FFCP PHASE1:Hg19::chr8:82644741..82644791,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:82644741..82644791,+
|short_description=p2@CHMP4C
|description=CAGE_peak_2_at_CHMP4C_5end
|association_with_transcript=53bp_to_NM_152284,uc003ycl.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=92421 | |EntrezGene=92421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30599 | |HGNC=30599 | ||
|TSSclassifier=strong | |||
|UniProt=Q96CF2 | |UniProt=Q96CF2 | ||
|association_with_transcript=53bp_to_NM_152284,uc003ycl.2_5end | |||
|cluster_id=chr8:82644741..82644791,+ | |||
|coexpression_cluster_id=C2015 | |||
|description=CAGE_peak_2_at_CHMP4C_5end | |||
|id=chr8:82644741..82644791,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.65e-46!254;CL:0002076!3.33e-17!43;CL:0000223!3.86e-17!59;CL:0002251!2.03e-08!21;CL:0000082!5.70e-08!19;CL:0002368!6.41e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.25e-15;42!CL:0002251;7.40e-11;20!CL:0002368;4.25e-09;13!CL:0000082;4.07e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.91e-52,253;CL:0002076,4.71e-20,42;CL:0000223,1.12e-19,58;CL:0002251,6.19e-11,20;CL:0002368,4.59e-09,13;CL:0000082,4.31e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0006595;4.17e-12;86!UBERON:0008947;5.19e-12;29!UBERON:0001041;2.44e-10;30!CL:0000223;3.06e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.77e-36!106;DOID:0050687!4.74e-28!143;DOID:162!1.48e-11!235;DOID:14566!5.04e-11!239;DOID:299!2.48e-09!25;DOID:1749!4.08e-09!14;DOID:0050615!7.42e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:305;1.80e-12;106!DOID:1749;7.29e-12;14!DOID:299;7.93e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.39e-41,106;DOID:0050687,9.97e-29,143;DOID:162,4.03e-12,235;DOID:1749,8.13e-12,14;DOID:14566,2.58e-11,239;DOID:299,6.57e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.22e-30!169;UBERON:0000925!2.22e-30!169;UBERON:0006595!2.22e-30!169;UBERON:0001007!2.80e-24!155;UBERON:0001555!2.80e-24!155;UBERON:0007026!2.80e-24!155;UBERON:0004921!2.95e-23!129;UBERON:0004185!2.95e-23!129;UBERON:0000077!7.56e-21!130;UBERON:0001041!7.11e-19!98;UBERON:0001004!1.65e-17!72;UBERON:0000466!1.30e-15!126;UBERON:0000065!6.90e-15!53;UBERON:0005911!9.24e-15!82;UBERON:0000464!1.69e-14!104;UBERON:0001048!3.08e-14!168;UBERON:0005177!7.98e-14!107;UBERON:0000062!2.90e-13!511;UBERON:0008947!2.06e-12!38;UBERON:0003258!2.06e-12!38;UBERON:0000064!6.20e-12!219;UBERON:0000072!1.91e-11!46;UBERON:0005153!4.76e-11!37;UBERON:0000481!1.35e-10!347;UBERON:0005157!1.35e-10!51;UBERON:0002048!5.86e-09!22;UBERON:0000117!5.86e-09!22;UBERON:0000171!5.86e-09!22;UBERON:0000170!5.86e-09!22;UBERON:0005597!5.86e-09!22;UBERON:0000118!5.86e-09!22;UBERON:0005178!6.69e-09!34;UBERON:0002224!6.69e-09!34;UBERON:0001008!1.17e-08!45;UBERON:0006554!1.95e-08!44;UBERON:0005181!2.37e-08!35;UBERON:0000063!3.11e-08!97;UBERON:0004802!5.70e-08!19;UBERON:0000115!5.70e-08!19;UBERON:0003104!5.83e-08!238;UBERON:0009142!5.83e-08!238;UBERON:0000922!8.52e-08!612;UBERON:0000468!1.55e-07!659;UBERON:0009569!1.78e-07!113;UBERON:0004807!2.21e-07!28;UBERON:0000467!2.40e-07!625;UBERON:0005409!2.75e-07!35;UBERON:0002553!2.82e-07!70;UBERON:0000480!3.19e-07!626;UBERON:0000161!5.43e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;4.66e-12;44!UBERON:0001004;6.96e-11;65!UBERON:0000072;3.09e-10;37!UBERON:0004807;7.28e-10;22!UBERON:0005911;2.21e-09;36!UBERON:0002