FFCP PHASE1:Hg19::chr1:21585318..21585329,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:21585318..21585329,- | |||
|description=CAGE_peak_at_chr1:21585318..21585329,- | |||
|id=chr1:21585318..21585329,- | |||
|ontology_enrichment_celltype=CL:0002139!8.25e-11!24;CL:0000071!4.66e-09!18;CL:0002546!4.66e-09!18;CL:0000222!5.69e-09!119;CL:0000115!8.49e-09!35;CL:0002078!1.31e-07!44;CL:0002371!1.32e-07!591;CL:0000860!2.70e-07!45;CL:0002057!3.92e-07!42;CL:0000192!4.00e-07!42;CL:0000514!4.00e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.03e-14;32!CL:0000115;1.05e-11;36!CL:0002188;2.06e-11;5!CL:0000071;7.72e-11;18!CL:0002139;3.47e-09;24!CL:1000413;6.75e-09;9!CL:0002078;1.86e-08;45!CL:0000192;4.74e-08;43!CL:1000746;5.00e-08;7!CL:1000612;5.00e-08;7!CL:0000860;5.39e-08;33!CL:0002057;5.39e-08;33!CL:0002595;9.05e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.00e-14,32;CL:0000222,1.29e-14,121;CL:0000115,2.82e-12,36;CL:0002078,8.00e-12,45;CL:0002188,2.11e-11,5;CL:0000192,2.94e-11,43;CL:0000514,2.94e-11,43;CL:0000071,7.83e-11,18;CL:0002546,7.83e-11,18;CL:0002139,2.86e-09,24;CL:0000187,5.92e-09,55;CL:1000413,7.31e-09,9;CL:0000680,2.91e-08,58;CL:0000056,2.91e-08,58;CL:0000355,2.91e-08,58;CL:1000746,5.07e-08,7;CL:1000612,5.07e-08,7;CL:0002595,6.18e-08,5;CL:0000393,1.21e-07,61;CL:0000211,1.21e-07,61;CL:0002321,3.82e-07,250;CL:0000213,4.53e-07,58;CL:0000215,4.53e-07,58;CL:0000860,6.10e-07,42;CL:0002057,6.10e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002546;7.72e-11;18!CL:0000514;4.74e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.43e-07;3!DOID:127;2.43e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.28e-07,3;DOID:127,1.28e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.17e-15!69;UBERON:0001981!3.22e-14!60;UBERON:0007500!3.22e-14!60;UBERON:0004537!3.22e-14!60;UBERON:0006965!3.22e-14!60;UBERON:0002049!5.31e-14!79;UBERON:0007798!5.31e-14!79;UBERON:0001637!2.32e-12!42;UBERON:0003509!2.32e-12!42;UBERON:0004572!2.32e-12!42;UBERON:0004872!3.44e-12!84;UBERON:0004535!3.43e-11!110;UBERON:0001009!8.31e-11!113;UBERON:0003914!1.22e-09!118;UBERON:0003081!1.66e-09!216;UBERON:0001986!4.66e-09!18;UBERON:0004638!4.66e-09!18;UBERON:0004852!4.66e-09!18;UBERON:0000926!4.78e-09!448;UBERON:0004120!4.78e-09!448;UBERON:0006603!4.78e-09!448;UBERON:0004573!2.26e-08!33;UBERON:0004571!2.26e-08!33;UBERON:0000467!1.39e-07!625;UBERON:0000490!1.62e-07!138;UBERON:0000480!1.96e-07!626;UBERON:0000468!6.38e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.54e-19;42!UBERON:0003509;1.54e-19;42!UBERON:0004572;1.54e-19;42!UBERON:0004573;1.63e-15;33!UBERON:0004571;1.63e-15;33!UBERON:0007500;1.13e-14;56!UBERON:0001981;1.13e-14;56!UBERON:0004537;1.13e-14;56!UBERON:0003914;7.31e-12;74!UBERON:0004638;7.72e-11;18!UBERON:0001986;7.72e-11;18!UBERON:0004852;7.72e-11;18!UBERON:0000055;2.91e-10;65!UBERON:0000947;2.60e-09;21!UBERON:0010191;2.60e-09;21!UBERON:0003915;6.75e-09;9!UBERON:0004700;6.75e-09;9!UBERON:0001917;6.75e-09;9!UBERON:0006914;1.01e-08;25!UBERON:0000487;1.79e-08;22!UBERON:0002049;3.04e-08;75!UBERON:0007798;3.04e-08;75!UBERON:0000490;3.40e-08;33!UBERON:0000074;5.00e-08;7!UBERON:0001229;5.00e-08;7!UBERON:0003834;9.05e-08;5!UBERON:0001533;9.05e-08;5!UBERON:0000025;2.07e-07;93 