FFCP PHASE1:Hg19::chr9:130877529..130877536,-: Difference between revisions
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|id=chr9:130877529..130877536,-
|short_description=p@chr9:130877529..130877536,-
|description=CAGE_peak_at_chr9:130877529..130877536,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:130877529..130877536,- | |||
|coexpression_cluster_id=C1339 | |||
|description=CAGE_peak_at_chr9:130877529..130877536,- | |||
|id=chr9:130877529..130877536,- | |||
|ontology_enrichment_celltype=CL:0002178!1.73e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.51e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!3.74e-14!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.39e-44;2!DOID:3119;2.90e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.39e-44,2;DOID:3119,3.04e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005409!8.64e-20!35;UBERON:0000160!8.96e-14!27;UBERON:0001155!5.75e-12!9;UBERON:0000059!8.29e-10!11;UBERON:0004921!4.87e-08!129;UBERON:0004185!4.87e-08!129;UBERON:0001154!7.76e-08!1;UBERON:0001153!7.76e-08!1;UBERON:0000945!8.63e-08!8;UBERON:0010039!8.63e-08!8;UBERON:0002038!2.17e-07!1;UBERON:0009661!2.17e-07!1;UBERON:0004119!2.40e-07!169;UBERON:0000925!2.40e-07!169;UBERON:0006595!2.40e-07!169;UBERON:0001007!3.07e-07!155;UBERON:0001555!3.07e-07!155;UBERON:0007026!3.07e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.72e-46;22!UBERON:0000160;9.37e-31;17!UBERON:0004921;1.56e-28;33!UBERON:0001155;9.35e-23;9!UBERON:0000059;9.20e-19;11!UBERON:0002108;1.29e-18;4!UBERON:0000945;1.93e-18;5!UBERON:0010039;1.93e-18;5!UBERON:0001555;1.31e-11;54!UBERON:0002114;1.30e-08;2!UBERON:0001041;3.34e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.42e-41,25;UBERON:0000160,9.09e-31,17;UBERON:0001155,8.69e-23,9;UBERON:0000059,8.66e-19,11;UBERON:0002108,1.35e-18,4;UBERON:0000945,7.68e-12,8;UBERON:0010039,7.68e-12,8;UBERON:0004921,6.31e-09,118;UBERON:0002114,1.21e-08,2;UBERON:0001007,3.12e-07,145;UBERON:0001555,3.12e-07,145;UBERON:0007026,3.12e-07,145 | |||
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|short_description=p@chr9:130877529..130877536,- | |||
}} | }} |
Latest revision as of 23:06, 31 July 2015
Short description: | p@chr9:130877529..130877536, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130877529..130877536, - |
Coexpression cluster: | C1339_small_colon_signet_trachea_gall_adenocarcinoma_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.42e-41 | 25 |
intestine | 9.09e-31 | 17 |
colon | 8.69e-23 | 9 |
large intestine | 8.66e-19 | 11 |
small intestine | 1.35e-18 | 4 |
stomach | 7.68e-12 | 8 |
food storage organ | 7.68e-12 | 8 |
subdivision of digestive tract | 6.31e-09 | 118 |
duodenum | 1.21e-08 | 2 |
digestive system | 3.12e-07 | 145 |
digestive tract | 3.12e-07 | 145 |
primitive gut | 3.12e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.39e-44 | 2 |
gastrointestinal system cancer | 3.04e-07 | 14 |