FFCP PHASE1:Hg19::chr1:174417095..174417131,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4508 | |||
|TSSclassifier=strong | |||
|UniProt=F2YGU0,Q9Y2T5 | |||
|association_with_transcript=-80bp_to_ENST00000367685,NM_005684,uc001gka.1_5end | |||
|cluster_id=chr1:174417095..174417131,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_GPR52_5end | |||
|id=chr1:174417095..174417131,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.01e-34;2!UBERON:0006222;5.72e-18;1!UBERON:0006601;1.16e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.35e-87!41;UBERON:0001890!2.35e-87!41;UBERON:0006240!2.35e-87!41;UBERON:0003080!3.59e-85!42;UBERON:0001893!2.25e-84!34;UBERON:0001869!3.66e-83!32;UBERON:0002791!3.48e-80!33;UBERON:0002020!1.09e-71!34;UBERON:0003528!1.09e-71!34;UBERON:0001049!1.98e-61!57;UBERON:0005068!1.98e-61!57;UBERON:0006241!1.98e-61!57;UBERON:0007135!1.98e-61!57;UBERON:0002619!1.28e-60!22;UBERON:0001950!1.60e-59!20;UBERON:0002616!3.68e-59!59;UBERON:0003056!4.88e-57!61;UBERON:0000955!1.22e-56!69;UBERON:0006238!1.22e-56!69;UBERON:0001017!1.62e-53!82;UBERON:0000956!3.89e-53!25;UBERON:0000203!3.89e-53!25;UBERON:0005743!9.36e-51!86;UBERON:0000073!2.26e-45!94;UBERON:0001016!2.26e-45!94;UBERON:0003075!9.51e-45!86;UBERON:0007284!9.51e-45!86;UBERON:0002346!1.79e-42!90;UBERON:0007023!9.61e-37!115;UBERON:0002420!4.63e-34!9;UBERON:0007245!4.63e-34!9;UBERON:0010009!4.63e-34!9;UBERON:0010011!4.63e-34!9;UBERON:0000454!4.63e-34!9;UBERON:0000153!1.31e-31!129;UBERON:0007811!1.31e-31!129;UBERON:0000033!2.74e-31!123;UBERON:0001871!1.67e-27!7;UBERON:0009663!3.00e-25!7;UBERON:0002021!6.27e-23!5;UBERON:0004121!2.07e-22!169;UBERON:0000924!9.82e-22!173;UBERON:0006601!9.82e-22!173;UBERON:0000369!2.19e-20!4;UBERON:0002435!2.19e-20!4;UBERON:0000204!2.19e-20!4;UBERON:0010082!2.19e-20!4;UBERON:0002308!1.70e-19!9;UBERON:0000125!1.70e-19!9;UBERON:0000200!7.03e-19!6;UBERON:0005383!1.03e-15!3;UBERON:0005382!1.03e-15!3;UBERON:0000349!1.42e-15!5;UBERON:0000025!8.44e-15!194;UBERON:0002771!3.84e-14!3;UBERON:0001873!4.79e-11!2;UBERON:0010122!4.79e-11!2;UBERON:0001875!6.10e-11!2;UBERON:0006514!6.10e-11!2;UBERON:0001876!1.14e-10!2;UBERON:0004111!1.26e-10!241;UBERON:0002360!5.84e-10!2;UBERON:0000094!5.84e-10!2;UBERON:0007645!5.84e-10!2;UBERON:0000477!1.60e-09!286;UBERON:0000483!4.12e-09!309;UBERON:0000119!5.89e-09!312;UBERON:0001872!7.87e-09!5;UBERON:0000064!2.17e-08!219;UBERON:0000475!2.63e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002420;1.69e-89;9!UBERON:0007245;1.69e-89;9!UBERON:0010009;1.69e-89;9!UBERON:0010011;1.69e-89;9!UBERON:0000454;1.69e-89;9!UBERON:0009663;4.08e-85;7!UBERON:0000369;4.48e-67;4!UBERON:0002435;4.48e-67;4!UBERON:0000204;4.48e-67;4!UBERON:0000125;3.04e-66;9!UBERON:0002308;3.04e-66;9!UBERON:0005383;1.05e-50;3!UBERON:0005382;1.05e-50;3!UBERON:0002791;2.26e-38;32!UBERON:0002780;1.30e-37;41!UBERON:0001890;1.30e-37;41!UBERON:0001869;1.22e-36;32!UBERON:0001873;2.01e-34;2!UBERON:0001875;5.52e-34;2!UBERON:0006514;5.52e-34;2!UBERON:0001893;1.60e-33;34!UBERON:0003528;2.00e-32;34!UBERON:0002020;2.00e-32;34!UBERON:0000955;3.26e-23;68!UBERON:0000073;6.78e-23;53!UBERON:0002616;6.78e-23;53!UBERON:0001017;1.02e-18;75!UBERON:0001882