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.50e-25,42;UBERON:0003509,2.50e-25,42;UBERON:0004572,2.50e-25,42;UBERON:0007500,6.61e-23,59;UBERON:0001981,6.61e-23,59;UBERON:0004537,6.61e-23,59;UBERON:0006965,6.61e-23,59;UBERON:0000055,1.86e-20,68;UBERON:0004872,4.58e-18,83;UBERON:0003914,9.86e-18,117;UBERON:0002049,8.82e-17,78;UBERON:0007798,8.82e-17,78;UBERON:0004573,5.94e-16,33;UBERON:0004571,5.94e-16,33;UBERON:0003081,2.00e-14,203;UBERON:0004535,8.84e-13,109;UBERON:0001009,3.27e-12,112;UBERON:0000926,4.79e-11,315;UBERON:0004120,4.79e-11,315;UBERON:0006603,4.79e-11,315;UBERON:0004638,7.83e-11,18;UBERON:0001986,7.83e-11,18;UBERON:0004852,7.83e-11,18;UBERON:0007503,1.61e-10,78;UBERON:0000490,2.69e-09,148;UBERON:0000947,5.04e-09,21;UBERON:0010191,5.04e-09,21;UBERON:0003915,7.31e-09,9;UBERON:0004700,7.31e-09,9;UBERON:0001917,7.31e-09,9;UBERON:0006914,1.04e-08,25;UBERON:0000487,1.81e-08,22;UBERON:0000025,3.81e-08,192;UBERON:0010532,5.07e-08,7;UBERON:0000074,5.07e-08,7;UBERON:0001229,5.07e-08,7;UBERON:0001230,5.07e-08,7;UBERON:0003220,5.07e-08,7;UBERON:0005749,5.07e-08,7;UBERON:0004199,5.07e-08,7;UBERON:0004209,5.07e-08,7;UBERON:0004198,5.07e-08,7;UBERON:0003834,6.18e-08,5;UBERON:0001533,6.18e-08,5;UBERON:0001134,1.88e-07,62;UBERON:0002036,1.88e-07,62;UBERON:0003082,1.88e-07,62;UBERON:0002385,4.35e-07,64;UBERON:0001015,4.35e-07,64;UBERON:0000383,4.35e-07,64;UBERON:0005103,5.79e-07,8;UBERON:0000083,5.79e-07,8;UBERON:0009201,5.79e-07,8;UBERON:0006553,5.79e-07,8;UBERON:0003074,5.79e-07,8;UBERON:0003060,5.79e-07,8;UBERON:0002329,6.97e-07,71;UBERON:0003059,6.97e-07,71;UBERON:0007282,6.97e-07,71;UBERON:0004290,6.97e-07,71;UBERON:0009618,6.97e-07,71;UBERON:0000486,9.41e-07,83;UBERON:0003077,1.00e-06,72;UBERON:0007285,1.00e-06,72 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,1.74467704820074,0,0,0.522371256399677,0,2.09340350391728,0.218441372130172,0.791300934685361,0.495065411840187,0.994192127183747,3.36162573225888,3.01347264011988,2.19093027116212,2.43966399395253,0.123121058076788,0.816002764977012,0.313454721478088,0,0.273748850145768,0.627713197974014,0.0764134057479513,0,0.0787107813136792,0,0,0,0.919421224478927,1.50602959389125,1.10926203050036,0,0,0,0.553995408531877,1.20326668482085,0.217010870715852,0,0,0,1.01778767145695,1.13362783106643,0.727752183563449,1.85943229524548,2.46700732813095,0.929119112685311,0.28769239232215,0.768482119587302,0.236482229888585,0.689491361473237,0,1.35426486594342,1.12945403725563,1.09162460023138,1.12361742222542,2.14258724659632,0.641858054152187,0,0.659702600373432,0.797854630486527,0.426224750532694,2.90209238628584,0,2.4912889959823,0.251248665256743,0,0.434377689410233,4.23779651843358,1.10483290796269,0.949387162322653,0.211255286311942,0.212604299965044,0.209658645508376,0.44931452458598,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0,0,0,0,0,0,0,0,0.393010762749165,0,0.167186495390678,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0.640456598628376,0.260118695119756,0.493313713811028,0.276350017785848,0,0.296573126324121,0.535081656179426,0,0.226618685395132,0.383220493601921,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.351339142772504,0.130979075497713,0.364295288292542,0.741568885568859,0,0.348259474598534,0.132957960518865,0,0,0,1.19257444420023,0,0.347140501607594,0.56530794192401,1.67799774483962,2.75118041940067,3.76190939766259,0.516833518338658,0.35576626268671,0.33472061276467,1.61131726843659,0.760272105718513,0.976248230192678,1.10298924103761,5.67099363517232,1.16089646769304,0.898117490504679,0.563057402416611,1.53316637465883,0.949265659568129,3.11442964681692,0,0,0,0.993943903390637,1.01304409331664,0.397227542439656,2.0078563452417,0.709336764396714,0.560677600142307,0,0.49333509683432,0.311211035399766,2.82892411346345,1.9615428373615,0.151357427644931,0,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0.704606991862589,0.647491777472526,0.140450806702248,0,0.491337269247072,0.516628905878827,0,1.23633464639278,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0.751190294532984,