FFCP PHASE1:Hg19::chr1:153599732..153599803,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |||
|association_with_transcript=0bp_to_ENST00000392623,NM_001024212,uc001fcg.2,uc009woh.2_5end | |||
|cluster_id=chr1:153599732..153599803,- | |||
|description=CAGE_peak_4_at_S100A13_5end | |||
|id=chr1:153599732..153599803,- | |||
|ontology_enrichment_celltype=CL:0000055!1.37e-21!180;CL:0000220!1.40e-19!246;CL:0002321!9.41e-19!248;CL:0000066!2.93e-17!254;CL:0000222!1.61e-12!119;CL:0000183!1.38e-11!59;CL:0000548!1.72e-11!679;CL:0000004!1.72e-11!679;CL:0000255!1.72e-11!679;CL:0000359!7.13e-11!32;CL:0000680!7.42e-11!57;CL:0000056!7.42e-11!57;CL:0000355!7.42e-11!57;CL:0000192!9.02e-11!42;CL:0000514!9.02e-11!42;CL:0000012!1.03e-10!682;CL:0000057!2.50e-10!75;CL:1000497!8.43e-10!18;CL:0002518!8.43e-10!18;CL:0000187!9.80e-10!54;CL:1000449!1.43e-08!16;CL:1000507!7.05e-08!12;CL:1000494!7.05e-08!12;CL:0000393!1.83e-07!60;CL:0000211!1.83e-07!60;CL:0000144!2.40e-07!625;CL:0002371!7.37e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.79e-11;17!CL:0002518;5.79e-11;17!CL:0000359;2.37e-10;32!CL:1000449;1.33e-09;15!CL:1000507;7.20e-09;10!CL:1000494;7.20e-09;10!CL:0000192;9.75e-08;43!CL:0002681;1.63e-07;12!CL:0002584;1.63e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.84e-16,250;CL:0000066,1.90e-13,253;CL:0000359,5.48e-11,32;CL:1000497,8.95e-11,17;CL:0002518,8.95e-11,17;CL:0000192,1.45e-10,43;CL:0000514,1.45e-10,43;CL:0000680,3.33e-10,58;CL:0000056,3.33e-10,58;CL:0000355,3.33e-10,58;CL:0000222,3.90e-10,121;CL:1000449,2.01e-09,15;CL:0000057,3.06e-09,76;CL:0000187,4.77e-09,55;CL:1000507,7.82e-09,10;CL:1000494,7.82e-09,10;CL:0002681,2.35e-07,12;CL:0002584,2.35e-07,12;CL:0000393,7.54e-07,61;CL:0000211,7.54e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;9.75e-08;43 | |||
|ontology_enrichment_disease=DOID:120!5.80e-07!27;DOID:193!8.22e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:120;4.46e-07;27!DOID:193;8.10e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,7.64e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002100!1.37e-16!216;UBERON:0000486!1.96e-14!82;UBERON:0000475!3.86e-14!365;UBERON:0003104!1.67e-13!238;UBERON:0009142!1.67e-13!238;UBERON:0005256!2.77e-13!143;UBERON:0000914!2.88e-13!83;UBERON:0002329!2.88e-13!83;UBERON:0003077!2.88e-13!83;UBERON:0003059!2.88e-13!83;UBERON:0007282!2.88e-13!83;UBERON:0009618!2.88e-13!83;UBERON:0007285!2.88e-13!83;UBERON:0004290!3.31e-12!70;UBERON:0000468!6.87e-11!659;UBERON:0000467!8.91e-11!625;UBERON:0000480!9.39e-11!626;UBERON:0000481!4.41e-10!347;UBERON:0003102!5.75e-10!95;UBERON:0001134!2.99e-09!61;UBERON:0002036!2.99e-09!61;UBERON:0003082!2.99e-09!61;UBERON:0001637!3.02e-09!42;UBERON:0003509!3.02e-09!42;UBERON:0004572!3.02e-09!42;UBERON:0002385!6.33e-09!63;UBERON:0001015!6.33e-09!63;UBERON:0000383!6.33e-09!63;UBERON:0000464!8.99e-09!104;UBERON:0000119!9.05e-09!312;UBERON:0003914!1.01e-08!118;UBERON:0002199!1.19e-08!45;UBERON:0002416!1.19e-08!45;UBERON:0004211!1.43e-08!16;UBERON:0001285!1.43e-08!16;UBERON:0007684!1.43e-08!16;UBERON:0003220!1.43e-08!16;UBERON:0004208!1.43e-08!