;3.16e-18;1!UBERON:0005403;3.16e-18;1!UBERON:0001874;3.75e-18;1!UBERON:0002022;9.49e-18;1!UBERON:0001016;3.49e-16;83!UBERON:0000349;3.15e-14;5!UBERON:0001894;1.90e-10;7!UBERON:0001897;1.33e-09;2!UBERON:0010225;1.33e-09;2!UBERON:0001876;1.86e-09;2!UBERON:0001950;1.33e-07;20!UBERON:0007023;2.42e-07;114!UBERON:0002619;5.48e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002420,1.70e-89,9;UBERON:0007245,1.70e-89,9;UBERON:0010009,1.70e-89,9;UBERON:0010011,1.70e-89,9;UBERON:0000454,1.70e-89,9;UBERON:0009663,4.08e-85,7;UBERON:0000369,4.87e-67,4;UBERON:0002435,4.87e-67,4;UBERON:0000204,4.87e-67,4;UBERON:0010082,4.87e-67,4;UBERON:0000125,3.04e-66,9;UBERON:0002308,3.04e-66,9;UBERON:0005383,1.14e-50,3;UBERON:0005382,1.14e-50,3;UBERON:0002780,1.21e-46,41;UBERON:0001890,1.21e-46,41;UBERON:0003080,1.21e-46,41;UBERON:0006240,1.21e-46,41;UBERON:0002791,8.47e-40,32;UBERON:0001869,8.47e-40,32;UBERON:0003528,1.69e-37,34;UBERON:0002020,1.69e-37,34;UBERON:0001893,1.69e-37,34;UBERON:0000073,3.79e-36,53;UBERON:0002616,3.79e-36,53;UBERON:0001873,2.18e-34,2;UBERON:0010122,2.18e-34,2;UBERON:0001049,3.27e-34,56;UBERON:0005068,3.27e-34,56;UBERON:0006241,3.27e-34,56;UBERON:0007135,3.27e-34,56;UBERON:0001875,5.07e-34,2;UBERON:0006514,5.07e-34,2;UBERON:0000955,4.57e-33,68;UBERON:0006238,4.57e-33,68;UBERON:0003056,2.12e-31,61;UBERON:0001017,8.85e-28,81;UBERON:0001016,5.43e-25,89;UBERON:0003075,2.80e-23,82;UBERON:0007284,2.80e-23,82;UBERON:0002346,3.56e-22,86;UBERON:0010371,3.05e-18,104;UBERON:0001882,3.16e-18,1;UBERON:0005403,3.16e-18,1;UBERON:0001874,3.75e-18,1;UBERON:0002022,1.03e-17,1;UBERON:0007023,9.73e-17,114;UBERON:0000349,3.15e-14,5;UBERON:0010314,3.16e-14,132;UBERON:0004121,8.03e-13,171;UBERON:0000924,8.03e-13,171;UBERON:0006601,8.03e-13,171;UBERON:0001894,1.85e-10,7;UBERON:0006222,1.85e-10,7;UBERON:0011216,1.33e-09,223;UBERON:0001897,1.33e-09,2;UBERON:0010225,1.33e-09,2;UBERON:0000025,1.62e-09,192;UBERON:0001876,1.86e-09,2;UBERON:0001950,1.37e-07,20;UBERON:0004111,2.03e-07,240;UBERON:0002619,5.65e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,1.99613798001194,0,0,0,0,0,0,0,0,0,38.9726209758089,16.6423085303063,0,0,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,16.8670400922244,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.8138695274231,3.55953985119182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,3.15897694621728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.4624407397413,1.41696576325585,0.159633859057151,0.205116364240755,0.756215088665154,0.414943514785307,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.328863867814245,0,0,0,22.9388761277363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543931921527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27508278895666,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GPR52 | |||
}} |
Latest revision as of 18:54, 18 September 2015
Short description: | p1@GPR52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR52_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -80bp_to_ENST00000367685, NM_005684, uc001gka.1_5end |
EntrezGene: | GPR52 |
HGNC: | 4508 |
UniProt: | F2YGU0Q9Y2T5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data