FFCP PHASE1:Hg19::chr1:218518858..218518869,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11768 | |||
|TSSclassifier=strong | |||
|UniProt=P61812 | |||
|association_with_transcript=182bp_to_NM_001135599,NM_003238_5end | |||
|cluster_id=chr1:218518858..218518869,+ | |||
|coexpression_cluster_id=C2566 | |||
|description=CAGE_peak_21_at_TGFB2_5end | |||
|id=chr1:218518858..218518869,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.49e-07!15;CL:0000125!1.49e-07!15;CL:0000030!1.49e-07!15;CL:0000339!1.49e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.74e-16;3!CL:0000067;1.74e-16;3!CL:0005012;1.74e-16;3!CL:0002304;1.74e-16;3!CL:0000306;4.77e-13;4!CL:0002222;4.77e-13;4!CL:0002224;4.77e-13;4!CL:1000415;2.15e-07;2!CL:0000075;2.93e-07;27!CL:0000054;3.92e-07;2!CL:0002575;3.92e-07;2!CL:0000137;3.92e-07;2!CL:0000092;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,7.30e-17,3;CL:0000067,7.30e-17,3;CL:0005012,7.30e-17,3;CL:0002304,7.30e-17,3;CL:0000306,4.78e-13,4;CL:0002222,4.78e-13,4;CL:0002224,4.78e-13,4;CL:1000415,2.15e-07,2;CL:0000075,2.44e-07,27;CL:0002575,3.28e-07,2;CL:0000054,3.93e-07,2;CL:0000137,3.93e-07,2;CL:0000092,3.93e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;3.92e-07;2!DOID:4305;3.92e-07;2!DOID:4929;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,3.93e-07,2;DOID:4305,3.93e-07,2;DOID:4929,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000955!1.02e-16!69;UBERON:0006238!1.02e-16!69;UBERON:0003075!4.65e-16!86;UBERON:0007284!4.65e-16!86;UBERON:0001017!1.38e-15!82;UBERON:0002346!1.44e-15!90;UBERON:0000119!5.37e-15!312;UBERON:0000033!8.92e-15!123;UBERON:0002616!1.37e-14!59;UBERON:0000483!2.33e-14!309;UBERON:0005743!3.06e-14!86;UBERON:0001049!3.63e-14!57;UBERON:0005068!3.63e-14!57;UBERON:0006241!3.63e-14!57;UBERON:0007135!3.63e-14!57;UBERON:0000153!2.55e-13!129;UBERON:0007811!2.55e-13!129;UBERON:0000073!3.33e-13!94;UBERON:0001016!3.33e-13!94;UBERON:0000025!1.25e-12!194;UBERON:0000477!2.60e-12!286;UBERON:0004111!8.64e-12!241;UBERON:0003056!1.12e-11!61;UBERON:0001893!3.34e-11!34;UBERON:0001869!5.09e-11!32;UBERON:0004121!8.58e-11!169;UBERON:0000924!1.12e-10!173;UBERON:0006601!1.12e-10!173;UBERON:0002791!1.31e-10!33;UBERON:0002020!3.01e-10!34;UBERON:0003528!3.01e-10!34;UBERON:0002780!3.53e-10!41;UBERON:0001890!3.53e-10!41;UBERON:0006240!3.53e-10!41;UBERON:0003080!8.99e-10!42;UBERON:0000956!4.36e-09!25;UBERON:0000203!4.36e-09!25;UBERON:0000475!7.03e-09!365;UBERON:0000481!2.21e-07!347;UBERON:0002619!8.97e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.69e-17;11!UBERON:0001778;1.74e-16;3!UBERON:0002114;1.74e-16;2!UBERON:0001775;1.74e-16;3!UBERON:0001801;8.24e-14;14!UBERON:0010077;4.77e-13;4!UBERON:0005389;4.77e-13;4!UBERON:0000484;4.77e-13;4!UBERON:0000965;4.77e-13;4!UBERON:0001803;4.77e-13;4!UBERON:0004913;5.37e-13;1!UBERON:0003703;5.37e-13;1!UBERON:0001174;5.37e-13;1!UBERON:0004914;5.37e-13;1!UBERON:0000488;1.31e-12;4!UBERON:0002108;2.84e-10;4!UBERON:0000019;3.07e-10;19!UBERON:0000047;3.07e-10;19!UBERON:0004088;3.07e-10;19!UBERON:0010230;3.07e-10;19!UBERON:0006876;4.03e-10;11!UBERON:0000970;9.75e-10;20!UBERON:0002104;2.77e-09;21!UBERON:0001456;2.77e-09;21!UBERON:0002203;1.04e-08;6!UBERON:0001768;1.04e-08;6!UBERON:0002200;1.04e-08;6!UBERON:0000020;1.71e-08;23!UBERON:0005409;2.09e-08;22!UBERON:0004921;3.64e-08;33!UBERON:0001032;3.81e-08;24!UBERON:0004456;3.81e-08;24!UBERON:0002294;9.88e-08;7!UBERON:0001173;9.88e-08;7!UBERON:0006562;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.06e-17,11;UBERON:0001778,7.30e-17,3;UBERON:0001775,7.30e-17,3;UBERON:0002114,2.20e-16,2;UBERON:0001801,5.72e-14,14;UBERON:0010077,4.78e-13,4;UBERON:0005389,4.78e-13,4;UBERON:0000484,4.78e-13,4;UBERON:0002546,4.78e-13,4;UBERON:0000965,4.78e-13,4;UBERON:0001803,4.78e-13,4;UBERON:0003073,4.78e-13,4;UBERON:0005426,4.78e-13,4;UBERON:0000488,6.84e-13,4;UBERON:0004913,9.73e-13,1;UBERON:0003703,9.73e-13,1;UBERON:0001174,9.73e-13,1;UBERON:0004914,9.73e-13,1;UBERON:0006876,2.94e-10,11;UBERON:0002108,3.27e-10,4;UBERON:0000019,7.58e-10,20;UBERON:0000047,7.58e-10,20;UBERON:0010312,7.58e-10,20;UBERON:0004088,7.58e-10,20;UBERON:0010230,7.58e-10,20;UBERON:0003072,7.58e-10,20