16;UBERON:0006555!2.27e-08!17;UBERON:0005103!2.27e-08!17;UBERON:0000083!2.27e-08!17;UBERON:0009201!2.27e-08!17;UBERON:0004819!2.27e-08!17;UBERON:0006553!2.27e-08!17;UBERON:0003074!2.27e-08!17;UBERON:0003060!2.27e-08!17;UBERON:0000483!2.39e-08!309;UBERON:0004872!3.27e-08!84;UBERON:0004876!3.63e-08!20;UBERON:0003100!4.02e-08!41;UBERON:0004573!4.54e-08!33;UBERON:0004571!4.54e-08!33;UBERON:0003103!4.94e-08!69;UBERON:0002049!5.86e-08!79;UBERON:0007798!5.86e-08!79;UBERON:0009773!7.05e-08!12;UBERON:0001231!7.05e-08!12;UBERON:0004810!7.05e-08!12;UBERON:0000080!9.52e-08!18;UBERON:0002120!9.52e-08!18;UBERON:0004875!9.52e-08!18;UBERON:0005721!9.52e-08!18;UBERON:0005754!9.52e-08!18;UBERON:0007297!9.52e-08!18;UBERON:0003134!9.55e-08!37;UBERON:0000474!9.55e-08!37;UBERON:0000926!1.18e-07!448;UBERON:0004120!1.18e-07!448;UBERON:0006603!1.18e-07!448;UBERON:0002097!1.20e-07!40;UBERON:0003886!2.21e-07!63;UBERON:0002113!2.81e-07!27;UBERON:0003918!2.81e-07!27;UBERON:0005095!2.81e-07!27;UBERON:0007687!2.81e-07!27;UBERON:0002553!2.92e-07!70;UBERON:0001981!3.22e-07!60;UBERON:0007500!3.22e-07!60;UBERON:0004537!3.22e-07!60;UBERON:0006965!3.22e-07!60;UBERON:0003133!3.97e-07!48;UBERON:0006554!4.66e-07!44;UBERON:0000055!5.50e-07!69;UBERON:0005156!7.49e-07!59;UBERON:0000990!7.49e-07!59;UBERON:0001008!7.60e-07!45;UBERON:0000064!9.50e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.33e-09;15!UBERON:0004819;1.33e-09;15!UBERON:0001285;1.33e-09;15!UBERON:0007684;1.33e-09;15!UBERON:0004211;7.20e-09;10!UBERON:0009773;7.20e-09;10!UBERON:0001231;7.20e-09;10!UBERON:0004810;7.20e-09;10!UBERON:0001225;1.63e-07;12!UBERON:0008987;1.63e-07;12!UBERON:0004573;1.66e-07;33!UBERON:0004571;1.66e-07;33!UBERON:0006554;2.47e-07;30!UBERON:0001008;2.47e-07;30!UBERON:0002113;3.21e-07;24!UBERON:0011143;3.21e-07;24!UBERON:0000353;6.72e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,5.70e-14,78;UBERON:0000486,8.05e-14,83;UBERON:0002100,1.26e-12,199;UBERON:0002329,9.61e-12,71;UBERON:0003059,9.61e-12,71;UBERON:0007282,9.61e-12,71;UBERON:0004290,9.61e-12,71;UBERON:0009618,9.61e-12,71;UBERON:0007524,2.28e-11,73;UBERON:0003077,2.88e-11,72;UBERON:0007285,2.88e-11,72;UBERON:0003102,4.29e-10,99;UBERON:0003104,7.74e-10,160;UBERON:0009142,7.74e-10,160;UBERON:0001637,1.77e-09,42;UBERON:0003509,1.77e-09,42;UBERON:0004572,1.77e-09,42;UBERON:0004211,2.01e-09,15;UBERON:0009773,2.01e-09,15;UBERON:0001231,2.01e-09,15;UBERON:0001285,2.01e-09,15;UBERON:0007684,2.01e-09,15;UBERON:0004208,2.01e-09,15;UBERON:0002199,2.63e-09,46;UBERON:0002416,2.63e-09,46;UBERON:0006555,3.59e-09,16;UBERON:0004819,3.59e-09,16;UBERON:0004810,7.82e-09,10;UBERON:0001134,1.14e-08,62;UBERON:0002036,1.14e-08,62;UBERON:0003082,1.14e-08,62;UBERON:0004573,1.62e-08,33;UBERON:0004571,1.62e-08,33;UBERON:0002385,3.08e-08,64;UBERON:0001015,3.08e-08,64;UBERON:0000383,3.08e-08,64;UBERON:0002097,3.26e-08,41;UBERON:0005256,1.31e-07,122;UBERON:0003100,1.83e-07,41;UBERON:0001225,2.35e-07,12;UBERON:0008987,2.35e-07,12;UBERON:0003134,3.02e-07,37;UBERON:0000474,3.02e-07,37;UBERON:0003914,3.07e-07,117;UBERON:0004923,3.13e-07,66;UBERON:0000490,4.14e-07,148;UBERON:0004872,5.36e-07,83;UBERON:0003103,8.38e-07,68;UBERON:0000995,9.88e-07,21 | |||