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.412210116953756,0.515281080091258,0.558350568994769,0,0.68205903612839,0.504867548488229,0.184099797284599,0.484938170456436,1.06502877754984,0,0.169560592310488,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,2.57296375277154,0,0.464367928031979,2.16563844500876,0.709840800239063,0,0,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,1.26755034821831,0,0,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,1.44331342025273,0.115930404975077,0,0.577465791044295,1.85194205030644,0.951270761172991,0,0.858486162094873,0,0,0,0,0.335964256397719,0.708875486211932,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.224262168690721,0,0,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.428933980974443,0.542621605391443,0.823240336780769,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.410952645100767,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,2.99602809578873,5.9832291840805,0.414415513436035,0.36807447515742,0.500170521059677,0,0.623912584592421,0.178428988797162,0.315404830067869,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0.391602314925481,1.71571711905428,0,0.215714200818617,0.213455115606889,0.303127571446259,0,0.604780586659361,0,0,0.841980283299221,0.128139149255701,0,0.160853921143607,1.48418066444991,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.581051892299796,0,0.40101294060657,0.276242966807689,0.34444334449382,1.0925470080403,0.524497659837696,0,0.539107359730903,0,1.46139224653261,0.211103257785751,3.4120015221269,1.02056223165909,1.94324324491925,1.54227252690289,0.270946437543853,0,0,0,0.223874754722178,0.219259876645935,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0.462145851343933,0.307007349452259,0,0.107420244868274,0.290033387828457,0.255679882248303,0,0.165284915360978,1.34533047155574,0,0.708104465988849,0,1.5740617341532,0,0.616067160352178,0.532306030317022,0,0.55597265731176,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,2.35484592059769,0.359744915166629,0.274537029736055,0.353437207037059,0.606547444719948,1.58510321173008,1.26377536871694,0,1.94970791705028,12.6780176108107,0.682499557039929,1.27264888758341,3.39024349860728,0,1.32687795048244,2.19225442626881,0,0.655894752046633,0.608731130888112,1.239293992399,1.971869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| |||
|short_description=p@chr1:21585318..21585329,- | |||
}} |
Latest revision as of 03:49, 28 July 2015
Short description: | p@chr1:21585318..21585329, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:21585318..21585329, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.00e-14 | 32 |
mesodermal cell | 1.29e-14 | 121 |
endothelial cell | 2.82e-12 | 36 |
meso-epithelial cell | 8.00e-12 | 45 |
glomerular endothelial cell | 2.11e-11 | 5 |
smooth muscle cell | 2.94e-11 | 43 |
smooth muscle myoblast | 2.94e-11 | 43 |
blood vessel endothelial cell | 7.83e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.83e-11 | 18 |
endothelial cell of vascular tree | 2.86e-09 | 24 |
muscle cell | 5.92e-09 | 55 |
endothelial cell of artery | 7.31e-09 | 9 |
muscle precursor cell | 2.91e-08 | 58 |
myoblast | 2.91e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.91e-08 | 58 |
glomerular cell | 5.07e-08 | 7 |
kidney corpuscule cell | 5.07e-08 | 7 |
smooth muscle cell of the subclavian artery | 6.18e-08 | 5 |
electrically responsive cell | 1.21e-07 | 61 |
electrically active cell | 1.21e-07 | 61 |
embryonic cell | 3.82e-07 | 250 |
lining cell | 4.53e-07 | 58 |
barrier cell | 4.53e-07 | 58 |
classical monocyte | 6.10e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.28e-07 | 3 |
leiomyoma | 1.28e-07 | 3 |