;UBERON:0004128,7.58e-10,20;UBERON:0003071,7.58e-10,20;UBERON:0000970,2.19e-09,21;UBERON:0002104,2.19e-09,21;UBERON:0001456,5.72e-09,22;UBERON:0002203,6.77e-09,6;UBERON:0001768,6.77e-09,6;UBERON:0002200,6.77e-09,6;UBERON:0000020,3.09e-08,24;UBERON:0001032,3.09e-08,24;UBERON:0004456,3.09e-08,24;UBERON:0005409,1.92e-07,25;UBERON:0000076,5.88e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.816002764977012,0.313454721478088,0.572471974262113,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661743720148475,1.99556457716308,1.84453049955565,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.573673241497627,0,0,1.06748995729705,0.98667019366864,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0.329250856225877,0,0,0.0925884451585296,0,0,4.3299402607582,0.579652024875384,6.69229557144183,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,1.6798212819886,0,0.358234090811393,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.710783897485092,0,0.602878754119172,0,0.499864955910285,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0,1.37060810223918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0,0,0.364182336013434,0,0,0,0,0,0,0,0,0.647747748306418,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.31481234683064,0.6970372701606,0.924100740528266,0.532306030317022,0.869932992075073,0,0.858749320451947,1.116475108079,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.491245205065606,1.07001315444375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0,0,0,0,0.422008249231538,0,0,0.422250816255987,0.19924798825107,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0.371072392647405,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.649165919226273,0,0,0,0,0,0,0.337005664903385,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.34945333648406,0.171986032471617,0,0,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0.274083849293502,0,0.189932387867636,0,9.29842314917791,0.213452994739353,0,0,2.29073192331831,0.171594997861965,0,0,0,0.271808412147228,0.627617077873999,0.815985741090574,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.303747783290123,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0.170388021785422,0.453248366080503,0,0,0.646414781807753,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.625954653532499,0,0.332787154610557,0.18628920882415,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0,0,0,0.690860683462397,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0.639471856518258,0,0,0,0,0.212574920101683,0,0,0,0,0,0,1.2249819094128,0.0642292250964595,0,0.798169295285756,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0.231051332300676,1.1441462864015,0,0.198916222116275,0,0.20170506870352,0,0,0.655087670040387,1.03499260351932,0.202612753855184,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,1.02209942111676,0,0,0,0,0.0887023701626388,0,0.514464028312255,0.271878931907327,0.0657727735628491,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0.315543124386369,0.135982980381829,1.30905207102113,0,0,0,0,0,0,0.506794004045748,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@TGFB2 | |||
}} |
Latest revision as of 04:30, 25 September 2015
Short description: | p21@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_TGFB2_5end |
Coexpression cluster: | C2566_Lens_gall_papillotubular_anaplastic_Ciliary_osteoclastoma_alveolar |
Association with transcript: | 182bp_to_NM_001135599, NM_003238_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 7.30e-17 | 3 |
ciliated epithelial cell | 7.30e-17 | 3 |
multi-ciliated epithelial cell | 7.30e-17 | 3 |
non-pigmented ciliary epithelial cell | 7.30e-17 | 3 |
crystallin accumulating cell | 4.78e-13 | 4 |
vertebrate lens cell | 4.78e-13 | 4 |
lens epithelial cell | 4.78e-13 | 4 |
epithelial cell of gall bladder | 2.15e-07 | 2 |
columnar/cuboidal epithelial cell | 2.44e-07 | 27 |
central nervous system pericyte | 3.28e-07 | 2 |
bone matrix secreting cell | 3.93e-07 | 2 |
osteocyte | 3.93e-07 | 2 |
osteoclast | 3.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 3.93e-07 | 2 |
bone giant cell tumor | 3.93e-07 | 2 |
tubular adenocarcinoma | 5.28e-07 | 2 |