|phase1_expression=5.08699461957559,5.1384125733836,1.83240725324762,8.00586386825043,4.46961094427288,8.72338524100369,7.59899634504932,4.42203911398782,1.04474251279935,4.17747692052565,2.09340350391728,9.61142037372758,8.44054330331051,4.45558870656168,5.96515276310248,5.3786011716142,6.62963980826375,5.84248072309899,9.75865597581014,5.17108443922509,13.2600449308764,5.64218498660558,1.14494394852423,2.32686522623903,1.88313959392204,0,0,0,0,0,0.154816123316076,18.3884244895785,9.93979531968225,4.06729411183466,0.0774672005803016,0,0,0,0,0.217010870715852,0.895661896959697,0.32389366601898,2.83333124397605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0.329851300186716,0,0.852449501065388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.04580098949649,2.53007406669196,6.01605492763067,3.33146993609895,0.795285947051099,2.43317435151318,3.11964896641424,3.1042115644759,3.42555664203192,1.83370705696798,13.8432209551166,9.26961106961073,0.324547393654683,0.348259474598534,0.531831842075461,0,0,0,1.19257444420023,2.58070378531837,0.694281003215189,0,1.25849830862972,1.6507082516404,0.835979866147242,1.03366703667732,1.42306505074684,0.33472061276467,4.43112248820062,8.36299316290364,3.41686880567437,1.83831540172934,2.43042584364528,0.446498641420399,0.673588117878509,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,5.66922267785295,5.96366342034382,4.05217637326655,1.58891016975863,1.43418310374407,6.02936249737207,5.04609840128076,2.1349799145941,3.45334567784024,0.311211035399766,2.15537075311501,3.43269996538263,1.66493170409425,4.03323147135999,0.234321431833797,5.93104145977609,6.27519003698894,4.63290909710583,4.46251094846307,4.04682360920329,4.9157782345787,2.24569588380383,3.19369225010597,1.75653827998801,1.18800285728205,2.22540236350701,3.64064544775211,5.74894513452991,1.17835279767846,0.875829639103749,0.554128230968366,2.19488810440419,4.90380473278431,2.40380894250555,4.3104229600808,0.89694817844431,2.34913127700424,3.81477422087211,3.00091096084402,4.01904864029912,2.31876486041066,5.21127197728451,2.19409231913646,4.57953924257634,3.5340728394176,4.51044503347267,0.80823028409406,4.26011511019937,8.06016785821122,5.4259389539356,12.1754337492877,3.54569956768085,7.4569194801141,0,0,0.232387885739037,0.725627385107593,0,0,12.5159625863853,30.2323240950656,17.9575397758225,6.03678306441573,15.1594691150613,2.83936320095625,1.85443159085912,2.89213235860178,3.639701100169,4.57546832594053,4.74541238222193,5.66291494272691,3.13954344200554,1.92373578473195,2.21446636387394,7.01208869017229,4.9388881359768,1.47008711385542,0,0,0.590789906681404,0,0.122988438543114,2.40194934417936,4.93876284338815,5.62008766288098,1.80952150340936,1.48141512253647,1.62904152655162,2.07986957055916,8.6598805215164,1.85488647960123,1.52631302506568,0.866198686566443,2.77791307545966,1.14152491340759,0.790204397959275,1.71697232418975,0.246217006087397,1.40402559083543,0.594524649154913,25.3081351764298,4.53551