048;2.53e-09;22!UBERON:0000117;2.53e-09;22!UBERON:0000171;2.53e-09;22!UBERON:0000170;2.53e-09;22!UBERON:0006554;5.51e-09;30!UBERON:0001008;5.51e-09;30!UBERON:0005178;1.17e-08;34!UBERON:0002224;1.17e-08;34!UBERON:0004921;1.90e-08;33!UBERON:0005181;2.29e-08;35!UBERON:0004802;4.07e-08;19!UBERON:0000115;4.07e-08;19!UBERON:0001041;2.70e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.50e-33,160;UBERON:0000925,4.50e-33,160;UBERON:0006595,4.50e-33,160;UBERON:0001007,3.02e-26,145;UBERON:0001555,3.02e-26,145;UBERON:0007026,3.02e-26,145;UBERON:0004921,1.97e-23,118;UBERON:0001004,1.88e-19,74;UBERON:0001041,1.70e-18,87;UBERON:0005911,8.87e-16,82;UBERON:0005177,1.33e-15,101;UBERON:0000065,2.53e-15,54;UBERON:0008947,1.97e-14,38;UBERON:0003258,1.97e-14,38;UBERON:0005153,1.60e-12,37;UBERON:0000072,3.80e-11,47;UBERON:0001008,3.80e-11,48;UBERON:0005157,4.37e-11,47;UBERON:0006554,7.50e-11,47;UBERON:0005178,9.24e-10,34;UBERON:0002224,9.24e-10,34;UBERON:0001048,1.12e-09,160;UBERON:0002048,2.21e-09,22;UBERON:0000117,2.21e-09,22;UBERON:0000171,2.21e-09,22;UBERON:0000170,2.21e-09,22;UBERON:0005597,2.21e-09,22;UBERON:0000118,2.21e-09,22;UBERON:0005181,2.87e-09,35;UBERON:0000161,3.45e-09,36;UBERON:0009569,5.19e-09,112;UBERON:0004802,4.31e-08,19;UBERON:0000115,4.31e-08,19;UBERON:0000166,2.81e-07,22;UBERON:0005631,2.82e-07,14;UBERON:0000158,2.82e-07,14;UBERON:0002530,8.41e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.68600904752263,5.58240934377942,6.334799791775,6.59417445571134,0,0,0,0,0,0,0,0.408001382488506,0,0,0.273748850145768,0.125542639594803,0.534893840235659,0.656804715599566,1.18066171970519,0,0,0.154816123316076,5.51652734687356,2.71085326900425,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.850813354476611,0.221729397462564,1.05401742831751,0.523916301990851,3.64295288292542,3.70784442784429,0,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,1.00416183829401,0.402829317109147,1.52054421143703,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,1.31780417436063,0,3.05265836499774,0,0.12663051166458,0,0,0,0,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,6.95739071387869,1.90922284413584,6.02289650316908,1.09776335516636,0.795178609928912,0.813357600086629,1.7622379352613,1.7662459561294,0.72995471815166,0,0,0,0,0,2.12952240071719,2.52877035117153,1.68707720918437,2.42646740011267,1.52515610864684,3.79632990577755,3.50561401216427,2.15843611637881,3.07797725557112,0,0,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,2.33678033231916,0.514703430895577,1.42675371031213,3.37205259772859,5.73015142746296,6.29601427078001,0.325808305310325,0,0,0.231860809950154,1.40890433082986,1.44366447761074,0,0.951270761172991,1.58040879591855,0,0,0,0,7.49870671894216,7.22323151255096,6.94697976487694,11.3739323832617,12.2066254175864,5.75074018747817,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,3.48613383440118,1.49959486773086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,6.06255142892519,0,3.93107381328584,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,5.21316822788541,17.3112259199485,0,0,0,4.51199612907412,8.70273309279887,2.35304930753057,4.38417673959782,4.53872004239366,0,0.340187410553031,1.72732732881711,0,0.541892875087706,0,5.09752546090077,8.31076008928724,1.56712328305525,0,0,2.05160100093111,1.31205858279882,1.30151357865721,1.44257416306811,0.0915694648183434,0.247528