FFCP PHASE1:Hg19::chr1:42846504..42846513,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284716 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28725 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IXN7 | |||
|association_with_transcript=27bp_to_ENST00000431473_5end | |||
|cluster_id=chr1:42846504..42846513,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RIMKLA_5end | |||
|id=chr1:42846504..42846513,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.59e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.66e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.21e-43!57;UBERON:0005068!2.21e-43!57;UBERON:0006241!2.21e-43!57;UBERON:0007135!2.21e-43!57;UBERON:0001017!4.33e-41!82;UBERON:0005743!1.89e-40!86;UBERON:0000073!7.05e-39!94;UBERON:0001016!7.05e-39!94;UBERON:0002616!1.49e-36!59;UBERON:0002020!9.64e-36!34;UBERON:0003528!9.64e-36!34;UBERON:0001893!2.51e-35!34;UBERON:0001869!2.56e-35!32;UBERON:0000955!3.67e-35!69;UBERON:0006238!3.67e-35!69;UBERON:0002619!1.64e-33!22;UBERON:0002791!2.17e-33!33;UBERON:0002780!7.60e-33!41;UBERON:0001890!7.60e-33!41;UBERON:0006240!7.60e-33!41;UBERON:0003080!7.17e-32!42;UBERON:0001950!4.78e-30!20;UBERON:0003075!1.37e-29!86;UBERON:0007284!1.37e-29!86;UBERON:0000956!6.67e-29!25;UBERON:0000203!6.67e-29!25;UBERON:0002346!9.82e-28!90;UBERON:0007023!2.13e-23!115;UBERON:0003056!5.84e-21!61;UBERON:0000033!3.92e-18!123;UBERON:0004121!1.69e-17!169;UBERON:0000924!8.83e-17!173;UBERON:0006601!8.83e-17!173;UBERON:0000153!9.45e-17!129;UBERON:0007811!9.45e-17!129;UBERON:0000200!6.49e-13!6;UBERON:0001871!1.68e-12!7;UBERON:0003076!2.42e-12!15;UBERON:0003057!2.42e-12!15;UBERON:0001872!2.16e-11!5;UBERON:0000349!6.77e-11!5;UBERON:0000025!1.20e-10!194;UBERON:0004733!4.44e-10!12;UBERON:0002028!4.44e-10!12;UBERON:0007277!4.44e-10!12;UBERON:0004732!3.53e-09!13;UBERON:0002308!2.36e-08!9;UBERON:0000125!2.36e-08!9;UBERON:0002420!2.55e-08!9;UBERON:0007245!2.55e-08!9;UBERON:0010009!2.55e-08!9;UBERON:0010011!2.55e-08!9;UBERON:0000454!2.55e-08!9;UBERON:0002680!2.87e-08!9;UBERON:0001895!2.87e-08!9;UBERON:0010092!2.87e-08!9;UBERON:0004111!6.65e-08!241;UBERON:0000064!9.45e-08!219;UBERON:0000988!1.48e-07!3;UBERON:0000483!5.97e-07!309;UBERON:0002771!8.42e-07!3;UBERON:0000119!9.26e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.21e-26;20!UBERON:0002619;2.76e-24;22!UBERON:0001869;3.76e-24;32!UBERON:0001893;3.41e-23;34!UBERON:0003528;5.32e-22;34!UBERON:0002020;5.32e-22;34!UBERON:0000956;2.00e-21;25!UBERON:0000203;2.00e-21;25!UBERON:0002791;6.29e-20;32!UBERON:0000988;1.37e-16;3!UBERON:0002780;4.36e-16;41!UBERON:0001890;4.36e-16;41!UBERON:0001017;6.04e-15;75!UBERON:0002581;4.48e-13;1!UBERON:0002902;4.48e-13;1!UBERON:0009899;4.48e-13;1!UBERON:0007190;4.48e-13;1!UBERON:0001016;5.65e-13;83!UBERON:0000073;2.07e-12;53!UBERON:0002616;2.07e-12;53!UBERON:0002680;2.55e-12;9!UBERON:0001895;2.55e-12;9!UBERON:0000955;3.07e-12;68!UBERON:0001872;2.46e-10;5!UBERON:0002021;2.46e-10;5!UBERON:0004733;2.22e-09;12!UBERON:0002028;2.22e-09;12!UBERON:0000200;9.25e-09;6!UBERON:0002298;9.25e-09;6!UBERON:0004732;1.07e-08;13!UBERON:0001871;1.25e-07;6!UBERON:0001876;3.59e-07;2!UBERON:0002148;3.59e-07;2!UBERON:0001875;3.59e-07;2!UBERON:0006331;3.59e-07;2!UBERON:0009662;3.59e-07;2!UBERON:0006514;3.59e-07;2!UBERON:0007023;8.77e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.94e-33,56;UBERON:0005068,6.94e-33,56;UBERON:0006241,6.94e-33,56;UBERON:0007135,6.94e-33,56;UBERON:0001017,7.57e-30,81;UBERON:0000073,1.76e-29,53;UBERON:0002616,1.76e-29,53;UBERON:0001869,1.42e-27,32;UBERON:0001016,9.38e-27,89;