746136921,6.37987937590739,6.44821363460508,3.77824120068151,3.83382679165211,0.492663237895943,0,0.207328115540772,0,0.12624243342638,1.07946420296687,3.4378958300245,3.51652341630141,1.71072446022705,2.98199728839638,7.80891950394185,1.42913216315289,4.70950554250515,2.1798003441664,5.7203862940341,0.775630294546667,7.15312891703765,10.143633030672,3.19125739901845,4.16029747645464,2.57207374262142,1.41849132023278,6.12771011737029,0.857867961948885,1.08524321078289,2.46972101034231,5.5375151329935,1.06617584622764,1.58390374586686,3.91871190177462,6.97226766880235,2.7992437530976,0,0,0,4.31324739884849,5.7430967917057,8.5582143024431,8.54209709338717,5.75333703141074,8.77398719875488,0,0,0,0,0.254094624222463,0,0,1.00509759200609,0.637938751653163,0,0,0,1.34960640891054,3.00102312635806,2.44138521329762,6.03115498439341,6.60187258549499,8.51593041183247,4.80279801470124,2.70851489754947,6.82222512167955,13.4514992680256,1.99267679560631,4.05612170791747,3.73599542212756,7.44044398358414,5.83343820478455,0,0,0,26.6752262872708,31.6227335069944,19.6553690664292,6.20269519546942,2.14846762603287,11.7877239661891,6.27881831352935,4.09365799253363,3.86049410744658,11.8734453155993,4.47208112027701,6.74734556189883,4.68124789278712,2.59627214591811,9.18061989833678,0.241718899183244,8.22076528243468,4.23572549105123,1.60740227430449,3.09554985611419,2.88473712910733,34.7423701938707,27.5714906833805,35.2957396129585,54.0715131217065,12.0328856937878,2.27466768141793,3.40187410553031,9.71621622459627,12.3381802152231,23.0304471912275,46.1554591946465,33.3887917689,56.5131686071533,34.9244617366598,0,0,0.256450125116389,0.656029291399411,0,0.9273691048295,3.29650073346036,2.31026599777646,2.87132768998086,5.20048196829217,12.8547143875328,1.45006077438183,2.7728751080636,3.07007349452259,2.89456802217514,0.751941714077915,1.74020032697074,2.55679882248303,0.534192213880424,7.10725136052206,6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| |||
|short_description=p4@S100A13 | |||
}} |
Latest revision as of 06:43, 17 September 2015
Short description: | p4@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392623, NM_001024212, uc001fcg.2, uc009woh.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.84e-16 | 250 |
epithelial cell | 1.90e-13 | 253 |
vascular associated smooth muscle cell | 5.48e-11 | 32 |
kidney cell | 8.95e-11 | 17 |
kidney epithelial cell | 8.95e-11 | 17 |
smooth muscle cell | 1.45e-10 | 43 |
smooth muscle myoblast | 1.45e-10 | 43 |
muscle precursor cell | 3.33e-10 | 58 |
myoblast | 3.33e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.33e-10 | 58 |
mesodermal cell | 3.90e-10 | 121 |
epithelial cell of nephron | 2.01e-09 | 15 |
fibroblast | 3.06e-09 | 76 |
muscle cell | 4.77e-09 | 55 |
kidney tubule cell | 7.82e-09 | 10 |
nephron tubule epithelial cell | 7.82e-09 | 10 |
kidney cortical cell | 2.35e-07 | 12 |
renal cortical epithelial cell | 2.35e-07 | 12 |
electrically responsive cell | 7.54e-07 | 61 |
electrically active cell | 7.54e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 7.64e-07 | 27 |