FFCP PHASE1:Hg19::chr21:39705383..39705394,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-40bp_to_ENST00000436845_5end | |||
|cluster_id=chr21:39705383..39705394,- | |||
|coexpression_cluster_id=C2632 | |||
|description=CAGE_peak_1_at_ENST00000436845_5end | |||
|id=chr21:39705383..39705394,- | |||
|ontology_enrichment_celltype=CL:0000188!3.39e-14!9;CL:0000135!3.29e-12!3;CL:0000386!3.29e-12!3;CL:0000388!3.29e-12!3;CL:0002564!3.96e-12!3;CL:0000499!7.62e-12!27;CL:0000153!3.31e-10!9;CL:0000447!3.31e-10!9;CL:0002602!1.11e-08!2;CL:0002320!3.97e-07!365;CL:0000048!8.77e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002602;7.62e-24;2!CL:0002540;1.29e-18;6!CL:0000135;5.98e-17;3!CL:0000388;5.98e-17;3!CL:0000214;7.90e-17;3!CL:0002564;1.32e-16;3!CL:0000153;2.36e-12;9!CL:0000447;2.36e-12;9!CL:0002092;2.07e-11;10!CL:0000499;1.63e-10;28!CL:0000327;1.26e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,6.77e-24,2;CL:0002540,1.29e-18,6;CL:0000135,5.75e-17,3;CL:0000388,5.75e-17,3;CL:0000214,7.90e-17,3;CL:0002564,1.27e-16,3;CL:0000153,2.60e-12,9;CL:0000447,2.60e-12,9;CL:0002092,2.07e-11,10;CL:0000499,1.70e-10,28;CL:0000327,1.34e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004905!9.74e-13!5;UBERON:0000982!9.74e-13!5;UBERON:0004770!9.74e-13!5;UBERON:0000043!3.29e-12!3;UBERON:0002242!3.96e-12!3;UBERON:0003068!3.96e-12!3;UBERON:0002328!3.96e-12!3;UBERON:0004880!3.96e-12!3;UBERON:0002204!4.68e-10!167;UBERON:0009568!1.11e-08!2;UBERON:0002216!1.11e-08!2;UBERON:0002209!1.11e-08!2;UBERON:0002213!1.11e-08!2;UBERON:0004267!1.11e-08!2;UBERON:0006444!1.11e-08!2;UBERON:0001995!1.11e-08!2;UBERON:0004715!1.11e-08!2;UBERON:0001468!1.11e-08!2;UBERON:0001130!1.11e-08!2;UBERON:0001066!1.11e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;6.15e-52;8!UBERON:0000982;6.15e-52;8!UBERON:0004770;6.15e-52;8!UBERON:0011135;3.40e-37;5!UBERON:0002216;3.40e-37;5!UBERON:0011134;3.40e-37;5!UBERON:0002209;3.40e-37;5!UBERON:0002213;3.40e-37;5!UBERON:0007844;3.40e-37;5!UBERON:0011138;3.40e-37;5!UBERON:0001130;3.40e-37;5!UBERON:0001066;3.40e-37;5!UBERON:0001468;3.40e-37;5!UBERON:0006444;7.62e-24;2!UBERON:0001995;7.62e-24;2!UBERON:0004715;7.62e-24;2!UBERON:0004765;1.57e-21;26!UBERON:0001434;6.27e-18;36!UBERON:0007846;5.98e-17;3!UBERON:0000043;5.98e-17;3!UBERON:0007845;5.98e-17;3!UBERON:0006915;7.90e-17;3!UBERON:0007616;7.90e-17;3!UBERON:0002217;7.90e-17;3!UBERON:0002018;7.90e-17;3!UBERON:0002242;1.32e-16;3!UBERON:0002418;3.01e-16;3!UBERON:0004755;3.01e-16;3!UBERON:0002204;4.41e-16;70!UBERON:0000075;7.36e-12;16!UBERON:0002371;1.34e-09;12!UBERON:0001134;4.42e-07;16!UBERON:0002036;4.42e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004905,5.39e-52,8;UBERON:0000982,5.39e-52,8;UBERON:0004770,5.39e-52,8;UBERON:0011135,2.96e-37,5;UBERON:0002216,2.96e-37,5;UBERON:0011134,2.96e-37,5;UBERON:0002209,2.96e-37,5;UBERON:0002213,2.96e-37,5;UBERON:0005856,2.96e-37,5;UBERON:0005866,2.96e-37,5;UBERON:0005863,2.96e-37,5;UBERON:0007844,2.96e-37,5;UBERON:0011138,2.96e-37,5;UBERON:0001130,2.96e-37,5;UBERON:0001066,2.96e-37,5;UBERON:0001468,2.96e-37,5;UBERON:0006444,6.77e-24,2;UBERON:0001995,6.77e-24,2;UBERON:0004715,6.77e-24,2;UBERON:0007846,5.75e-17,3;UBERON:0000043,5.75e-17,3;UBERON:0007845,5.75e-17,3;UBERON:0006915,7.90e-17,3;UBERON:0007616,7.90e-17,3;UBERON:0002217,7.90e-17,3;UBERON:0002018,7.90e-17,3;UBERON:0002242,1.27e-16,3;UBERON:0003068,1.27e-16,3;UBERON:0002328,1.27e-16,3;UBERON:0004880,1.27e-16,3;UBERON:0002418,2.78e-16,3;UBERON:0004755,2.78e-16,3;UBERON:0002204,6.84e-12,167;UBERON:0000075,7.05e-12,16;UBERON:0001434,2.23e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.23766352960047,1.32558950291166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0,0.709446689665756,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18997878469764,2.00068208423871,0.542530047399471,0,0,0,0,3.00946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.574890092096664,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0934629853479,0.308097234229289,0.307007349452259,0,0.537101224341368,0.725083469571143,0,1.33548053470106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,17.1233344339149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.7125382426541,17.3581852209277,10.6777346591584,0,0,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0.363697318405119,0,0,0,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7638156721698,8.78133694399695,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.404234377916439,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000436845 | |||
}} |
Latest revision as of 17:52, 28 July 2015
Short description: | p1@ENST00000436845 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000436845_5end |
Coexpression cluster: | C2632_Synoviocyte_mesenchymal_tenocyte_thyroid_Nucleus_Skeletal_Myoblast |
Association with transcript: | -40bp_to_ENST00000436845_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 6.77e-24 | 2 |
mesenchymal stem cell of the bone marrow | 1.29e-18 | 6 |
fibrocyte | 5.75e-17 | 3 |
tendon cell | 5.75e-17 | 3 |
synovial cell | 7.90e-17 | 3 |
nucleus pulposus cell of intervertebral disc | 1.27e-16 | 3 |
GAG secreting cell | 2.60e-12 | 9 |
carbohydrate secreting cell | 2.60e-12 | 9 |
bone marrow cell | 2.07e-11 | 10 |
stromal cell | 1.70e-10 | 28 |
extracellular matrix secreting cell | 1.34e-07 | 15 |