FFCP PHASE1:Hg19::chr19:3933085..3933103,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27231 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17871 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPI5 | |||
|association_with_transcript=0bp_to_ENST00000168977,NM_170678,uc002lyz.3_5end | |||
|cluster_id=chr19:3933085..3933103,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_4_at_ITGB1BP3_5end | |||
|id=chr19:3933085..3933103,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.34e-25!5;CL:0000147!1.86e-12!14;CL:0000149!7.12e-12!4;CL:0000148!3.35e-08!10;CL:0000541!3.35e-08!10;CL:0000540!3.84e-08!6;CL:0000031!3.84e-08!6;CL:0000404!3.84e-08!6;CL:0002586!8.80e-08!3;CL:0000039!4.27e-07!7;CL:0000586!4.27e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.70e-50;5!CL:0000147;9.37e-18;14!CL:0002321;8.79e-17;15!CL:0000540;1.23e-15;6!CL:0000404;1.23e-15;6!CL:0002586;2.96e-14;3!CL:0000039;1.40e-13;7!CL:0000586;1.40e-13;7!CL:0000149;6.32e-11;4!CL:0000148;1.32e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.45e-50,5;CL:0000147,6.36e-18,14;CL:0000540,1.43e-15,6;CL:0000031,1.43e-15,6;CL:0000404,1.43e-15,6;CL:0002586,1.85e-14,3;CL:0000039,1.46e-13,7;CL:0000586,1.46e-13,7;CL:0000047,7.99e-12,8;CL:0000149,4.45e-11,4;CL:0000148,1.18e-09,10;CL:0000541,1.18e-09,10 | |||
|ontology_enrichment_development_v019=CL:0000031;1.23e-15;6!UBERON:0010227;1.60e-11;1!UBERON:0004140;1.60e-11;1!UBERON:0009117;1.14e-09;10!UBERON:0005564;1.14e-09;10 | |||
|ontology_enrichment_disease=DOID:114!1.95e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!9.41e-11!2;UBERON:0005090!9.41e-11!2;UBERON:0000966!9.69e-10!5;UBERON:0005388!9.69e-10!5;UBERON:0001802!9.69e-10!5;UBERON:0007100!6.89e-08!27;UBERON:0001781!8.80e-08!3;UBERON:0001782!8.80e-08!3;UBERON:0005424!8.80e-08!3;UBERON:0003978!2.66e-07!3;UBERON:0009751!2.66e-07!3;UBERON:0000946!2.66e-07!3;UBERON:0002523!2.66e-07!3;UBERON:0005983!2.66e-07!3;UBERON:0002165!2.66e-07!3;UBERON:0002062!2.66e-07!3;UBERON:0007280!2.66e-07!3;UBERON:0000020!4.84e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.11e-18;5!UBERON:0005388;2.11e-18;5!UBERON:0001802;2.11e-18;5!UBERON:0001781;2.96e-14;3!UBERON:0001782;2.96e-14;3!UBERON:0000922;5.37e-12;49!UBERON:0000473;5.93e-12;8!UBERON:0002079;1.60e-11;1!UBERON:0001389;4.01e-11;1!UBERON:0000026;4.01e-11;1!UBERON:0008784;4.01e-11;1!UBERON:0006058;4.01e-11;1!UBERON:0003663;4.01e-11;1!UBERON:0004256;4.01e-11;1!UBERON:0004708;4.01e-11;1!UBERON:0002101;4.01e-11;1!UBERON:0004709;4.01e-11;1!UBERON:0002529;4.01e-11;1!UBERON:0010538;4.01e-11;1!UBERON:0003661;4.01e-11;1!UBERON:0010890;4.01e-11;1!UBERON:0002471;4.01e-11;1!UBERON:0001383;4.01e-11;1!UBERON:0010758;4.01e-11;1!UBERON:0010707;4.01e-11;1!UBERON:0000978;4.01e-11;1!UBERON:0002103;4.01e-11;1!UBERON:0001665;4.01e-11;1!UBERON:0003823;4.01e-11;1!UBERON:0000154;4.01e-11;1!UBERON:0010709;4.01e-11;1!UBERON:0003135;7.77e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.17e-15,6;UBERON:0005388,1.17e-15,6;UBERON:0001802,1.17e-15,6;UBERON:0001782,1.85e-14,3;UBERON:0005424,1.85e-14,3;UBERON:0000473,6.16e-12,8;UBERON:0002079,1.06e-11,1;UBERON:0005418,4.44e-11,1;UBERON:0001389,4.44e-11,1;UBERON:0000026,4.44e-11,1;UBERON:0008784,4.44e-11,1;UBERON:0006058,4.44e-11,1;UBERON:0003663,4.44e-11,1;UBERON:0004256,4.44e-11,1;UBERON:0004708,4.44e-11,1;UBERON:0002101,4.44e-11,1;UBERON:0004709,4.44e-11,1;UBERON:0002529,4.44e-11,1;UBERON:0010538,4.44e-11,1;UBERON:0003661,4.44e-11,1;UBERON:0010890,4.44e-11,1;UBERON:0002471,4.44e-11,1;UBERON:0001383,4.44e-11,1;UBERON:0004357,4.44e-11,1;UBERON:0004347,4.44e-11,1;UBERON:0005420,4.44e-11,1;UBERON:0005732,4.44e-11,1;UBERON:0010758,4.44e-11,1;UBERON:0010707,4.44e-11,1;UBERON:0000978,4.44e-11,1;UBERON:0002103,4.44e-11,1;UBERON:0001665,4.44e-11,1;UBERON:0003823,4.44e-11,1;UBERON:0000154,4.44e-11,1;UBERON:0010709,4.44e-11,1;UBERON:0005733,4.44e-11,1;UBERON:0005730,4.44e-11,1;UBERON:0001781,4.45e-11,4;UBERON:0003135,7.99e-09,11 | |||
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|short_description=p4@ITGB1BP3 | |||
}} |
Latest revision as of 20:36, 17 September 2015
Short description: | p4@ITGB1BP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ITGB1BP3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000168977, NM_170678, uc002lyz.3_5end |
EntrezGene: | ITGB1BP3 |
HGNC: | 17871 |
UniProt: | Q9NPI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.45e-50 | 5 |
pigment cell | 6.36e-18 | 14 |
neuron | 1.43e-15 | 6 |
neuroblast | 1.43e-15 | 6 |
electrically signaling cell | 1.43e-15 | 6 |
retinal pigment epithelial cell | 1.85e-14 | 3 |
germ line cell | 1.46e-13 | 7 |
germ cell | 1.46e-13 | 7 |
neuronal stem cell | 7.99e-12 | 8 |
visual pigment cell | 4.45e-11 | 4 |
melanocyte | 1.18e-09 | 10 |
melanoblast | 1.18e-09 | 10 |