FFCP PHASE1:Hg19::chr1:204121034..204121055,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25575 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NVF9 | |||
|association_with_transcript=-12bp_to_ENST00000367201_5end | |||
|cluster_id=chr1:204121034..204121055,- | |||
|description=CAGE_peak_7_at_ETNK2_5end | |||
|id=chr1:204121034..204121055,- | |||
|ontology_enrichment_celltype=CL:0000066!3.61e-19!254;CL:0000220!1.38e-14!246;CL:0002321!1.80e-14!248;CL:0000076!3.75e-07!62;CL:0002078!8.13e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002681;5.19e-10;12!CL:0002584;5.19e-10;12!CL:1000449;7.94e-09;15!CL:1000497;2.10e-07;17!CL:0002518;2.10e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.39e-13,253;CL:0002681,5.88e-10,12;CL:0002584,5.88e-10,12;CL:0002321,6.83e-10,250;CL:1000449,7.48e-09,15;CL:1000497,1.99e-07,17;CL:0002518,1.99e-07,17;CL:0002078,9.24e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.20e-11!659;UBERON:0000475!3.31e-11!365;UBERON:0000119!1.59e-10!312;UBERON:0000483!7.93e-10!309;UBERON:0000466!9.46e-10!126;UBERON:0000467!1.19e-09!625;UBERON:0005177!1.22e-09!107;UBERON:0000464!1.64e-09!104;UBERON:0000480!1.85e-09!626;UBERON:0000481!2.90e-09!347;UBERON:0000064!2.94e-09!219;UBERON:0000062!3.81e-09!511;UBERON:0004119!4.32e-09!169;UBERON:0000925!4.32e-09!169;UBERON:0006595!4.32e-09!169;UBERON:0001008!4.62e-09!45;UBERON:0003064!6.27e-09!37;UBERON:0006554!1.03e-08!44;UBERON:0000922!2.08e-08!612;UBERON:0002050!4.87e-08!605;UBERON:0005423!4.87e-08!605;UBERON:0003886!6.65e-08!63;UBERON:0002100!7.60e-08!216;UBERON:0002553!8.06e-08!70;UBERON:0000923!9.78e-08!604;UBERON:0005291!9.78e-08!604;UBERON:0006598!9.78e-08!604;UBERON:0002532!9.78e-08!604;UBERON:0001851!2.93e-07!16;UBERON:0000080!5.83e-07!18;UBERON:0002120!5.83e-07!18;UBERON:0004875!5.83e-07!18;UBERON:0005721!5.83e-07!18;UBERON:0005754!5.83e-07!18;UBERON:0007297!5.83e-07!18;UBERON:0005156!6.34e-07!59;UBERON:0000990!6.34e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001851;9.94e-11;15!UBERON:0001225;5.19e-10;12!UBERON:0008987;5.19e-10;12!UBERON:0006555;7.94e-09;15!UBERON:0004819;7.94e-09;15!UBERON:0001285;7.94e-09;15!UBERON:0007684;7.94e-09;15!UBERON:0006554;8.79e-09;30!UBERON:0001008;8.79e-09;30!UBERON:0000353;2.08e-07;15!UBERON:0002113;4.16e-07;24!UBERON:0011143;4.16e-07;24!UBERON:0000305;5.34e-07;7!UBERON:0000489;5.87e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,5.43e-11,48;UBERON:0001851,9.76e-11,15;UBERON:0006554,1.91e-10,47;UBERON:0001225,5.88e-10,12;UBERON:0008987,5.88e-10,12;UBERON:0004211,7.48e-09,15;UBERON:0009773,7.48e-09,15;UBERON:0001231,7.48e-09,15;UBERON:0001285,7.48e-09,15;UBERON:0007684,7.48e-09,15;UBERON:0004208,7.48e-09,15;UBERON:0006555,4.29e-08,16;UBERON:0004819,4.29e-08,16;UBERON:0005177,9.72e-08,101;UBERON:0000353,2.27e-07,15;UBERON:0000305,4.46e-07,7;UBERON:0005631,5.86e-07,14;UBERON:0000158,5.86e-07,14;UBERON:0002113,6.07e-07,26;UBERON:0003918,6.07e-07,26;UBERON:0011143,6.07e-07,26;UBERON:0005095,6.07e-07,26;UBERON:0007687,6.07e-07,26 | |||
|phase1_expression=0.54503513781167,0,1.26858963686374,0,0.893922188854576,0,0,0,0,0.245733936501509,4.18680700783456,3.71350332621293,5.01157258634062,0.74259811776028,0.331397375727916,1.34465029290355,1.20538905604795,0.730310090387373,0,1.23121058076788,2.65200898617529,2.5076377718247,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0.309632246632152,1.83884244895785,1.8072355126695,0.739508020333575,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.535081656179426,0,0,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0.670700859703636,0.639312809217652,0,0,0,0,0.486634870302636,0.756278537312543,1.33037638477538,0.527008714158756,1.37528029272598,1.82147644146271,1.85392221392215,0,0,0.26591592103773,0,0,0,1.98762407366705,0,1.73570250803797,0.56530794192401,4.19499436209906,2.20094433552054,0.417989933073621,0.775250277507987,0,1.00416183829401,2.81980521976403,2.28081631715554,6.83373761134875,0.735326160691737,3.24056779152704,0.892997282840798,0.44905874525234,0.225222960966644,0,2.84779697870439,0.732806975721629,0,0,1.3082821564276,0,0.633152558322899,0,0.286836620748814,1.06400514659507,0.560677600142307,1.06748995729705,2.22000793575444,0.311211035399766,0.808264032418128,0.326923806226917,1.05950199351452,0,0.70296429550139,0,0.570471821544449,0.149448680551801,0.23486899728753,0.323745888736263,0.140450806702248,0.204154171254893,0.737005903870608,0.723280468230358,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.750711119231785,0.831192346452549,0,0,0.150238058906597,0.567160915800105,0,