499761764,2.87132768998086,3.90036147621913,0,0,0,0,0,0,0,0,0,12.3963686520734,20.3721471407013,5.74257206225629,18.5118738965656,0,0,0,0,0,0,0.18532421910392,0.715624433709956,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,7.50532479258994,1.34060455107157,2.17781969722645,1.50630081242847,5.59656984472599,8.42357378338128,4.87773168890343,13.0942338117967,0,0,0,0.238231775457789,0,0,0,0,0,0,4.6557641036396,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4040702579644,0,0,0,0.284136146806413,16.7121139316383,6.53322297831805,23.0370526574424,0,0,0,0,0,1.39473591775749,0.276283915531148,6.04638594850262,0,0.123084805461069,0,18.5128803363493,6.62378346299754,0,1.28236427328014,0,0,0,0.463840490809256,0,5.20855522170466,3.76077999983642,2.89999830173917,9.67244310426747,15.255219017566,2.36387681767936,1.37897349296586,0,0,0,0,0,0,0,0.438770794307945,3.48603083260768,10.7356283094525,1.00035336054936,0,4.84184199214926,2.60297168788339,1.4124158349861,7.65602783356607,4.67147726349498,7.99552164027952,0,0,0,0.676786981851542,0,0.167821586975843,0.37950746544837,0,5.4859496777287,5.38668266925187,2.82706142867882,0.649165919226273,1.99052386215701,7.34197785377715,3.66618086960175,0,0,0,0.067401132980677,0,0.234264445725339,0,4.69595085437015,0,0.394584402849391,6.04953580243319,0,0.63186579628488,5.11099626009275,3.11064574191741,1.32930774541437,0.992975867626496,3.13932918407225,7.16834578637753,7.39984819677461,0.693373365065693,2.60339607502696,5.19359706296202,10.2729863764875,0.873633341210151,0.859930162358083,2.90268993867255,6.50494922067051,2.87404099686232,3.68558262655994,0,1.12990370390266,0,0.993573058514948,0.189932387867636,6.84429839571811,5.85159387836196,3.20179492109029,3.19695375331408,4.46680293177729,0.114536596165916,1.88754497648161,12.1006030310046,6.95814199166422,8.48498524620464,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,1.11712960508902,0.916641696046735,1.43574604915363,2.99518500748487,0.429226048136571,1.11585728720936,0.403100834920358,0,13.9795139432945,3.78159275074674,4.94495150286999,3.50498428041761,2.85439696392771,0.508039992394707,0,0,3.53656926623042,1.51293380256957,0.83088067605837,0.449947783103001,1.5476039091159,0.121499113316049,4.36065093879046,1.81253126788156,1.31136470337495,10.4544333154212,0.896436696664224,15.5451309828751,0.714695326373367,0.662091970365432,0.25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| ||
|short_description=p2@CHMP4C | |||
}} | }} |
Latest revision as of 06:34, 19 September 2015
Short description: | p2@CHMP4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHMP4C_5end |
Coexpression cluster: | C2015_small_squamous_amniotic_rectal_malignant_maxillary_oral |
Association with transcript: | 53bp_to_NM_152284, uc003ycl.2_5end |
EntrezGene: | CHMP4C |
HGNC: | 30599 |
UniProt: | Q96CF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.91e-52 | 253 |
endo-epithelial cell | 4.71e-20 | 42 |
endodermal cell | 1.12e-19 | 58 |
epithelial cell of alimentary canal | 6.19e-11 | 20 |
respiratory epithelial cell | 4.59e-09 | 13 |
epithelial cell of lung | 4.31e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.39e-41 | 106 |
cell type cancer | 9.97e-29 | 143 |
cancer | 4.03e-12 | 235 |
squamous cell carcinoma | 8.13e-12 | 14 |
disease of cellular proliferation | 2.58e-11 | 239 |
adenocarcinoma | 6.57e-10 | 25 |