FFCP PHASE1:Hg19::chr22:45939339..45939352,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr22:45939339..45939352,+ | |||
|coexpression_cluster_id=C518 | |||
|description=CAGE_peak_at_chr22:45939339..45939352,+ | |||
|id=chr22:45939339..45939352,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.80e-12!180;CL:0000057!1.12e-10!75;CL:0002620!1.12e-07!23;CL:0000133!3.21e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.59e-11;3!CL:0000388;2.59e-11;3!CL:0002559;4.08e-11;5!CL:0002622;6.75e-11;3!CL:0002564;2.42e-10;3!CL:0000499;3.46e-10;28!CL:0000197;9.40e-09;6!CL:0000098;9.40e-09;6!CL:0002167;9.40e-09;6!CL:0002561;2.21e-08;2!CL:0002600;9.13e-08;2!CL:0002575;1.45e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.44e-11,3;CL:0000388,2.44e-11,3;CL:0002559,3.48e-11,5;CL:0002622,6.93e-11,3;CL:0000499,3.74e-10,28;CL:0002564,8.07e-10,3;CL:0000197,1.12e-08,6;CL:0000098,1.12e-08,6;CL:0002167,1.12e-08,6;CL:0002561,2.26e-08,2;CL:0002575,1.24e-07,2;CL:0002600,1.24e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;3.27e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!9.09e-09!95;UBERON:0001737!1.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;1.85e-14;8!UBERON:0000982;1.85e-14;8!UBERON:0004770;1.85e-14;8!UBERON:0007846;2.59e-11;3!UBERON:0000043;2.59e-11;3!UBERON:0007845;2.59e-11;3!UBERON:0002073;4.08e-11;5!UBERON:0011135;1.70e-10;5!UBERON:0002216;1.70e-10;5!UBERON:0011134;1.70e-10;5!UBERON:0002209;1.70e-10;5!UBERON:0002213;1.70e-10;5!UBERON:0007844;1.70e-10;5!UBERON:0011138;1.70e-10;5!UBERON:0001130;1.70e-10;5!UBERON:0001066;1.70e-10;5!UBERON:0001468;1.70e-10;5!UBERON:0002242;2.42e-10;3!UBERON:0001737;1.71e-08;9!UBERON:0001557;1.71e-08;9!UBERON:0005933;2.21e-08;2!UBERON:0005942;2.21e-08;2!UBERON:0005932;2.21e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,6.42e-14,8;UBERON:0000982,6.42e-14,8;UBERON:0004770,6.42e-14,8;UBERON:0007846,2.44e-11,3;UBERON:0000043,2.44e-11,3;UBERON:0007845,2.44e-11,3;UBERON:0002073,3.48e-11,5;UBERON:0005086,3.48e-11,5;UBERON:0011135,6.24e-10,5;UBERON:0002216,6.24e-10,5;UBERON:0011134,6.24e-10,5;UBERON:0002209,6.24e-10,5;UBERON:0002213,6.24e-10,5;UBERON:0005856,6.24e-10,5;UBERON:0005866,6.24e-10,5;UBERON:0005863,6.24e-10,5;UBERON:0007844,6.24e-10,5;UBERON:0011138,6.24e-10,5;UBERON:0001130,6.24e-10,5;UBERON:0001066,6.24e-10,5;UBERON:0001468,6.24e-10,5;UBERON:0002242,8.07e-10,3;UBERON:0003068,8.07e-10,3;UBERON:0002328,8.07e-10,3;UBERON:0004880,8.07e-10,3;UBERON:0001737,1.60e-08,9;UBERON:0005933,2.26e-08,2;UBERON:0005942,2.26e-08,2;UBERON:0005932,2.26e-08,2 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,2.00146596706261,0.446961094427288,1.74467704820074,5.06599756336621,0.631719873426831,2.61185628199839,0,0,0,0,1.11389717664042,0.331397375727916,0,0.602694528023977,0,0,0.492484232307152,0.816002764977012,0,0.286235987131057,0.410623275218653,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.869079113764942,0,0,0.189069634328136,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,3.72887606973458,0,0,0,0,0,0,0,0.151357427644931,0,0.937285727335186,0.936480230490962,0.570471821544449,2.09228152772521,0.469737994575059,0.323745888736263,0.280901613404497,0.61246251376468,0.737005903870608,0.929932030581889,0,2.47266929278557,0,0.718618141816238,0,0.375355559615893,0.277064115484183,0.438977620880838,0,0.45071417671979,0,0.179389635688862,0.427114777637135,0.423863802319124,0.900273288253207,0.309157587715317,0.257640540045629,0.744467425326359,0,0,0.252433774244115,0.368199594569197,4.20279747728911,0,0.302256294682921,0.339121184620975,0,0,0,0,0.265059536642971,0.464775771478074,0.10366105501537,0.252320850875628,0,1.56449532329816,1.28648187638577,0,6.03678306441573,5.77503585335668,1.53798840051797,1.01150814046861,1.44606617930089,0.992645754591546,1.74303555273925,0.237270619111097,1.21348177344148,0.98110732562673,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.860919069801795,0.686271241194102,0,0,0,0,0.651616610620649,1.03993478527958,1.44331342025273,0.579652024875384,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0.897048674762886,0,0.51336800074665,0,10.7296933755565,0,0,0,0.257207374262142,0,0,0.57191197463259,1.62786481617433