UBERON:0001950,1.40e-26,20;UBERON:0000955,1.63e-26,68;UBERON:0006238,1.63e-26,68;UBERON:0001893,6.05e-26,34;UBERON:0003528,7.45e-26,34;UBERON:0002020,7.45e-26,34;UBERON:0002619,3.15e-24,22;UBERON:0003075,4.41e-22,82;UBERON:0007284,4.41e-22,82;UBERON:0002791,9.94e-22,32;UBERON:0002780,1.84e-21,41;UBERON:0001890,1.84e-21,41;UBERON:0003080,1.84e-21,41;UBERON:0006240,1.84e-21,41;UBERON:0000956,2.24e-21,25;UBERON:0000203,2.24e-21,25;UBERON:0002346,5.44e-21,86;UBERON:0010371,4.18e-17,104;UBERON:0000988,2.38e-16,3;UBERON:0007023,1.23e-15,114;UBERON:0003056,3.28e-14,61;UBERON:0007190,2.06e-13,1;UBERON:0004121,2.93e-13,171;UBERON:0000924,2.93e-13,171;UBERON:0006601,2.93e-13,171;UBERON:0002581,3.76e-13,1;UBERON:0010314,3.85e-13,132;UBERON:0002902,8.64e-13,1;UBERON:0009899,8.64e-13,1;UBERON:0003076,8.72e-13,15;UBERON:0003057,8.72e-13,15;UBERON:0002680,2.92e-12,9;UBERON:0001895,2.92e-12,9;UBERON:0010092,2.92e-12,9;UBERON:0001872,1.86e-10,5;UBERON:0002021,3.42e-10,5;UBERON:0011216,1.08e-09,223;UBERON:0004733,2.46e-09,12;UBERON:0002028,2.46e-09,12;UBERON:0007277,2.46e-09,12;UBERON:0000200,6.77e-09,6;UBERON:0004732,1.17e-08,13;UBERON:0002298,1.22e-08,6;UBERON:0000025,1.71e-08,192;UBERON:0001871,1.06e-07,6;UBERON:0001876,2.28e-07,2;UBERON:0002148,3.70e-07,2;UBERON:0006331,3.70e-07,2;UBERON:0009662,3.70e-07,2;UBERON:0001875,4.42e-07,2;UBERON:0006514,4.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.222886768554957,0,0,0,0,1.9882952955326,0.422008249231538,0,0.329607748453519,0,0,0,0.755798243562828,0,0,0,0,0,0,0,0,0,2.90799823828566,0.649376687132959,0,0,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,1.52581736317083,0.331737779793674,0.295547618953547,0.438770794307945,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0.995261931078505,0,0.611030144933625,0,0,0,0.067401132980677,0,0.937057782901357,0.182454789215666,0,0,0,0,0.61214552326098,0.063186579628488,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0,0,0.288180834308212,0.343609788497747,0.686379991447858,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0,0.295282444544246,0,0.795229689809303,0.272406812223151,0,0,0.415440338029185,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.66116300871345,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.854183854313742,0.751145584238999,0,0.110929051536852,0.496771223531068,0.138348634936231,0,0,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0.218419276384028,0,0,0,0,0,0.157723490002507,0.80057074828547,0,0,0.899209151350433,0,0.638535436228605,1.23069818544453,0,1.03735878696327,0.968853873791107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82351478469666,0.781078098613847,0.826747186004736,1.58539525484767,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,1.01954599465248,1.38122824481983,0.236387681767936,0.222462803784138,0,0.628462359664008,0,0,0,0.47775168788705,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.596852325484105,0,0,0.439762066981716,0.150962843566674,0,0,1.41095188908457,0,0.471353094203252,0.392616934229891,0,1.6906229103336,0,0,0,0,0,0,0,0,0,0,0,1.22384682343646,0,0,0,0,0,0.126166424835079,0,0,0.305966489225945,0,0,0.250707539292375,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@RIMKLA | |||
}} |
Latest revision as of 03:12, 18 September 2015
Short description: | p3@RIMKLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RIMKLA_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 27bp_to_ENST00000431473_5end |
EntrezGene: | RIMKLA |
HGNC: | 28725 |
UniProt: | Q8IXN7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data