FFCP PHASE1:Hg19::chr19:51143096..51143143,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11511 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BQG1 | |||
|association_with_transcript=-4bp_to_NM_001160328,NM_001160329,uc002psv.2,uc010ycd.1_5end | |||
|cluster_id=chr19:51143096..51143143,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYT3_5end | |||
|id=chr19:51143096..51143143,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.19e-07;6!CL:0000404;3.19e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.67e-08,8;CL:0000540,2.19e-07,6;CL:0000031,2.19e-07,6;CL:0000404,2.19e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.57e-21;82!UBERON:0006215;2.36e-09;3!UBERON:0006241;3.98e-09;3!UBERON:0003057;3.98e-09;3!CL:0000031;3.19e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;1.26e-61;34!UBERON:0003528;2.37e-61;34!UBERON:0002020;2.37e-61;34!UBERON:0001869;1.32e-60;32!UBERON:0002780;2.23e-60;41!UBERON:0001890;2.23e-60;41!UBERON:0002791;3.52e-60;32!UBERON:0002619;2.50e-58;22!UBERON:0000073;2.31e-54;53!UBERON:0002616;2.31e-54;53!UBERON:0001950;2.48e-53;20!UBERON:0000956;7.63e-51;25!UBERON:0000203;7.63e-51;25!UBERON:0000955;2.33e-40;68!UBERON:0001017;1.20e-37;75!UBERON:0001016;1.29e-35;83!UBERON:0002420;1.59e-23;9!UBERON:0007245;1.59e-23;9!UBERON:0010009;1.59e-23;9!UBERON:0010011;1.59e-23;9!UBERON:0000454;1.59e-23;9!UBERON:0000125;2.15e-23;9!UBERON:0002308;2.15e-23;9!UBERON:0000200;3.53e-18;6!UBERON:0009663;4.14e-18;7!UBERON:0002021;1.97e-15;5!UBERON:0001872;2.53e-15;5!UBERON:0001871;3.56e-15;6!UBERON:0000349;1.13e-14;5!UBERON:0004733;2.75e-14;12!UBERON:0002028;2.75e-14;12!UBERON:0007023;6.20e-14;114!UBERON:0011216;1.56e-13;132!UBERON:0001894;3.08e-13;7!UBERON:0004732;4.50e-13;13!UBERON:0002298;4.74e-12;6!UBERON:0000369;1.92e-11;4!UBERON:0002435;1.92e-11;4!UBERON:0000204;1.92e-11;4!UBERON:0002680;2.77e-11;9!UBERON:0001895;2.77e-11;9!UBERON:0002784;1.31e-10;4!UBERON:0001870;6.99e-10;3!UBERON:0000988;1.15e-09;3!UBERON:0002240;3.98e-09;3!UBERON:0005174;3.98e-09;3!UBERON:0001137;3.98e-09;3!UBERON:0010314;6.58e-09;132!UBERON:0005383;8.77e-09;3!UBERON:0005382;8.77e-09;3!UBERON:0002702;3.32e-07;2!UBERON:0001876;3.97e-07;2!UBERON:0002771;5.33e-07;2!UBERON:0002148;5.49e-07;2!UBERON:0006331;5.49e-07;2!UBERON:0009662;5.49e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,1.06748995729705,0.49333509683432,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.397589304964456,0.464775771478074,0.518305275076852,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0,0,0,0.224262168690721,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,5.20559415430487,2.31986643833309,0.502548796003046,1.91381625495949,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.117141414992713,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0,0,0,0.241718899183244,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0.721346064882224,0,0.637705090915289,0,0,0.423347165447766,0,0,0.456469358066384,0,0,0,0,0.201799707191048,1.27753871307098,0,0.307240764308458,0.671028323677248,0.667396566847634,0,0.835218521685727,0,0.270455678475983,0,0,0,0,0.970884173996107,0,0,0,0,0,4.97073823883149,5.06409899077846,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,6.78532922266653,3.8034920246359,5.98841394003583,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0.173624994933292,1.77148277162768,2.05013945663194,1.52581736317083,3.42795705786796,7.68423809279223,3.29078095730959,0,0,0,0,0,0,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0.19606253431774,0.671286347903371,0,0.158936578980379,0,0,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0.741383633679017,1.8795950910982,1.41542379259422,0,3.51396668588009,0,0,0,0.394584402849391,0,3.36680037793539,0.063186579628488,0,0.207376382794494,0.664653872707185,0.661983911750998,0.627865836814451,0,0.284609546029793,0.693373365065693,0,0,0,0,0,0,0,0,0.0969890164884194,2.47117154736201,0.451961481561065,0,0,4.93824208455854,1.36885967914362,0,0.640358984218058,0.39961921916426,0.432271251462318,0.114536596165916,0,0,0.248505071130865,0,0.543616824294456,0.732219924186332,0,0,1.20084057741958,1.09524303113594,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,4.90332262001672,0.482259445395058,1.51293380256957,1.66176135211674,0,0,4.9207140893,0,0.236417121897595,0.157363764404994,0.316801009558219,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0.113312091520126,0,0,5.30060121082357,3.43804764530994,0.513260513652988,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,6.2024772597689,4.02686674176478,4.63206443614049,0,1.88579387612649,4.65723022060376,0,0,0,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0,0.477890301491107,0.449803112163605,0,0,0.265841714557995,0,0.150257608997218,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.926404341482917,0.219284049578707,0.176689145945881,0,0,0,0,0,4.83904526531058,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0.107824811396682,1.10086159299127,0.655257829152084,0.509197589862076,0.850299680406731,1.11542187833102,1.11728983594649,0,0,0,0.352675943690684,0,4.23912885636633,2.8339315265117,6.2257205032289,6.35860729146341,4.78936222821264,7.26151150874288,4.52131807769183,0,0,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,5.40300676947157,4.68646859168308,3.51367554052013,7.54648141307491,4.37579847214576,0,0,0.175871244359621,0,1.07140367175657,1.3451348888753,0,2.04895972216168,0.177404740325278,0,0,4.96179050730871,6.8403684505363,0.236387681767936,0,0.156986185701028,2.82808061848803,0,0,0,0,0.714765441766563,1.42212250559454,1.04617282831313,0,0,0,0,0,0,0,0,0.423387050190929,0,0.62041277132864,0,1.4541206133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| |||
|short_description=p1@SYT3 | |||
}} |
Latest revision as of 12:20, 19 September 2015
Short description: | p1@SYT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYT3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -4bp_to_NM_001160328, NM_001160329, uc002psv.2, uc010ycd.1_5end |
EntrezGene: | SYT3 |
HGNC: | 11511 |
UniProt: | Q9BQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.67e-08 | 8 |
neuron | 2.19e-07 | 6 |
neuroblast | 2.19e-07 | 6 |
electrically signaling cell | 2.19e-07 | 6 |