FFCP PHASE1:Hg19::chr19:46271505..46271575,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=147912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10891 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N196 | |||
|association_with_transcript=0bp_to_AK074826_5end | |||
|cluster_id=chr19:46271505..46271575,- | |||
|description=CAGE_peak_2_at_SIX5_5end | |||
|id=chr19:46271505..46271575,- | |||
|ontology_enrichment_celltype=CL:0000066!2.67e-22!254;CL:0000220!4.67e-15!246;CL:0002321!4.78e-15!248;CL:0000223!3.65e-08!59;CL:1000449!5.66e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000449;6.37e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-19,253;CL:0002321,2.81e-14,250;CL:0000223,1.73e-08,58;CL:1000449,4.31e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.03e-19!238;UBERON:0009142!4.03e-19!238;UBERON:0000481!4.83e-19!347;UBERON:0005177!4.20e-15!107;UBERON:0002100!1.76e-14!216;UBERON:0000483!5.67e-14!309;UBERON:0000119!1.13e-13!312;UBERON:0009569!1.44e-13!113;UBERON:0003914!1.86e-13!118;UBERON:0004119!5.10e-13!169;UBERON:0000925!5.10e-13!169;UBERON:0006595!5.10e-13!169;UBERON:0000475!5.31e-13!365;UBERON:0000477!5.45e-13!286;UBERON:0000468!8.93e-13!659;UBERON:0000466!1.63e-12!126;UBERON:0003103!1.63e-12!69;UBERON:0001048!2.98e-12!168;UBERON:0005172!8.04e-12!55;UBERON:0005173!8.04e-12!55;UBERON:0002417!2.62e-11!61;UBERON:0000916!2.62e-11!61;UBERON:0001007!5.66e-11!155;UBERON:0001555!5.66e-11!155;UBERON:0007026!5.66e-11!155;UBERON:0005256!9.22e-11!143;UBERON:0004111!3.86e-10!241;UBERON:0000077!3.98e-10!130;UBERON:0000464!5.30e-10!104;UBERON:0000467!5.80e-10!625;UBERON:0000480!1.03e-09!626;UBERON:0000922!1.54e-09!612;UBERON:0002050!9.21e-09!605;UBERON:0005423!9.21e-09!605;UBERON:0004921!1.06e-08!129;UBERON:0004185!1.06e-08!129;UBERON:0003064!1.13e-08!37;UBERON:0000923!1.53e-08!604;UBERON:0005291!1.53e-08!604;UBERON:0006598!1.53e-08!604;UBERON:0002532!1.53e-08!604;UBERON:0001008!1.90e-08!45;UBERON:0001041!1.91e-08!98;UBERON:0002113!2.64e-08!27;UBERON:0003918!2.64e-08!27;UBERON:0005095!2.64e-08!27;UBERON:0007687!2.64e-08!27;UBERON:0004876!3.03e-08!20;UBERON:0000490!3.06e-08!138;UBERON:0006554!4.73e-08!44;UBERON:0000080!5.66e-08!18;UBERON:0002120!5.66e-08!18;UBERON:0004875!5.66e-08!18;UBERON:0005721!5.66e-08!18;UBERON:0005754!5.66e-08!18;UBERON:0007297!5.66e-08!18;UBERON:0000489!9.86e-08!32;UBERON:0002553!1.79e-07!70;UBERON:0002530!1.87e-07!59;UBERON:0006555!2.01e-07!17;UBERON:0005103!2.01e-07!17;UBERON:0000083!2.01e-07!17;UBERON:0009201!2.01e-07!17;UBERON:0004819!2.01e-07!17;UBERON:0006553!2.01e-07!17;UBERON:0003074!2.01e-07!17;UBERON:0003060!2.01e-07!17;UBERON:0002365!4.50e-07!31;UBERON:0002330!4.50e-07!31;UBERON:0004211!5.66e-07!16;UBERON:0001285!5.66e-07!16;UBERON:0007684!5.66e-07!16;UBERON:0003220!5.66e-07!16;UBERON:0004208!5.66e-07!16;UBERON:0000025!9.63e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.68e-07;31!UBERON:0002330;1.68e-07;31!UBERON:0006555;6.37e-07;15!UBERON:0004819;6.37e-07;15!UBERON:0001285;6.37e-07;15!UBERON:0007684;6.37e-07;15!UBERON:0005172;6.53e-07;52!UBERON:0005173;6.53e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.65e-14,101;UBERON:0002100,1.05e-13,199;UBERON:0003914,4.41e-13,117;UBERON:0003104,5.81e-13,160;UBERON:0009142,5.81e-13,160;UBERON:0009569,6.72e-13,112;UBERON:0003103,5.91e-12,68;UBERON:0005172,1.65e-11,54;UBERON:0005173,1.65e-11,54;UBERON:0004119,2.65e-11,160;UBERON:0000925,2.65e-11,160;UBERON:0006595,2.65e-11,160;UBERON:0002417,5.15e-11,60;UBERON:0000916,5.15e-11,60;UBERON:0001048,1.28e-10,160;UBERON:0001007,3.97e-09,145;UBERON:0001555,3.97e-09,145;UBERON:0007026,3.97e-09,145;UBERON:0000483,7.30e-09,306;UBERON:0000119,1.45e-08,309;UBERON:0005256,1.46e-08,122;UBERON:0001008,2.43e-08,48;UBERON:0001041,6.07e-08,87;UBERON:0006554,6.10e-08,47;UBERON:0002113,7.92e-08,26;UBERON:0003918,7.92e-08,26;UBERON:0011143,7.92e-08,26;UBERON:0005095,7.92e-08,26;UBERON:0007687,7.92e-08,26;UBERON:0002530,8.60e-08,59;UBERON:0006555,1.45e-07,16;UBERON:0004819,1.45e-07,16;UBERON:0004921,1.59e-07,118;UBERON:0000490,2.03e-07,148;UBERON:0002365,2.28e-07,31;UBERON:0002330,2.28e-07,31;UBERON:0004111,2.32e-07,240;UBERON:0004211,4.31e-07,15;UBERON:0009773,4.31e-07,15;UBERON:0001231,4.31e-07,15;UBERON:0001285,4.31e-07,15;UBERON:0007684,4.31e-07,15;UBERON:0004208,4.31e-07,15;UBERON:0000353,9.26e-07,15;UBERON:0000489,9.37e-07,31 | |||
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| |||
|short_description=p2@SIX5 | |||
}} |
Latest revision as of 19:05, 18 September 2015
Short description: | p2@SIX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SIX5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK074826_5end |
EntrezGene: | SIX5 |
HGNC: | 10891 |
UniProt: | Q8N196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-19 | 253 |
embryonic cell | 2.81e-14 | 250 |
endodermal cell | 1.73e-08 | 58 |
epithelial cell of nephron | 4.31e-07 | 15 |