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,1.11670113798954,0.337552664482532,0.487185025805993,0.504867548488229,0.184099797284599,1.2931684545505,0,0.302256294682921,0.67824236924195,0.773043412653187,0.818238361772504,0.860413786167011,0,0.795178609928912,0.580969714347592,0.725627385107593,0.756962552626885,0,0,1.28648187638577,2.76269842704961,0,0,0,0,0,0.110293972732394,0,0,0,0.392442930250692,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,0.686271241194102,1.20725313949488,1.1240175325762,0.402115889646523,1.29623823221941,1.62904152655162,3.11980435583874,0,0.811512834825538,0.821860859650752,2.59859605969933,0.925971025153221,1.71228737011138,0,0.858486162094873,0,0.234004265139238,0.445893486866185,0,0.671928512795438,0.283550194484773,0.626909658919938,0.581267877027924,0,1.47798971368783,0,0.207328115540772,0.432359860250884,0.25248486685276,0.761974731506028,1.14596527667483,0,1.71072446022705,1.54241239054985,0.300343057843917,1.71495859578347,1.45770409648969,1.74384027533312,0.8800594298514,0.517086863031111,3.57656445851882,0,2.12750493267896,0,0.514414748524284,0,0,0.714889968290738,1.62786481617433,0,0,0.710783897485092,0,0.301439377059586,0,0.99972991182057,1.2162378064119,0.502257091432126,2.10833939483032,0.479249710983165,1.14861935834114,0,0,0,0,0,0.197030760201927,0.646882724578552,0.513372145118994,1.01637849688985,0,0,0.502548796003046,0.637938751653163,0,0,0,1.8403723757871,1.50051156317903,0.271265023699736,1.03985430765404,0.713715955188647,0.788512075169673,1.7571212248907,3.00946099727719,0,1.03473071292505,0,0.737476674166813,0.434418072340414,2.74121620447837,2.74514739048685,0,0,0.106727557803444,4.54691357169389,8.32177197552485,8.46692821323105,0,0,0.280660094433074,0.256278298511402,0.511707249066704,0.160853921143607,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0.116210378459959,0.362578348774867,1.60405176242628,1.74953878978203,0.229628896329213,0.910455840033585,1.44236856455367,1.35359883872224,1.30926073077505,0.784349769176855,1.46139224653261,0.316654886678627,3.4120015221269,1.70093705276516,0.215915916102139,6.16909010761157,1.35473218771926,1.50506932156456,1.01950509218015,2.49322802678617,1.34324852833307,0,0,0.512900250232778,0.984043937099117,0,0.721287081534056,1.37354197227515,0.907604499126468,1.14853107599234,1.30012049207304,0,0.676695028044854,0.616194468458578,0.460511024178389,0.275673144969061,0.322260734604821,0.435050081742686,0.596586391912706,1.33548053470106,1.32227932288782,1.53752053892085,0.255225424989168,2.12431339796655,0.929691098594572,0,0.6970372701606,0.616067160352178,1.06461206063404,0,0.18532421910392,0.143124886741991,1.48863347743867,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,1.59101623962968,0,0.179872457583315,0.823611089208164,0.471249609382746,0.808729926293264,0,1.26377536871694,1.46290121726877,0,0,1.36499911407986,0.565621727814851,1.13008116620243,0,0,0,1.15755106853338,1.9676842561399,0,0.30982349809975,0,0,1.17898849215745,0,1.41904425628239,0,0.329294892959902,0.7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| |||
|short_description=p7@ETNK2 | |||
}} |
Latest revision as of 00:25, 20 September 2015
Short description: | p7@ETNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ETNK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000367201_5end |
EntrezGene: | ETNK2 |
HGNC: | 25575 |
UniProt: | Q9NVF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.39e-13 | 253 |
kidney cortical cell | 5.88e-10 | 12 |
renal cortical epithelial cell | 5.88e-10 | 12 |
embryonic cell | 6.83e-10 | 250 |
epithelial cell of nephron | 7.48e-09 | 15 |
kidney cell | 1.99e-07 | 17 |
kidney epithelial cell | 1.99e-07 | 17 |
meso-epithelial cell | 9.24e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
renal system | 5.43e-11 | 48 |
cortex | 9.76e-11 | 15 |
urinary system structure | 1.91e-10 | 47 |
cortex of kidney | 5.88e-10 | 12 |
renal parenchyma | 5.88e-10 | 12 |
nephron epithelium | 7.48e-09 | 15 |
renal tubule | 7.48e-09 | 15 |
nephron tubule | 7.48e-09 | 15 |
nephron | 7.48e-09 | 15 |
uriniferous tubule | 7.48e-09 | 15 |
nephrogenic mesenchyme | 7.48e-09 | 15 |
excretory tube | 4.29e-08 | 16 |
kidney epithelium | 4.29e-08 | 16 |
trunk region element | 9.72e-08 | 101 |
parenchyma | 2.27e-07 | 15 |
amnion | 4.46e-07 | 7 |
extraembryonic membrane | 5.86e-07 | 14 |
membranous layer | 5.86e-07 | 14 |
kidney | 6.07e-07 | 26 |
kidney mesenchyme | 6.07e-07 | 26 |
upper urinary tract | 6.07e-07 | 26 |
kidney rudiment | 6.07e-07 | 26 |
kidney field | 6.07e-07 | 26 |