,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,1.91381625495949,0,0,0,2.08575535922538,1.00034104211935,1.08506009479894,1.45579603071565,2.14114786556594,1.26161932027148,1.17141414992713,0.300946099727719,0,4.1389228517002,0,0.184369168541703,1.12948698808508,1.56640925970192,2.05886054286514,0,0,0,0,0,1.20956117331872,0.248107807818777,0.153461973288062,0.841980283299221,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.483437798366489,0,0.0920809889358963,1.26295892981067,2.36718518408732,5.90059867317409,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,1.13345112812495,0,0.082509499920588,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0.290033387828457,0.340906509664404,0.0890320356467374,0,0.192190067365106,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0,0,1.28381696410176,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0,0,0,0,0,0,0.545999645631943,0.989838023675989,0,0,0,0,1.15755106853338,5.9030527684197,0,0,0,0.143411352204052,0.294747123039363,0,0.354761064070598,3.16661452946496,3.29294892959902,0,0.349934720244983,0,0,0,0.753150406214233,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,1.59398390600856,0.552567831062295,0,0,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0.438770794307945,0.10893846351899,0,1.30815439456455,0,0,0.359030577639089,0.217294743844016,0.638002319463839,0.641183153813036,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0.104421949505455,0.202203398942031,1.60515529459758,0,0,0,0,0.394584402849391,0,0.30607276163049,0.758238955541855,0,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0,0.873633341210151,0,0.0967563312890851,0,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0.160317640503067,0.85381197895741,0,0,0,0,0,0.124252535565433,0.707082103850386,0.135904206073614,0.209205692624666,0,0.288950589901519,0,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0.134366944973453,0,0,0.0787831823072236,0.412079291905832,0.202210631562555,0,0,0,0.136203406111576,0.803765742325096,0.275078873194468,0.83088067605837,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.221858103073705,0.0620964029413835,0.138348634936231,0.249960815924213,0,0,0,0,0,0.447764408660622,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.228840068396924,1.20984739010591,0.31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| |||
|short_description=p@chr22:45939339..45939352,+ | |||
}} |
Latest revision as of 22:04, 28 July 2015
Short description: | p@chr22:45939339..45939352, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45939339..45939352, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.44e-11 | 3 |
tendon cell | 2.44e-11 | 3 |
hair follicle cell | 3.48e-11 | 5 |
prostate stromal cell | 6.93e-11 | 3 |
stromal cell | 3.74e-10 | 28 |
nucleus pulposus cell of intervertebral disc | 8.07e-10 | 3 |
receptor cell | 1.12e-08 | 6 |
sensory epithelial cell | 1.12e-08 | 6 |
olfactory epithelial cell | 1.12e-08 | 6 |
outer root sheath cell | 2.26e-08 | 2 |
central nervous system pericyte | 1.24e-07 | 2 |
smooth muscle cell of trachea | 1.24e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
articulation | 6.42e-14 | 8 |
skeletal joint | 6.42e-14 | 8 |
articular system | 6.42e-14 | 8 |
dense regular connective tissue | 2.44e-11 | 3 |
tendon | 2.44e-11 | 3 |
regular connective tissue | 2.44e-11 | 3 |
hair follicle | 3.48e-11 | 5 |
hair follicle placode | 3.48e-11 | 5 |
intervertebral cartilage | 6.24e-10 | 5 |
symphysis | 6.24e-10 | 5 |
nonsynovial joint | 6.24e-10 | 5 |
fibrous joint | 6.24e-10 | 5 |
cartilaginous joint | 6.24e-10 | 5 |
developing mesenchymal condensation | 6.24e-10 | 5 |
pre-cartilage condensation | 6.24e-10 | 5 |
cartilaginous condensation | 6.24e-10 | 5 |
cartilage element | 6.24e-10 | 5 |
post-cranial axial skeletal system | 6.24e-10 | 5 |
vertebral column | 6.24e-10 | 5 |
intervertebral disk | 6.24e-10 | 5 |
intervertebral joint | 6.24e-10 | 5 |
nucleus pulposus | 8.07e-10 | 3 |
axial mesoderm | 8.07e-10 | 3 |
notochord | 8.07e-10 | 3 |
chordamesoderm | 8.07e-10 | 3 |
larynx | 1.60e-08 | 9 |
hair root sheath | 2.26e-08 | 2 |
hair outer root sheath | 2.26e-08 | 2 |
bulb of hair follicle | 2.26e-08 | 2 |