527758144464379,0,0,0.647747748306418,1.54227252690289,1.35473218771926,2.00675909541941,0.254876273045038,0,0.895499018888713,0,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.56440581657396,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,3.42171031610916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10327990218877,4.51109457960984,0,0,0,0,0,0,0.542999601753713,1.72844298240254,2.61269888087527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5652351854352,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17559094704073,4.560712313821,0,0.33946505990805,3.61377364172861,3.09839410647505,0.558644917973244,0,0,17.6125564622803,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.27515248846948,0,0,0,0,7.85006786546702,0,0,2.82190377816914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32258743947446,4.06896178315738,0,0,0 | |||
|short_description=p4@HOXD10 | |||
}} |
Latest revision as of 08:52, 18 September 2015
Short description: | p4@HOXD10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXD10_5end |
Coexpression cluster: | NA |
Association with transcript: | -217bp_to_ENST00000490088_5end |
EntrezGene: | HOXD10 |
HGNC: | 5133 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 1.23e-16 | 2 |
kidney interstitial cell | 1.23e-16 | 2 |
juxtaglomerular complex cell | 1.23e-16 | 2 |
renal interstitial pericyte | 1.23e-16 | 2 |
extraglomerular mesangial cell | 1.23e-16 | 2 |
glomerular cell | 1.23e-10 | 7 |
kidney corpuscule cell | 1.23e-10 | 7 |
lung fibroblast | 7.98e-10 | 1 |
pericyte cell | 8.89e-09 | 4 |
amnion mesenchymal stem cell | 2.07e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.22e-13 | 10 |
cell type benign neoplasm | 1.51e-11 | 3 |
leiomyoma | 1.51e-11 | 3 |
benign neoplasm | 7.00e-09 | 4 |